BLASTX nr result

ID: Coptis24_contig00034660 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034660
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27547.3| unnamed protein product [Vitis vinifera]               68   9e-10
ref|XP_002266601.1| PREDICTED: ABC transporter C family member 3...    68   9e-10
ref|XP_004169512.1| PREDICTED: LOW QUALITY PROTEIN: ABC transpor...    64   1e-08
ref|XP_004135511.1| PREDICTED: ABC transporter C family member 3...    64   1e-08
ref|XP_002515003.1| multidrug resistance-associated protein 2, 6...    64   2e-08

>emb|CBI27547.3| unnamed protein product [Vitis vinifera]
          Length = 1363

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 40/109 (36%), Positives = 55/109 (50%), Gaps = 5/109 (4%)
 Frame = +1

Query: 1   KWPLVLIFWGLFXXXXXXXXXXXYLLAALKSKR----FVNYVLQANFSEFVS-VPLYILL 165
           +WPL+L  W +F           YL+  LK       + ++V QA   +F S +PL+ILL
Sbjct: 109 RWPLILTSWWVFSSILSSLSVSVYLVTRLKILTLPDFWPDFVPQATIDDFASLIPLWILL 168

Query: 166 CYGALCFNFTQEVQDIEQPLLHKXXXXXXXXXXXYSSAGISSQLIFRWL 312
           C+  L FN  ++  D+E PLL             YSSAGI S+L F WL
Sbjct: 169 CFNVLPFNCGKKRSDLEHPLLESEGGNLSHGVDPYSSAGIWSKLTFLWL 217


>ref|XP_002266601.1| PREDICTED: ABC transporter C family member 3-like [Vitis vinifera]
          Length = 1462

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 40/109 (36%), Positives = 55/109 (50%), Gaps = 5/109 (4%)
 Frame = +1

Query: 1   KWPLVLIFWGLFXXXXXXXXXXXYLLAALKSKR----FVNYVLQANFSEFVS-VPLYILL 165
           +WPL+L  W +F           YL+  LK       + ++V QA   +F S +PL+ILL
Sbjct: 122 RWPLILTSWWVFSSILSSLSVSVYLVTRLKILTLPDFWPDFVPQATIDDFASLIPLWILL 181

Query: 166 CYGALCFNFTQEVQDIEQPLLHKXXXXXXXXXXXYSSAGISSQLIFRWL 312
           C+  L FN  ++  D+E PLL             YSSAGI S+L F WL
Sbjct: 182 CFNVLPFNCGKKRSDLEHPLLESEGGNLSHGVDPYSSAGIWSKLTFLWL 230


>ref|XP_004169512.1| PREDICTED: LOW QUALITY PROTEIN: ABC transporter C family member
           3-like [Cucumis sativus]
          Length = 1444

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 34/103 (33%), Positives = 51/103 (49%)
 Frame = +1

Query: 4   WPLVLIFWGLFXXXXXXXXXXXYLLAALKSKRFVNYVLQANFSEFVSVPLYILLCYGALC 183
           WPLVL  W  F           YLL  LKS  F +++ +A   +FVS  L  ++C  AL 
Sbjct: 91  WPLVLTLWWGFSCFYGLCASIIYLLTRLKSMEFPHFLPKATIVDFVSFTLSFIICCTALT 150

Query: 184 FNFTQEVQDIEQPLLHKXXXXXXXXXXXYSSAGISSQLIFRWL 312
            N+++   D+E+ LL K           + S G+ S++ F+WL
Sbjct: 151 VNYSKRHNDLEKSLLQKDNDCSSEDGGGFISPGLWSRITFQWL 193


>ref|XP_004135511.1| PREDICTED: ABC transporter C family member 3-like [Cucumis sativus]
          Length = 1444

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 34/103 (33%), Positives = 51/103 (49%)
 Frame = +1

Query: 4   WPLVLIFWGLFXXXXXXXXXXXYLLAALKSKRFVNYVLQANFSEFVSVPLYILLCYGALC 183
           WPLVL  W  F           YLL  LKS  F +++ +A   +FVS  L  ++C  AL 
Sbjct: 91  WPLVLTLWWGFSCFYGLCASIIYLLTRLKSMEFPHFLPKATIVDFVSFTLSFIICCTALT 150

Query: 184 FNFTQEVQDIEQPLLHKXXXXXXXXXXXYSSAGISSQLIFRWL 312
            N+++   D+E+ LL K           + S G+ S++ F+WL
Sbjct: 151 VNYSKRHNDLEKSLLQKDNDCSSEDGGGFISPGLWSRITFQWL 193


>ref|XP_002515003.1| multidrug resistance-associated protein 2, 6 (mrp2, 6),
           abc-transoprter, putative [Ricinus communis]
           gi|223546054|gb|EEF47557.1| multidrug
           resistance-associated protein 2, 6 (mrp2, 6),
           abc-transoprter, putative [Ricinus communis]
          Length = 1464

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 36/105 (34%), Positives = 53/105 (50%), Gaps = 1/105 (0%)
 Frame = +1

Query: 1   KWPLVLIFWGLFXXXXXXXXXXXYLLAALKSKRFVNYVLQANFSEFVSVPLYILLCYGAL 180
           KWPLVLI W +F           Y +    S +  N + + N  EF+S P  ILLC  AL
Sbjct: 121 KWPLVLILWWVFSCIMYSASVSIYFITHFSSIQLPNPLPKPNIVEFISFPFSILLCCLAL 180

Query: 181 CFNFTQEV-QDIEQPLLHKXXXXXXXXXXXYSSAGISSQLIFRWL 312
            F+ +  +   ++QPLL +           +++AGI SQ+ F+WL
Sbjct: 181 RFSCSTRIGTGLKQPLLQEERKRVLKDSSSFTTAGIWSQITFQWL 225


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