BLASTX nr result

ID: Coptis24_contig00034621 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034621
         (668 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323084.1| predicted protein [Populus trichocarpa] gi|2...   157   2e-36
ref|XP_002528696.1| conserved hypothetical protein [Ricinus comm...   155   7e-36
gb|AFK40919.1| unknown [Lotus japonicus]                              150   3e-34
ref|XP_003623633.1| hypothetical protein MTR_7g073370 [Medicago ...   147   2e-33
ref|XP_002267883.1| PREDICTED: uncharacterized protein LOC100260...   144   1e-32

>ref|XP_002323084.1| predicted protein [Populus trichocarpa] gi|222867714|gb|EEF04845.1|
           predicted protein [Populus trichocarpa]
          Length = 224

 Score =  157 bits (397), Expect = 2e-36
 Identities = 88/198 (44%), Positives = 119/198 (60%), Gaps = 5/198 (2%)
 Frame = +2

Query: 5   LWHICKNKPHLRSIWINRIRKRLWVLSITEDTNDKKLMLSLQSLRNXXXXXXXXXXXXXX 184
           LWH  KNKP   +  I  ++++ W + + E  N +  ML++QSLRN              
Sbjct: 26  LWHCFKNKPSQITEGIAALKRKTWFVQLKEGDN-RTGMLAVQSLRNAQMTTILTAATAII 84

Query: 185 XXXCLAAFTNNTYKASHLLQDS-YFGLQSSRILALKYASTSIFLLIGFLCSSMALGCLND 361
               LAA TNN YKASHLL  S +FG QS ++  LK+ S S+FLL+ FLCSSM L  L D
Sbjct: 85  INLALAALTNNNYKASHLLSGSAFFGSQSGKLYVLKFGSASLFLLVSFLCSSMGLAFLID 144

Query: 362 AHILA-AVSRL---PPGYVQGMMERGFLFSFIGHRMFYITLPLLLWLFGPIPMLLSSMAI 529
           A+ L  A SR     P Y Q + ERGF+ + +G+R+  IT PLL W+FGP+P+ LSS+A+
Sbjct: 145 ANFLINAASREFSPSPTYTQTVFERGFMLALMGNRVLCITFPLLAWMFGPVPVALSSVAL 204

Query: 530 VWVLYGIDLADGGFKSEL 583
           VWVL+G+D       SE+
Sbjct: 205 VWVLHGLDFPGKSICSEM 222


>ref|XP_002528696.1| conserved hypothetical protein [Ricinus communis]
           gi|223531868|gb|EEF33685.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 210

 Score =  155 bits (392), Expect = 7e-36
 Identities = 83/187 (44%), Positives = 111/187 (59%), Gaps = 4/187 (2%)
 Frame = +2

Query: 5   LWHICKNKPHLRSIWINRIRKRLWVLSITEDTNDKKLMLSLQSLRNXXXXXXXXXXXXXX 184
           LW   KNKP   +I I+ +R++ W L + E  +DKK ML++QSLRN              
Sbjct: 8   LWQCFKNKPSQTTIGIDSLRRKSWFLEVKEG-DDKKSMLAVQSLRNAQMTTIFTASIAIL 66

Query: 185 XXXCLAAFTNNTYKASHLLQDSYFGLQSSRILALKYASTSIFLLIGFLCSSMALGCLNDA 364
               LAA TNN+Y A HLL  + FG QS ++  LK+ S S FLL  FLCSS+ LG + D+
Sbjct: 67  VNLSLAALTNNSYNAGHLLSSAVFGSQSGKLSVLKFGSASFFLLASFLCSSIGLGFMIDS 126

Query: 365 HILAAVSRLP----PGYVQGMMERGFLFSFIGHRMFYITLPLLLWLFGPIPMLLSSMAIV 532
           + L  ++       P Y Q + ERGF  + IG+R+  IT PLLLWL GP+P+ LSS+A+V
Sbjct: 127 NFLINIASYEFSSWPAYTQTIFERGFFLALIGNRVLCITFPLLLWLLGPLPVGLSSVALV 186

Query: 533 WVLYGID 553
           W LY  D
Sbjct: 187 WGLYEFD 193


>gb|AFK40919.1| unknown [Lotus japonicus]
          Length = 224

 Score =  150 bits (378), Expect = 3e-34
 Identities = 83/199 (41%), Positives = 113/199 (56%), Gaps = 2/199 (1%)
 Frame = +2

Query: 5   LWHICKNKPHLRSIWINRIRKRLWVLSITEDTNDKKLMLSLQSLRNXXXXXXXXXXXXXX 184
           L H  KNKP   +  I+R+R+  W  ++ +   DKK ML++QSLRN              
Sbjct: 26  LCHAIKNKPSRTTYGIDRLRRTAWGENLNQG-EDKKAMLTVQSLRNTLMTTILTATITIL 84

Query: 185 XXXCLAAFTNNTYKASHLLQDSYFGLQSSRILALKYASTSIFLLIGFLCSSMALGCLNDA 364
               LAA TNNTYKASHL    +FG +S ++  LKY S S  LL  FLCSSMA+G L D+
Sbjct: 85  VNLALAALTNNTYKASHLFNSEFFGSKSDKVFVLKYGSASFCLLFSFLCSSMAIGFLIDS 144

Query: 365 HIL--AAVSRLPPGYVQGMMERGFLFSFIGHRMFYITLPLLLWLFGPIPMLLSSMAIVWV 538
           + L  A    L  GY Q ++ERGF  + +G+RM  + +PL+LW+ GP    L+S+A+VWV
Sbjct: 145 NYLMNAYGEFLSGGYTQNILERGFTLALVGNRMLCVAVPLMLWMLGPFAAFLASLALVWV 204

Query: 539 LYGIDLADGGFKSELPQSS 595
           L   D     F  + P S+
Sbjct: 205 LREFD-----FVPQFPHSN 218


>ref|XP_003623633.1| hypothetical protein MTR_7g073370 [Medicago truncatula]
           gi|355498648|gb|AES79851.1| hypothetical protein
           MTR_7g073370 [Medicago truncatula]
          Length = 225

 Score =  147 bits (370), Expect = 2e-33
 Identities = 80/202 (39%), Positives = 118/202 (58%), Gaps = 2/202 (0%)
 Frame = +2

Query: 5   LWHICKNKPHLRSIWINRIRKRLWVLSITEDTNDKKLMLSLQSLRNXXXXXXXXXXXXXX 184
           L +  KNKP   +  I+++R+  W L++ +  +DKK ML +Q++RN              
Sbjct: 26  LCYTIKNKPSRTTYGIDKLRRTTWGLNVNQG-DDKKAMLCVQTMRNTLMTTILTATITIL 84

Query: 185 XXXCLAAFTNNTYKASHLLQDSYFGLQSSRILALKYASTSIFLLIGFLCSSMALGCLNDA 364
               LAA  NN + ASHL    +FG +S  I  LKYAS SI LLI FLCSSMA+G L DA
Sbjct: 85  VNMALAALNNNAFNASHLFSSGFFGSKSDTIFLLKYASASICLLISFLCSSMAIGFLIDA 144

Query: 365 HIL--AAVSRLPPGYVQGMMERGFLFSFIGHRMFYITLPLLLWLFGPIPMLLSSMAIVWV 538
           + L  A    L  GY Q ++E+GF  +F+G+R+F + +PL+LW+ GP+ + L+S+A+V +
Sbjct: 145 NFLMNAYGDFLSGGYTQSVLEKGFTLAFVGNRVFCVAIPLMLWMLGPVLVFLASIALVCL 204

Query: 539 LYGIDLADGGFKSELPQSSTRC 604
           L+  D     +  + PQ   RC
Sbjct: 205 LHEFD-----YVPKFPQGQKRC 221


>ref|XP_002267883.1| PREDICTED: uncharacterized protein LOC100260118 [Vitis vinifera]
          Length = 235

 Score =  144 bits (364), Expect = 1e-32
 Identities = 79/186 (42%), Positives = 110/186 (59%), Gaps = 3/186 (1%)
 Frame = +2

Query: 5   LWHICKNKPHLRSIWINRIRKRLWVLSITEDTNDKKLMLSLQSLRNXXXXXXXXXXXXXX 184
           LWH  K KP L +I +    +R+W+  + +    +  +L++QSLRN              
Sbjct: 26  LWHSMKRKPFLTAIGMETSMRRVWLQKVKQG-GVRMGILAVQSLRNSLQETVLIALTAIA 84

Query: 185 XXXCLAAFTNNTYKASH-LLQDSYFGLQSSRILALKYASTSIFLLIGFLCSSMALGCLND 361
               LAA  NN Y ASH L+  ++FG QS  I  LKY S S+FLL  FLCSSM +GCL D
Sbjct: 85  INTALAALINNAYSASHSLISGTFFGSQSGPIFYLKYVSASLFLLASFLCSSMGVGCLID 144

Query: 362 AHILAAVSR--LPPGYVQGMMERGFLFSFIGHRMFYITLPLLLWLFGPIPMLLSSMAIVW 535
           A IL   S     PGY + +MERGF+F+ +G+RM Y+  PLL W+ GP+ +++SS+A+V 
Sbjct: 145 ASILINASGEFSSPGYAEMIMERGFMFALVGNRMLYMAFPLLSWMLGPVCLVVSSVALVC 204

Query: 536 VLYGID 553
            LY +D
Sbjct: 205 GLYELD 210


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