BLASTX nr result

ID: Coptis24_contig00034674 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034674
         (697 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004147395.1| PREDICTED: uncharacterized protein LOC101205...   186   3e-45
ref|XP_002316748.1| predicted protein [Populus trichocarpa] gi|2...   173   3e-41
emb|CAN79430.1| hypothetical protein VITISV_001819 [Vitis vinifera]   170   3e-40
ref|XP_002269286.1| PREDICTED: uncharacterized protein LOC100260...   169   6e-40
ref|XP_002522293.1| conserved hypothetical protein [Ricinus comm...   164   2e-38

>ref|XP_004147395.1| PREDICTED: uncharacterized protein LOC101205837 [Cucumis sativus]
           gi|449500568|ref|XP_004161133.1| PREDICTED:
           uncharacterized LOC101205837 [Cucumis sativus]
          Length = 213

 Score =  186 bits (473), Expect = 3e-45
 Identities = 103/192 (53%), Positives = 133/192 (69%), Gaps = 5/192 (2%)
 Frame = +1

Query: 61  PTKAITLQQFRTLLSLTHSLMTRVANLRYSKGDYQGSKRAQNIADKLDG--GLSLYKGMF 234
           P+ + +  QF+TL SL HSLM+RVANLR S+GD+ GS+RA+NIA KL+   GLS +  ++
Sbjct: 25  PSLSFSFSQFKTLFSLAHSLMSRVANLRASRGDFAGSQRARNIAQKLERGLGLSFWGSIW 84

Query: 235 SIGWDYLKNYAWRDMGSS--IGMVRDMNRLLQALNELTQLESGKKRAEWVLRNYQSILVS 408
           S+ WDY KNYAWRD+  S     V DMN LL+   EL+QLES   RA WV RNYQS+L  
Sbjct: 85  SLAWDYTKNYAWRDLPFSELYDAVPDMNELLRTFAELSQLESDFARANWVSRNYQSVLRV 144

Query: 409 SESVFRRLLQVFFKSGPLRDLVLMLQRE-AEGDLLRDCLELGSNDLNGVVQIFKDIFVQF 585
           S  +  RLL+VF KSG  R++V  +Q+E  +G LL+DCLELGS DL G+VQI KD+ + F
Sbjct: 145 SNKLLERLLKVFRKSGAWREVVETVQKEVVDGGLLKDCLELGSGDLKGIVQILKDLALNF 204

Query: 586 SSGNQYGRSGDL 621
            S    GRS +L
Sbjct: 205 YSS---GRSNEL 213


>ref|XP_002316748.1| predicted protein [Populus trichocarpa] gi|222859813|gb|EEE97360.1|
           predicted protein [Populus trichocarpa]
          Length = 217

 Score =  173 bits (438), Expect = 3e-41
 Identities = 96/176 (54%), Positives = 127/176 (72%), Gaps = 5/176 (2%)
 Frame = +1

Query: 85  QFRTLLSLTHSLMTRVANLRYSKGDYQGSKRAQNIADKLDGGLSL-YKGM-FSIGWDYLK 258
           Q++TL SL+HSL+TRV+NLR S+GD  GS RA+ IA KL+ GL   + G+ +S+GWDY  
Sbjct: 38  QYKTLFSLSHSLLTRVSNLRASRGDISGSNRAKLIAQKLERGLGFGFWGLSWSVGWDYAI 97

Query: 259 NYAWR--DMGSSIGMVRDMNRLLQALNELTQLESGKKRAEWVLRNYQSILVSSESVFRRL 432
           NYAW   D     G V +MN LL+ L ELT+  S  +RA WV  NY+++L  ++SV RRL
Sbjct: 98  NYAWGHFDYRELYGAVSEMNELLRFLGELTRSGSEIERATWVAGNYKNVLSVAQSVLRRL 157

Query: 433 LQVFFKSGPLRDLVLMLQRE-AEGDLLRDCLELGSNDLNGVVQIFKDIFVQFSSGN 597
           ++VF +SGPL+++V  +QRE  EGDLLRDCLELGSNDL G+VQI KD+  QF S +
Sbjct: 158 VKVFRQSGPLKEVVETVQREVVEGDLLRDCLELGSNDLKGLVQIVKDLASQFYSSS 213


>emb|CAN79430.1| hypothetical protein VITISV_001819 [Vitis vinifera]
          Length = 216

 Score =  170 bits (430), Expect = 3e-40
 Identities = 95/198 (47%), Positives = 133/198 (67%), Gaps = 7/198 (3%)
 Frame = +1

Query: 49  STPSPTKAITLQQFRTLLSLTHSLMTRVANLRYSKGDYQGSKRAQNIADKLDGGLSL--Y 222
           + P+P+ +    Q+RTL+SL HSLMTRVANLR S+GD+ G+  A+ +A +L+ GL L  +
Sbjct: 19  AAPTPSGSFFPSQYRTLVSLGHSLMTRVANLRASRGDHSGAALARAVAARLERGLGLGLW 78

Query: 223 KGMFSIGWDYLKNYAWRDMG--SSIGMVRDMNRLLQALNELTQLESGKKRAEWVLRNYQS 396
             M+S GWDY +NYAW +M        V +M  LL+ + ELT++ S  +RA WV RNYQS
Sbjct: 79  GMMWSTGWDYFRNYAWGEMNWRELNAAVSEMKELLRWVTELTRMNSDAERAAWVGRNYQS 138

Query: 397 ILVSSESVFRRLLQVFFKSGPLRDLVLMLQRE-AEGDLLRDCLELGSNDLNGVVQIFKDI 573
           +L  S S+  +LLQVF +SG LR++V  +++E  EG LLRDCLELGSNDL G++Q+  D+
Sbjct: 139 VLRVSNSMLGKLLQVFRQSGALREVVETVKKEVVEGGLLRDCLELGSNDLKGLMQVLNDL 198

Query: 574 FVQFS--SGNQYGRSGDL 621
             Q S  S +  G + DL
Sbjct: 199 LSQLSSASASASGHTADL 216


>ref|XP_002269286.1| PREDICTED: uncharacterized protein LOC100260527 [Vitis vinifera]
          Length = 216

 Score =  169 bits (427), Expect = 6e-40
 Identities = 95/198 (47%), Positives = 133/198 (67%), Gaps = 7/198 (3%)
 Frame = +1

Query: 49  STPSPTKAITLQQFRTLLSLTHSLMTRVANLRYSKGDYQGSKRAQNIADKLDGGLSL--Y 222
           ++P+P+ +    Q+RTL+SL HSLMTRVANLR S+GD  G+  A+ +A +L+ GL L  +
Sbjct: 19  ASPTPSGSFFPSQYRTLVSLGHSLMTRVANLRASRGDRSGAALARAVAARLERGLGLGLW 78

Query: 223 KGMFSIGWDYLKNYAWRDMG--SSIGMVRDMNRLLQALNELTQLESGKKRAEWVLRNYQS 396
             M+S GWDY +NYAW +M        V +M  LL+ + ELT++ S  +RA WV RNYQS
Sbjct: 79  GMMWSTGWDYFRNYAWGEMNWRELNAAVSEMKELLRWVTELTRMNSDAERAAWVGRNYQS 138

Query: 397 ILVSSESVFRRLLQVFFKSGPLRDLVLMLQRE-AEGDLLRDCLELGSNDLNGVVQIFKDI 573
           +L  S S+  +LLQVF +SG LR++V  +++E  EG LLRDCLELGSNDL G++Q+  D+
Sbjct: 139 VLRVSNSMLGKLLQVFRQSGALREVVETVKKEVVEGGLLRDCLELGSNDLKGLMQVLNDL 198

Query: 574 FVQFS--SGNQYGRSGDL 621
             Q S  S +  G + DL
Sbjct: 199 LSQLSSASASASGHTADL 216


>ref|XP_002522293.1| conserved hypothetical protein [Ricinus communis]
           gi|223538546|gb|EEF40151.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 228

 Score =  164 bits (415), Expect = 2e-38
 Identities = 89/182 (48%), Positives = 128/182 (70%), Gaps = 3/182 (1%)
 Frame = +1

Query: 85  QFRTLLSLTHSLMTRVANLRYSKGDYQGSKRAQNIADKLDGGLSLYKGMFSIGWDYLKNY 264
           Q++T++SL+HSL TRV+NLR ++GD  G+ RA+ IAD+L+ G     G  S+G+DY+KNY
Sbjct: 49  QYKTIISLSHSLFTRVSNLRAARGDIAGASRAKGIADRLEKGFWGLAG--SVGFDYVKNY 106

Query: 265 AWRDMG--SSIGMVRDMNRLLQALNELTQLESGKKRAEWVLRNYQSILVSSESVFRRLLQ 438
           +WRD+      G+V D+N L   L+ELTQ ES  +RA  V RNY +IL  ++SV +R L+
Sbjct: 107 SWRDLNYRELYGVVSDLNELASVLSELTQAESDMQRASLVARNYSNILRIAKSVLQRFLK 166

Query: 439 VFFKSGPLRDLVLMLQRE-AEGDLLRDCLELGSNDLNGVVQIFKDIFVQFSSGNQYGRSG 615
           VF +SG L+++V  +QRE  +G+LLRD LELG+NDL G+V+I KD+  Q  S + Y  + 
Sbjct: 167 VFHQSGALKEVVETVQREVVDGELLRDSLELGTNDLKGLVRILKDLASQSYSTSDYYDTD 226

Query: 616 DL 621
           DL
Sbjct: 227 DL 228


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