BLASTX nr result

ID: Coptis24_contig00034637 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034637
         (407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38644.3| unnamed protein product [Vitis vinifera]              181   5e-44
emb|CAN76472.1| hypothetical protein VITISV_008044 [Vitis vinifera]   181   5e-44
ref|XP_002266214.1| PREDICTED: ceramide kinase-like [Vitis vinif...   173   1e-41
ref|XP_003523893.1| PREDICTED: ceramide kinase-like [Glycine max]     160   8e-38
ref|XP_002510994.1| ceramide kinase, putative [Ricinus communis]...   159   3e-37

>emb|CBI38644.3| unnamed protein product [Vitis vinifera]
          Length = 614

 Score =  181 bits (459), Expect = 5e-44
 Identities = 84/118 (71%), Positives = 100/118 (84%)
 Frame = -2

Query: 355 SVLPNGGGCLLGRDSEMYRFTVHGYQKSKKQPSLCVLATYTFGHKDLQTCQAWVDQVDAL 176
           SVL N GGCL+  +SEMYRFTVHG Q+SK +PSL VLA YTFGHKDLQ C  WV++++AL
Sbjct: 91  SVLSNAGGCLIRHESEMYRFTVHGVQRSKTRPSLLVLAVYTFGHKDLQMCHMWVNRINAL 150

Query: 175 ISKDFRRPKNILVFVHPLSGKGNGCRIWESVAPIFSCAKVKTKVTLTQRAGHAFDVMA 2
           +  +  RPK++LVFVHPLSGKG+GCR W++VAPIFS AKVKTKV +TQRAGHAFDVMA
Sbjct: 151 LKMETGRPKSLLVFVHPLSGKGSGCRTWQTVAPIFSHAKVKTKVIVTQRAGHAFDVMA 208


>emb|CAN76472.1| hypothetical protein VITISV_008044 [Vitis vinifera]
          Length = 332

 Score =  181 bits (459), Expect = 5e-44
 Identities = 84/118 (71%), Positives = 100/118 (84%)
 Frame = -2

Query: 355 SVLPNGGGCLLGRDSEMYRFTVHGYQKSKKQPSLCVLATYTFGHKDLQTCQAWVDQVDAL 176
           SVL N GGCL+  +SEMYRFTVHG Q+SK +PSL VLA YTFGHKDLQ C  WV++++AL
Sbjct: 91  SVLSNAGGCLIRHESEMYRFTVHGVQRSKTRPSLLVLAVYTFGHKDLQMCHMWVNRINAL 150

Query: 175 ISKDFRRPKNILVFVHPLSGKGNGCRIWESVAPIFSCAKVKTKVTLTQRAGHAFDVMA 2
           +  +  RPK++LVFVHPLSGKG+GCR W++VAPIFS AKVKTKV +TQRAGHAFDVMA
Sbjct: 151 LKMETGRPKSLLVFVHPLSGKGSGCRTWQTVAPIFSHAKVKTKVIVTQRAGHAFDVMA 208


>ref|XP_002266214.1| PREDICTED: ceramide kinase-like [Vitis vinifera]
          Length = 622

 Score =  173 bits (438), Expect = 1e-41
 Identities = 84/128 (65%), Positives = 100/128 (78%), Gaps = 10/128 (7%)
 Frame = -2

Query: 355 SVLPNGGGCLLGRDSE----------MYRFTVHGYQKSKKQPSLCVLATYTFGHKDLQTC 206
           SVL N GGCL+  +SE          MYRFTVHG Q+SK +PSL VLA YTFGHKDLQ C
Sbjct: 89  SVLSNAGGCLIRHESEVIVFLVLSDLMYRFTVHGVQRSKTRPSLLVLAVYTFGHKDLQMC 148

Query: 205 QAWVDQVDALISKDFRRPKNILVFVHPLSGKGNGCRIWESVAPIFSCAKVKTKVTLTQRA 26
             WV++++AL+  +  RPK++LVFVHPLSGKG+GCR W++VAPIFS AKVKTKV +TQRA
Sbjct: 149 HMWVNRINALLKMETGRPKSLLVFVHPLSGKGSGCRTWQTVAPIFSHAKVKTKVIVTQRA 208

Query: 25  GHAFDVMA 2
           GHAFDVMA
Sbjct: 209 GHAFDVMA 216


>ref|XP_003523893.1| PREDICTED: ceramide kinase-like [Glycine max]
          Length = 614

 Score =  160 bits (406), Expect = 8e-38
 Identities = 76/119 (63%), Positives = 94/119 (78%), Gaps = 1/119 (0%)
 Frame = -2

Query: 355 SVLPNGGGCLL-GRDSEMYRFTVHGYQKSKKQPSLCVLATYTFGHKDLQTCQAWVDQVDA 179
           S LP    CLL G+D +MY FTVHG+ ++K QPS C+L  YTFGHK+L TCQ WV+Q++A
Sbjct: 95  SSLPPATECLLLGQDIKMYSFTVHGFIRNKNQPSQCILVEYTFGHKNLPTCQMWVNQLNA 154

Query: 178 LISKDFRRPKNILVFVHPLSGKGNGCRIWESVAPIFSCAKVKTKVTLTQRAGHAFDVMA 2
            +  +  RPKN+LVFVHP SGKGNGCR WE+VAPIFS AKV+TKV +T+RAG AFDVM+
Sbjct: 155 SLKHEVGRPKNLLVFVHPRSGKGNGCRTWEAVAPIFSRAKVETKVIVTERAGEAFDVMS 213


>ref|XP_002510994.1| ceramide kinase, putative [Ricinus communis]
           gi|223550109|gb|EEF51596.1| ceramide kinase, putative
           [Ricinus communis]
          Length = 423

 Score =  159 bits (401), Expect = 3e-37
 Identities = 78/118 (66%), Positives = 92/118 (77%), Gaps = 3/118 (2%)
 Frame = -2

Query: 346 PNGGGCLLGR---DSEMYRFTVHGYQKSKKQPSLCVLATYTFGHKDLQTCQAWVDQVDAL 176
           PN G  LL R   DSEM+RFTVHG QKS+ QP L VL  YTFGHKDLQTC  WV+++ A 
Sbjct: 102 PNVGKYLLSRKSHDSEMHRFTVHGVQKSQTQPCLWVLTAYTFGHKDLQTCHIWVNRIKAS 161

Query: 175 ISKDFRRPKNILVFVHPLSGKGNGCRIWESVAPIFSCAKVKTKVTLTQRAGHAFDVMA 2
           +  +  RPKN+LVFV+P SGK +GCR WE+VAPIFS A+V+TKV +TQRAGHAFDVMA
Sbjct: 162 LKIEVERPKNLLVFVNPRSGKAHGCRTWETVAPIFSRAEVETKVVVTQRAGHAFDVMA 219


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