BLASTX nr result
ID: Coptis24_contig00034617
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00034617 (307 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|BAJ89163.1| predicted protein [Hordeum vulgare subsp. vulgare] 169 3e-40 ref|XP_002312163.1| predicted protein [Populus trichocarpa] gi|2... 168 4e-40 ref|XP_002323585.1| predicted protein [Populus trichocarpa] gi|2... 168 5e-40 gb|ABK96470.1| unknown [Populus trichocarpa x Populus deltoides] 168 5e-40 gb|AAN17504.1| microsomal omega-3 fatty acid desaturase [Betula ... 168 5e-40 >dbj|BAJ89163.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 384 Score = 169 bits (427), Expect = 3e-40 Identities = 71/101 (70%), Positives = 86/101 (85%) Frame = -3 Query: 305 WRISHRTHHQNHGHVENDESWHPLTEKVYKQLPDQSRKLRFSVPFPLFAYPVYLWHRSPG 126 WRISHRTHHQNHGH+E DESWHP+TEKVY++L +++ LRFSVPFPL A+PVYLW+RSPG Sbjct: 131 WRISHRTHHQNHGHIEKDESWHPITEKVYQKLEPRTKTLRFSVPFPLLAFPVYLWYRSPG 190 Query: 125 KQGSHFNPNSDLFHSNERMEVIVSTICWIVMAALLVVASCV 3 K+GSHFNP+SDLF ER +VI+ST CW M ALL+ +CV Sbjct: 191 KEGSHFNPSSDLFTPKERRDVIISTTCWFTMIALLIGMACV 231 >ref|XP_002312163.1| predicted protein [Populus trichocarpa] gi|222851983|gb|EEE89530.1| predicted protein [Populus trichocarpa] Length = 451 Score = 168 bits (426), Expect = 4e-40 Identities = 74/101 (73%), Positives = 86/101 (85%) Frame = -3 Query: 305 WRISHRTHHQNHGHVENDESWHPLTEKVYKQLPDQSRKLRFSVPFPLFAYPVYLWHRSPG 126 WRISHRTHHQNHGHVENDESWHPL EK+Y+ L + +RKLRF++PFP+ AYPVYLW+RSPG Sbjct: 202 WRISHRTHHQNHGHVENDESWHPLPEKIYRSLDNVTRKLRFTLPFPMLAYPVYLWNRSPG 261 Query: 125 KQGSHFNPNSDLFHSNERMEVIVSTICWIVMAALLVVASCV 3 K+GSHF+P+SDLF NER +VI ST CW MAALLV S V Sbjct: 262 KKGSHFHPDSDLFVPNERKDVITSTACWTAMAALLVSLSFV 302 >ref|XP_002323585.1| predicted protein [Populus trichocarpa] gi|222868215|gb|EEF05346.1| predicted protein [Populus trichocarpa] Length = 452 Score = 168 bits (425), Expect = 5e-40 Identities = 72/101 (71%), Positives = 85/101 (84%) Frame = -3 Query: 305 WRISHRTHHQNHGHVENDESWHPLTEKVYKQLPDQSRKLRFSVPFPLFAYPVYLWHRSPG 126 WRISHRTHHQNHGHVE DESWHPL+EK+YK L D ++KLRF+VPFP+ AYP+YLW RSPG Sbjct: 203 WRISHRTHHQNHGHVEKDESWHPLSEKIYKSLDDMTKKLRFTVPFPMLAYPIYLWSRSPG 262 Query: 125 KQGSHFNPNSDLFHSNERMEVIVSTICWIVMAALLVVASCV 3 K GSHF+PNSDLF +E+++VI ST+CW M ALLV S V Sbjct: 263 KTGSHFHPNSDLFVPSEKIDVITSTVCWTAMVALLVGLSFV 303 >gb|ABK96470.1| unknown [Populus trichocarpa x Populus deltoides] Length = 452 Score = 168 bits (425), Expect = 5e-40 Identities = 72/101 (71%), Positives = 85/101 (84%) Frame = -3 Query: 305 WRISHRTHHQNHGHVENDESWHPLTEKVYKQLPDQSRKLRFSVPFPLFAYPVYLWHRSPG 126 WRISHRTHHQNHGHVE DESWHPL+EK+YK L D ++KLRF+VPFP+ AYP+YLW RSPG Sbjct: 203 WRISHRTHHQNHGHVEKDESWHPLSEKIYKSLDDMTKKLRFTVPFPMLAYPIYLWSRSPG 262 Query: 125 KQGSHFNPNSDLFHSNERMEVIVSTICWIVMAALLVVASCV 3 K GSHF+PNSDLF +E+++VI ST+CW M ALLV S V Sbjct: 263 KTGSHFHPNSDLFVPSEKIDVITSTVCWTAMVALLVGLSFV 303 >gb|AAN17504.1| microsomal omega-3 fatty acid desaturase [Betula pendula] Length = 386 Score = 168 bits (425), Expect = 5e-40 Identities = 74/100 (74%), Positives = 86/100 (86%) Frame = -3 Query: 305 WRISHRTHHQNHGHVENDESWHPLTEKVYKQLPDQSRKLRFSVPFPLFAYPVYLWHRSPG 126 WRISHRTHHQNHG+VENDESW PLTEK+YK L +R LRF+VPFPLFAYP+YLW RSPG Sbjct: 135 WRISHRTHHQNHGNVENDESWVPLTEKLYKSLGYSTRLLRFTVPFPLFAYPIYLWSRSPG 194 Query: 125 KQGSHFNPNSDLFHSNERMEVIVSTICWIVMAALLVVASC 6 K+GSHFNP S+LF NER +VI ST+CW +MAALL+ +SC Sbjct: 195 KEGSHFNPYSNLFSPNERKDVITSTLCWSLMAALLIYSSC 234