BLASTX nr result
ID: Coptis24_contig00034660
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00034660 (314 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI27547.3| unnamed protein product [Vitis vinifera] 68 9e-10 ref|XP_002266601.1| PREDICTED: ABC transporter C family member 3... 68 9e-10 ref|XP_004169512.1| PREDICTED: LOW QUALITY PROTEIN: ABC transpor... 64 1e-08 ref|XP_004135511.1| PREDICTED: ABC transporter C family member 3... 64 1e-08 ref|XP_002515003.1| multidrug resistance-associated protein 2, 6... 64 2e-08 >emb|CBI27547.3| unnamed protein product [Vitis vinifera] Length = 1363 Score = 67.8 bits (164), Expect = 9e-10 Identities = 40/109 (36%), Positives = 55/109 (50%), Gaps = 5/109 (4%) Frame = +1 Query: 1 KWPLVLIFWGLFXXXXXXXXXXXYLLAALKSKR----FVNYVLQANFSEFVS-VPLYILL 165 +WPL+L W +F YL+ LK + ++V QA +F S +PL+ILL Sbjct: 109 RWPLILTSWWVFSSILSSLSVSVYLVTRLKILTLPDFWPDFVPQATIDDFASLIPLWILL 168 Query: 166 CYGALCFNFTQEVQDIEQPLLHKXXXXXXXXXXXYSSAGISSQLIFRWL 312 C+ L FN ++ D+E PLL YSSAGI S+L F WL Sbjct: 169 CFNVLPFNCGKKRSDLEHPLLESEGGNLSHGVDPYSSAGIWSKLTFLWL 217 >ref|XP_002266601.1| PREDICTED: ABC transporter C family member 3-like [Vitis vinifera] Length = 1462 Score = 67.8 bits (164), Expect = 9e-10 Identities = 40/109 (36%), Positives = 55/109 (50%), Gaps = 5/109 (4%) Frame = +1 Query: 1 KWPLVLIFWGLFXXXXXXXXXXXYLLAALKSKR----FVNYVLQANFSEFVS-VPLYILL 165 +WPL+L W +F YL+ LK + ++V QA +F S +PL+ILL Sbjct: 122 RWPLILTSWWVFSSILSSLSVSVYLVTRLKILTLPDFWPDFVPQATIDDFASLIPLWILL 181 Query: 166 CYGALCFNFTQEVQDIEQPLLHKXXXXXXXXXXXYSSAGISSQLIFRWL 312 C+ L FN ++ D+E PLL YSSAGI S+L F WL Sbjct: 182 CFNVLPFNCGKKRSDLEHPLLESEGGNLSHGVDPYSSAGIWSKLTFLWL 230 >ref|XP_004169512.1| PREDICTED: LOW QUALITY PROTEIN: ABC transporter C family member 3-like [Cucumis sativus] Length = 1444 Score = 64.3 bits (155), Expect = 1e-08 Identities = 34/103 (33%), Positives = 51/103 (49%) Frame = +1 Query: 4 WPLVLIFWGLFXXXXXXXXXXXYLLAALKSKRFVNYVLQANFSEFVSVPLYILLCYGALC 183 WPLVL W F YLL LKS F +++ +A +FVS L ++C AL Sbjct: 91 WPLVLTLWWGFSCFYGLCASIIYLLTRLKSMEFPHFLPKATIVDFVSFTLSFIICCTALT 150 Query: 184 FNFTQEVQDIEQPLLHKXXXXXXXXXXXYSSAGISSQLIFRWL 312 N+++ D+E+ LL K + S G+ S++ F+WL Sbjct: 151 VNYSKRHNDLEKSLLQKDNDCSSEDGGGFISPGLWSRITFQWL 193 >ref|XP_004135511.1| PREDICTED: ABC transporter C family member 3-like [Cucumis sativus] Length = 1444 Score = 64.3 bits (155), Expect = 1e-08 Identities = 34/103 (33%), Positives = 51/103 (49%) Frame = +1 Query: 4 WPLVLIFWGLFXXXXXXXXXXXYLLAALKSKRFVNYVLQANFSEFVSVPLYILLCYGALC 183 WPLVL W F YLL LKS F +++ +A +FVS L ++C AL Sbjct: 91 WPLVLTLWWGFSCFYGLCASIIYLLTRLKSMEFPHFLPKATIVDFVSFTLSFIICCTALT 150 Query: 184 FNFTQEVQDIEQPLLHKXXXXXXXXXXXYSSAGISSQLIFRWL 312 N+++ D+E+ LL K + S G+ S++ F+WL Sbjct: 151 VNYSKRHNDLEKSLLQKDNDCSSEDGGGFISPGLWSRITFQWL 193 >ref|XP_002515003.1| multidrug resistance-associated protein 2, 6 (mrp2, 6), abc-transoprter, putative [Ricinus communis] gi|223546054|gb|EEF47557.1| multidrug resistance-associated protein 2, 6 (mrp2, 6), abc-transoprter, putative [Ricinus communis] Length = 1464 Score = 63.5 bits (153), Expect = 2e-08 Identities = 36/105 (34%), Positives = 53/105 (50%), Gaps = 1/105 (0%) Frame = +1 Query: 1 KWPLVLIFWGLFXXXXXXXXXXXYLLAALKSKRFVNYVLQANFSEFVSVPLYILLCYGAL 180 KWPLVLI W +F Y + S + N + + N EF+S P ILLC AL Sbjct: 121 KWPLVLILWWVFSCIMYSASVSIYFITHFSSIQLPNPLPKPNIVEFISFPFSILLCCLAL 180 Query: 181 CFNFTQEV-QDIEQPLLHKXXXXXXXXXXXYSSAGISSQLIFRWL 312 F+ + + ++QPLL + +++AGI SQ+ F+WL Sbjct: 181 RFSCSTRIGTGLKQPLLQEERKRVLKDSSSFTTAGIWSQITFQWL 225