BLASTX nr result

ID: Coptis24_contig00034649 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034649
         (1136 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633531.1| PREDICTED: putative disease resistance prote...   365   9e-99
ref|XP_002269779.2| PREDICTED: putative disease resistance prote...   364   3e-98
ref|XP_002297751.1| cc-nbs-lrr resistance protein [Populus trich...   353   4e-95
ref|XP_002513078.1| leucine-rich repeat-containing protein, puta...   351   2e-94
ref|XP_003634900.1| PREDICTED: uncharacterized protein LOC100854...   328   2e-87

>ref|XP_003633531.1| PREDICTED: putative disease resistance protein RGA3-like [Vitis
            vinifera]
          Length = 961

 Score =  365 bits (938), Expect = 9e-99
 Identities = 194/386 (50%), Positives = 252/386 (65%), Gaps = 8/386 (2%)
 Frame = -3

Query: 1134 PLRVGAPGSKILITTRSQIVSKIMMTSHVISLQGLADDDCWSLFKKSAFRKTNPDDITPN 955
            PLR GA GSKI++TTRS  VS +M T     L+GL+DDDCWSLFK+ AF   N D   P 
Sbjct: 189  PLRAGATGSKIIVTTRSGRVSSVMGTMPPRHLEGLSDDDCWSLFKQIAFENGNAD-AHPE 247

Query: 954  LLSIGKEIVGKCKGSPLVAKTLGSLLNSVMNEEQWKAILRSEIWDFQEDESDILPALRLS 775
            L+ IGKEI+ KC+G PL  KT+G LL     E +W+ IL+S++WDF+EDE++ILPALRLS
Sbjct: 248  LVRIGKEILKKCRGLPLAVKTIGGLLYLETEEYEWEMILKSDLWDFEEDENEILPALRLS 307

Query: 774  YQCLPSHLKQCFAYCAVFPKGYKFDKEKLVLFWIAQGFILPKAGRRMEDVGSDYFDNLMN 595
            Y  LP HLKQCF +C+VFPK Y F+KE LVL WIA+GF+L K  + +ED+GSDYFD L+ 
Sbjct: 308  YNHLPEHLKQCFVFCSVFPKDYNFEKETLVLLWIAEGFVLAKGRKHLEDLGSDYFDELLL 367

Query: 594  RSFFQEAPADSNTSPRYLMHDLIHNLAKFVSGDECFGMEVGDESHISRNVRHLSFLKGEV 415
            RSFFQ +    N+S  ++MHDL+H+LA++++GD CF +E G    IS   RH + L    
Sbjct: 368  RSFFQRSKI--NSSKFFVMHDLVHDLAQYLAGDLCFRLEEGKSQSISERARHAAVLHNTF 425

Query: 414  SESM-YGALYRSRNLRTIL-------TSSELRYPLHDNPFTLFAKMNCLRVLDLSMAKIH 259
               + + AL  + NLRT++       + +     LHD    L   + CLRVLDLS   + 
Sbjct: 426  KSGVTFEALGTTTNLRTVILLHGNERSETPKAIVLHD----LLPSLRCLRVLDLSHIAVE 481

Query: 258  ELPSSIGNLKHLRYLDLSMTHIKTLNKTVCRLLSLQTLKLNECKELLSLPKHLISLTNLR 79
            E+P  +G LKHLRYL+LS T IK L  +VC L +LQ+L L  C  L  LP  +  L NLR
Sbjct: 482  EIPDMVGRLKHLRYLNLSSTRIKMLPPSVCTLYNLQSLILMNCNNLKGLPIDMKKLLNLR 541

Query: 78   HLDLEKNLRLISMPPGMGRLTGLQTL 1
            HL+L     LI MPP +G LT L+TL
Sbjct: 542  HLNLTGCWHLICMPPQIGELTCLRTL 567


>ref|XP_002269779.2| PREDICTED: putative disease resistance protein RGA3-like [Vitis
            vinifera]
          Length = 1091

 Score =  364 bits (934), Expect = 3e-98
 Identities = 193/386 (50%), Positives = 252/386 (65%), Gaps = 8/386 (2%)
 Frame = -3

Query: 1134 PLRVGAPGSKILITTRSQIVSKIMMTSHVISLQGLADDDCWSLFKKSAFRKTNPDDITPN 955
            PLR GA GSKI++TTRS  VS +M T     L+GL+DDDCWSLFK+ AF   N D   P 
Sbjct: 282  PLRAGATGSKIIVTTRSGRVSSVMGTMPPRHLEGLSDDDCWSLFKQIAFENRNAD-AHPE 340

Query: 954  LLSIGKEIVGKCKGSPLVAKTLGSLLNSVMNEEQWKAILRSEIWDFQEDESDILPALRLS 775
            L+ IG+EI+ KC+G PL  KT+G LL    +E +W+ IL+S++WDF+EDE+ ILPALRLS
Sbjct: 341  LVRIGEEILKKCRGLPLAVKTIGGLLYLETDEYEWEMILKSDLWDFEEDENGILPALRLS 400

Query: 774  YQCLPSHLKQCFAYCAVFPKGYKFDKEKLVLFWIAQGFILPKAGRRMEDVGSDYFDNLMN 595
            Y  LP HLKQCF +C+VFPK Y F+KE LVL WIA+GF+L K  + +ED+GSDYFD L+ 
Sbjct: 401  YNHLPEHLKQCFVFCSVFPKDYNFEKETLVLLWIAEGFVLAKGRKHLEDLGSDYFDELLL 460

Query: 594  RSFFQEAPADSNTSPRYLMHDLIHNLAKFVSGDECFGMEVGDESHISRNVRHLSFLKGEV 415
            RSFFQ   +  N+S  ++MHDL+H+LA++++GD CF +E G    IS   RH + L    
Sbjct: 461  RSFFQR--SKFNSSKFFVMHDLVHDLAQYLAGDLCFRLEEGKSQSISERARHAAVLHNTF 518

Query: 414  SESM-YGALYRSRNLRTIL-------TSSELRYPLHDNPFTLFAKMNCLRVLDLSMAKIH 259
               + + AL  + NLRT++       + +     LHD    L   + CLRVLDLS   + 
Sbjct: 519  KSGVTFEALGTTTNLRTVILLHGNERSETPKAIVLHD----LLPTLRCLRVLDLSHIAVE 574

Query: 258  ELPSSIGNLKHLRYLDLSMTHIKTLNKTVCRLLSLQTLKLNECKELLSLPKHLISLTNLR 79
            E+P  +G LKHLRYL+LS T IK L  +VC L +LQ+L L  C  L  LP  +  L NLR
Sbjct: 575  EIPDMVGRLKHLRYLNLSSTRIKMLPPSVCTLYNLQSLILMNCNNLKGLPNDMKKLLNLR 634

Query: 78   HLDLEKNLRLISMPPGMGRLTGLQTL 1
            HL+L     LI MPP +G LT L+TL
Sbjct: 635  HLNLTGCWHLICMPPQIGELTCLRTL 660


>ref|XP_002297751.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222845009|gb|EEE82556.1| cc-nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 1093

 Score =  353 bits (906), Expect = 4e-95
 Identities = 188/379 (49%), Positives = 253/379 (66%), Gaps = 1/379 (0%)
 Frame = -3

Query: 1134 PLRVGAPGSKILITTRSQIVSKIMMTSHVISLQGLADDDCWSLFKKSAFRKTNPDDITPN 955
            P R GA GSKI++TTRS+ V+ I  T     L+GL+++DCW LFK+ AF   N +D   N
Sbjct: 293  PFRAGASGSKIIVTTRSEKVASITGTFPPFRLEGLSENDCWLLFKQRAFIDGN-EDAHQN 351

Query: 954  LLSIGKEIVGKCKGSPLVAKTLGSLLNSVMNEEQWKAILRSEIWDFQEDESDILPALRLS 775
            L+ IGKEI+ KC G PL AKTLG LL+S     +W+ IL+S++WD + +E++ILPALRLS
Sbjct: 352  LVPIGKEILKKCGGLPLAAKTLGGLLHSTTEVYEWEMILKSDLWDLEVEENEILPALRLS 411

Query: 774  YQCLPSHLKQCFAYCAVFPKGYKFDKEKLVLFWIAQGFILPKAGRRMEDVGSDYFDNLMN 595
            Y  LP+HLKQCF YC++FPK + FD+EKLVL W+A+GF++ K  R +EDV S YF +L+ 
Sbjct: 412  YNHLPAHLKQCFIYCSIFPKDHNFDEEKLVLLWMAEGFVISKGRRCLEDVASGYFHDLLL 471

Query: 594  RSFFQEAPADSNTSP-RYLMHDLIHNLAKFVSGDECFGMEVGDESHISRNVRHLSFLKGE 418
            RSFFQ     S T+P +++MHDLIH+LA+FV+G+ CF ++V     I   VRH S L  +
Sbjct: 472  RSFFQR----SKTNPSKFVMHDLIHDLAQFVAGESCFTLDVKKLQDIGEKVRHSSVLVNK 527

Query: 417  VSESMYGALYRSRNLRTILTSSELRYPLHDNPFTLFAKMNCLRVLDLSMAKIHELPSSIG 238
                 + A   S++LRT+L     R P    P  L   + CLR LDL  + I ELP  +G
Sbjct: 528  SESVPFEAFRTSKSLRTMLLL--CREPRAKVPHDLILSLRCLRSLDLCYSAIKELPDLMG 585

Query: 237  NLKHLRYLDLSMTHIKTLNKTVCRLLSLQTLKLNECKELLSLPKHLISLTNLRHLDLEKN 58
            NL+H+R+LDLS T I+ L +++C L +LQTL L  CK L +LP     L NLRHL+L   
Sbjct: 586  NLRHIRFLDLSHTSIRVLPESICSLYNLQTLVLINCKNLHALPGDTNHLVNLRHLNLTGC 645

Query: 57   LRLISMPPGMGRLTGLQTL 1
             +LISMPP +G+LT LQ L
Sbjct: 646  GQLISMPPDIGKLTSLQRL 664


>ref|XP_002513078.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
            gi|223548089|gb|EEF49581.1| leucine-rich
            repeat-containing protein, putative [Ricinus communis]
          Length = 1096

 Score =  351 bits (901), Expect = 2e-94
 Identities = 189/385 (49%), Positives = 254/385 (65%), Gaps = 7/385 (1%)
 Frame = -3

Query: 1134 PLRVGAPGSKILITTRSQIVSKIMMTSHVISLQGLADDDCWSLFKKSAFRKTNPDDITPN 955
            P RVG  GSKI++TTR++ V+ IM T     L  L+DDDCW LFK+ AF     +   PN
Sbjct: 291  PFRVGTMGSKIIVTTRNEKVASIMGTFRPHHLDFLSDDDCWLLFKQRAF-VDGDETAHPN 349

Query: 954  LLSIGKEIVGKCKGSPLVAKTLGSLLNSVMNEEQWKAILRSEIWDFQEDESDILPALRLS 775
            L+ IGKEIV KC+G PL AKTLG LL++     +W  IL+S +W+ +E++++ILPALRLS
Sbjct: 350  LVPIGKEIVKKCRGLPLAAKTLGGLLHAKTEVSEWGMILQSHLWELEEEKNEILPALRLS 409

Query: 774  YQCLPSHLKQCFAYCAVFPKGYKFDKEKLVLFWIAQGFILPKAGRRMEDVGSDYFDNLMN 595
            Y  LP+HLKQCF +C++FPK ++FDKE LVL W+A+GF+ PK  RR+EDV SDYFD+L+ 
Sbjct: 410  YNQLPAHLKQCFVFCSIFPKDHEFDKEDLVLLWMAEGFVHPKGRRRLEDVASDYFDDLLL 469

Query: 594  RSFFQEAPADSNTSPRYLMHDLIHNLAKFVSGDECFGMEVGDESHISRNVRHLSFLKGEV 415
            RSFFQ++  + +    ++MHDLIH+LA+ V+G+ CF +E      I  NVRH S    + 
Sbjct: 470  RSFFQQSKTNLS---NFVMHDLIHDLAESVAGEICFRLEGEKLQDIPENVRHTSVSVDKC 526

Query: 414  SESMYGALYRSRNLRTIL-----TSSELR--YPLHDNPFTLFAKMNCLRVLDLSMAKIHE 256
               +Y AL+  + LRT+L     TS E+     LHD    L + + CLR LD+S   I +
Sbjct: 527  KSVIYEALHMKKGLRTMLLLCSETSREVSNVKVLHD----LISSLKCLRSLDMSHIAIKD 582

Query: 255  LPSSIGNLKHLRYLDLSMTHIKTLNKTVCRLLSLQTLKLNECKELLSLPKHLISLTNLRH 76
            LP S+G+L H+RYL+LS T IK L  ++C L +LQTL L  C + L+LPK    L NLRH
Sbjct: 583  LPGSVGDLMHMRYLNLSYTEIKELPDSICNLCNLQTLILVGCNKFLTLPKCTKDLVNLRH 642

Query: 75   LDLEKNLRLISMPPGMGRLTGLQTL 1
            L+L     L SMPP  G+LT LQ L
Sbjct: 643  LNLTGCWHLKSMPPSFGKLTSLQRL 667


>ref|XP_003634900.1| PREDICTED: uncharacterized protein LOC100854556 [Vitis vinifera]
          Length = 2204

 Score =  328 bits (841), Expect = 2e-87
 Identities = 178/389 (45%), Positives = 252/389 (64%), Gaps = 11/389 (2%)
 Frame = -3

Query: 1134 PLRVGAPGSKILITTRSQIVSKIMMTSHVISLQGLADDDCWSLFKKSAFRKTNPDDITPN 955
            PLR G PGSK++ITTR+  V+ +  T     LQ L++DDC ++F + A    N  +  P+
Sbjct: 306  PLRAGGPGSKVIITTRNMGVASLTRTVSPYPLQELSNDDCRAVFAQHALGARN-FEAHPH 364

Query: 954  LLSIGKEIVGKCKGSPLVAKTLGSLLNSVMNEEQWKAILRSEIWDFQEDESDILPALRLS 775
            +  IG+E+V +C+G PLVAK LG +L + +N E W  IL+S+IWD  E++S +LPAL+LS
Sbjct: 365  VKIIGEEMVNRCRGLPLVAKALGGILRNELNHEAWDDILKSKIWDLPEEKSGVLPALKLS 424

Query: 774  YQCLPSHLKQCFAYCAVFPKGYKFDKEKLVLFWIAQGFILPKAGRRMEDVGSDYFDNLMN 595
            Y  LPSHLKQCFAYCA+FPKGY+F K++L+L W+ +GF+  K  +RMED+GS YF  L++
Sbjct: 425  YHHLPSHLKQCFAYCAIFPKGYEFKKDELILLWMGEGFLQTKGKKRMEDLGSKYFSELLS 484

Query: 594  RSFFQEAPADSNTSPRYLMHDLIHNLAKFVSGDECFGME--VGDESHISRNVRHLSFLKG 421
            RSFFQ++   S+  PR++MHDLIH+LA+ ++G+  F +E  + +  +I +  RHLSF++ 
Sbjct: 485  RSFFQQS---SDVMPRFMMHDLIHDLAQSIAGNVSFNLEDKLENNENIFQKARHLSFIR- 540

Query: 420  EVSE--SMYGALYRSRNLRTILT-------SSELRYPLHDNPFTLFAKMNCLRVLDLSMA 268
            + +E    +  + + + LRT L           L +        L  +M CLRVL LS  
Sbjct: 541  QANEIFKKFEVVDKGKYLRTFLALPISVSFMKSLSFITTKVTHDLLMEMKCLRVLSLSGY 600

Query: 267  KIHELPSSIGNLKHLRYLDLSMTHIKTLNKTVCRLLSLQTLKLNECKELLSLPKHLISLT 88
            K+ ELPSSI NL HLRYL+L  + IK L  +V  L +LQTL L +C  L  +P  + +L 
Sbjct: 601  KMSELPSSIDNLSHLRYLNLCRSSIKRLPNSVGHLYNLQTLILRDCWSLTEMPVGMGNLI 660

Query: 87   NLRHLDLEKNLRLISMPPGMGRLTGLQTL 1
            NLRHLD+    +L  MPP MG LT LQTL
Sbjct: 661  NLRHLDIAGTSQLEEMPPRMGCLTNLQTL 689


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