BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034663
         (524 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAL34928.1|AC079037_1 Putative PPR-repeat protein [Oryza sati...    77   5e-13
gb|EAZ15116.1| hypothetical protein OsJ_30529 [Oryza sativa Japo...    77   5e-13
gb|EEC66478.1| hypothetical protein OsI_32564 [Oryza sativa Indi...    77   5e-13
ref|XP_002268526.2| PREDICTED: pentatricopeptide repeat-containi...    69   3e-10
emb|CBI24516.3| unnamed protein product [Vitis vinifera]               69   3e-10

>gb|AAL34928.1|AC079037_1 Putative PPR-repeat protein [Oryza sativa] gi|31429883|gb|AAP51872.1|
            hypothetical protein LOC_Os10g02650 [Oryza sativa
            Japonica Group]
          Length = 949

 Score = 77.0 bits (188), Expect(2) = 5e-13
 Identities = 47/139 (33%), Positives = 75/139 (53%), Gaps = 20/139 (14%)
 Frame = +1

Query: 70   TEEFIYIAEKLMKDITRNGVVFDLHFYNAVINGYCRAHMLRDAYLYVELMQNDGLNAKHM 249
            TEE I +A+ +++D+  NG+V DLH YN +ING CRA+ + DAY  + +M   G+   H+
Sbjct: 699  TEEMIQVAQGIIQDLEENGMVPDLHIYNGMINGLCRANKMDDAYSLLSVMDQTGILPNHV 758

Query: 250  TYRAHTTWSNWS--------SYTAINNMSETGCLPDKITQHSYRRS------MQEWES-- 381
            TY   T   N          +    N+++  GC+ DKIT +++ +       M+E  S  
Sbjct: 759  TY---TILMNNQIRLGDINHAIQLFNSLNSDGCVFDKITYNTFIKGLSLAGRMKEALSFL 815

Query: 382  ----S*GLIPSKVSYERLL 426
                  G +PSK SY++L+
Sbjct: 816  LMMHKRGFVPSKASYDKLM 834



 Score = 21.9 bits (45), Expect(2) = 5e-13
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +3

Query: 468 FKEMLL*NYRPRLHNYNRL 524
           F++ML   Y PR  NY  L
Sbjct: 850 FEDMLFQGYTPRYANYTSL 868


>gb|EAZ15116.1| hypothetical protein OsJ_30529 [Oryza sativa Japonica Group]
          Length = 906

 Score = 77.0 bits (188), Expect(2) = 5e-13
 Identities = 47/139 (33%), Positives = 75/139 (53%), Gaps = 20/139 (14%)
 Frame = +1

Query: 70   TEEFIYIAEKLMKDITRNGVVFDLHFYNAVINGYCRAHMLRDAYLYVELMQNDGLNAKHM 249
            TEE I +A+ +++D+  NG+V DLH YN +ING CRA+ + DAY  + +M   G+   H+
Sbjct: 676  TEEMIQVAQGIIQDLEENGMVPDLHIYNGMINGLCRANKMDDAYSLLSVMDQTGILPNHV 735

Query: 250  TYRAHTTWSNWS--------SYTAINNMSETGCLPDKITQHSYRRS------MQEWES-- 381
            TY   T   N          +    N+++  GC+ DKIT +++ +       M+E  S  
Sbjct: 736  TY---TILMNNQIRLGDINHAIQLFNSLNSDGCVFDKITYNTFIKGLSLAGRMKEALSFL 792

Query: 382  ----S*GLIPSKVSYERLL 426
                  G +PSK SY++L+
Sbjct: 793  LMMHKRGFVPSKASYDKLM 811



 Score = 21.9 bits (45), Expect(2) = 5e-13
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +3

Query: 468 FKEMLL*NYRPRLHNYNRL 524
           F++ML   Y PR  NY  L
Sbjct: 827 FEDMLFQGYTPRYANYTSL 845


>gb|EEC66478.1| hypothetical protein OsI_32564 [Oryza sativa Indica Group]
          Length = 481

 Score = 77.0 bits (188), Expect(2) = 5e-13
 Identities = 47/139 (33%), Positives = 75/139 (53%), Gaps = 20/139 (14%)
 Frame = +1

Query: 70  TEEFIYIAEKLMKDITRNGVVFDLHFYNAVINGYCRAHMLRDAYLYVELMQNDGLNAKHM 249
           TEE I +A+ +++D+  NG+V DLH YN +ING CRA+ + DAY  + +M   G+   H+
Sbjct: 251 TEEMIQVAQGIIQDLEENGMVPDLHIYNGMINGLCRANKMDDAYSLLSVMDQTGILPNHV 310

Query: 250 TYRAHTTWSNWS--------SYTAINNMSETGCLPDKITQHSYRRS------MQEWES-- 381
           TY   T   N          +    N+++  GC+ DKIT +++ +       M+E  S  
Sbjct: 311 TY---TILMNNQIRLGDINHAIQLFNSLNSDGCVFDKITYNTFIKGLSLAGRMKEALSFL 367

Query: 382 ----S*GLIPSKVSYERLL 426
                 G +PSK SY++L+
Sbjct: 368 LMMHKRGFVPSKASYDKLM 386



 Score = 21.9 bits (45), Expect(2) = 5e-13
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +3

Query: 468 FKEMLL*NYRPRLHNYNRL 524
           F++ML   Y PR  NY  L
Sbjct: 402 FEDMLFQGYTPRYANYTSL 420


>ref|XP_002268526.2| PREDICTED: pentatricopeptide repeat-containing protein At5g62370-like
            [Vitis vinifera]
          Length = 1101

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 45/154 (29%), Positives = 74/154 (48%), Gaps = 17/154 (11%)
 Frame = +1

Query: 28   LMPEEHKRRISCKFTEEFIYIAEKLMKDITRNGVVFDLHFYNAVINGYCRAHMLRDAYLY 207
            ++P E+          +  Y A  LM+ I  +  + +L+ YN +I+G+CRA+M++DAY +
Sbjct: 768  VIPRENNLSFPRGSPRKIKYFALNLMQKIKGSSFMPNLYLYNGIISGFCRANMIQDAYNH 827

Query: 208  VELMQNDGLNAKHMTY----RAHTTWSNWSSYTAI-NNMSETGCLPDKITQHSYRR---- 360
             ELMQ +G+    +T+      HT +        + N M+  G  PD IT ++  +    
Sbjct: 828  FELMQTEGVCPNQVTFTILINGHTRFGEIDHAIGLFNKMNADGLAPDGITYNALIKGLCK 887

Query: 361  --------SMQEWESS*GLIPSKVSYERLLGACC 438
                    S+       GL P+K SYE+LL   C
Sbjct: 888  AGRLLDALSVSHTMHKRGLFPNKSSYEKLLKCLC 921


>emb|CBI24516.3| unnamed protein product [Vitis vinifera]
          Length = 970

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 45/154 (29%), Positives = 74/154 (48%), Gaps = 17/154 (11%)
 Frame = +1

Query: 28   LMPEEHKRRISCKFTEEFIYIAEKLMKDITRNGVVFDLHFYNAVINGYCRAHMLRDAYLY 207
            ++P E+          +  Y A  LM+ I  +  + +L+ YN +I+G+CRA+M++DAY +
Sbjct: 648  VIPRENNLSFPRGSPRKIKYFALNLMQKIKGSSFMPNLYLYNGIISGFCRANMIQDAYNH 707

Query: 208  VELMQNDGLNAKHMTY----RAHTTWSNWSSYTAI-NNMSETGCLPDKITQHSYRR---- 360
             ELMQ +G+    +T+      HT +        + N M+  G  PD IT ++  +    
Sbjct: 708  FELMQTEGVCPNQVTFTILINGHTRFGEIDHAIGLFNKMNADGLAPDGITYNALIKGLCK 767

Query: 361  --------SMQEWESS*GLIPSKVSYERLLGACC 438
                    S+       GL P+K SYE+LL   C
Sbjct: 768  AGRLLDALSVSHTMHKRGLFPNKSSYEKLLKCLC 801