BLASTX nr result

ID: Coptis24_contig00034624 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034624
         (307 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517554.1| signal transducer, putative [Ricinus communi...   171   6e-41
ref|XP_002281013.1| PREDICTED: root phototropism protein 3 [Viti...   171   6e-41
ref|XP_002303269.1| predicted protein [Populus trichocarpa] gi|2...   170   1e-40
ref|XP_002336081.1| predicted protein [Populus trichocarpa] gi|2...   167   6e-40
ref|XP_002298121.1| predicted protein [Populus trichocarpa] gi|2...   167   6e-40

>ref|XP_002517554.1| signal transducer, putative [Ricinus communis]
           gi|223543186|gb|EEF44718.1| signal transducer, putative
           [Ricinus communis]
          Length = 428

 Score =  171 bits (433), Expect = 6e-41
 Identities = 86/104 (82%), Positives = 95/104 (91%), Gaps = 3/104 (2%)
 Frame = -3

Query: 305 PPEKESISCNFLLRLLRTANMVGVEPTYRIDLEKRISWQLDQASLKELMIPSFSHTCGTV 126
           PPEK+SI CNFLLRLLRTANMVGVEPTYR +LEKRISWQLDQASLKELMIPSFSHTCGT+
Sbjct: 108 PPEKDSIPCNFLLRLLRTANMVGVEPTYRAELEKRISWQLDQASLKELMIPSFSHTCGTL 167

Query: 125 LDVELVLHLVRRFINMDDITKT---GAALVKVAKLVDSYLAEAA 3
           LDVEL++ LVRRF+N+D+  K+   GAALVKVAKLVD YLAEAA
Sbjct: 168 LDVELMIRLVRRFVNLDEAAKSGGGGAALVKVAKLVDCYLAEAA 211


>ref|XP_002281013.1| PREDICTED: root phototropism protein 3 [Vitis vinifera]
           gi|297743368|emb|CBI36235.3| unnamed protein product
           [Vitis vinifera]
          Length = 433

 Score =  171 bits (433), Expect = 6e-41
 Identities = 83/101 (82%), Positives = 92/101 (91%)
 Frame = -3

Query: 305 PPEKESISCNFLLRLLRTANMVGVEPTYRIDLEKRISWQLDQASLKELMIPSFSHTCGTV 126
           PPEK+SI CNFLLRLLRTANMVGVEPTYR +LE RISWQLDQASLKELMIPSF HTC T+
Sbjct: 105 PPEKDSIPCNFLLRLLRTANMVGVEPTYRAELESRISWQLDQASLKELMIPSFCHTCATL 164

Query: 125 LDVELVLHLVRRFINMDDITKTGAALVKVAKLVDSYLAEAA 3
           LDVELV+ LV+RF+NMD   K+GAAL+KVAKL+DSYLAEAA
Sbjct: 165 LDVELVMRLVKRFVNMDAAAKSGAALIKVAKLIDSYLAEAA 205


>ref|XP_002303269.1| predicted protein [Populus trichocarpa] gi|222840701|gb|EEE78248.1|
           predicted protein [Populus trichocarpa]
          Length = 409

 Score =  170 bits (431), Expect = 1e-40
 Identities = 82/101 (81%), Positives = 93/101 (92%)
 Frame = -3

Query: 305 PPEKESISCNFLLRLLRTANMVGVEPTYRIDLEKRISWQLDQASLKELMIPSFSHTCGTV 126
           PPEK+SI CNFLLRLLR ANMVGVEPTYR +LEK ISWQLDQASLKELMIPSFSHTCGT+
Sbjct: 86  PPEKDSIPCNFLLRLLRIANMVGVEPTYRAELEKMISWQLDQASLKELMIPSFSHTCGTL 145

Query: 125 LDVELVLHLVRRFINMDDITKTGAALVKVAKLVDSYLAEAA 3
           LDVEL++ LV RF+N+D++ K+ AAL+KVAKLVDSYLAEAA
Sbjct: 146 LDVELIIRLVGRFVNLDEVAKSDAALIKVAKLVDSYLAEAA 186


>ref|XP_002336081.1| predicted protein [Populus trichocarpa] gi|222871395|gb|EEF08526.1|
           predicted protein [Populus trichocarpa]
          Length = 438

 Score =  167 bits (424), Expect = 6e-40
 Identities = 79/101 (78%), Positives = 93/101 (92%)
 Frame = -3

Query: 305 PPEKESISCNFLLRLLRTANMVGVEPTYRIDLEKRISWQLDQASLKELMIPSFSHTCGTV 126
           PPEK+SI C+FLLRLLR ANMV VEP YR +LEKRISWQLDQASLKE+MIPSFSHTCGT+
Sbjct: 109 PPEKDSIPCSFLLRLLRIANMVSVEPAYRAELEKRISWQLDQASLKEIMIPSFSHTCGTL 168

Query: 125 LDVELVLHLVRRFINMDDITKTGAALVKVAKLVDSYLAEAA 3
           LDVEL++ LVR F+N+D++ K+G+AL+KVAKLVDSYLAEAA
Sbjct: 169 LDVELIIRLVRSFVNLDEVAKSGSALIKVAKLVDSYLAEAA 209


>ref|XP_002298121.1| predicted protein [Populus trichocarpa] gi|222845379|gb|EEE82926.1|
           predicted protein [Populus trichocarpa]
          Length = 340

 Score =  167 bits (424), Expect = 6e-40
 Identities = 79/101 (78%), Positives = 93/101 (92%)
 Frame = -3

Query: 305 PPEKESISCNFLLRLLRTANMVGVEPTYRIDLEKRISWQLDQASLKELMIPSFSHTCGTV 126
           PPEK+SI C+FLLRLLR ANMV VEP YR +LEKRISWQLDQASLKE+MIPSFSHTCGT+
Sbjct: 83  PPEKDSIPCSFLLRLLRIANMVSVEPAYRAELEKRISWQLDQASLKEIMIPSFSHTCGTL 142

Query: 125 LDVELVLHLVRRFINMDDITKTGAALVKVAKLVDSYLAEAA 3
           LDVEL++ LVR F+N+D++ K+G+AL+KVAKLVDSYLAEAA
Sbjct: 143 LDVELIIRLVRSFVNLDEVAKSGSALIKVAKLVDSYLAEAA 183


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