BLASTX nr result

ID: Coptis24_contig00034617 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034617
         (307 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ89163.1| predicted protein [Hordeum vulgare subsp. vulgare]    169   3e-40
ref|XP_002312163.1| predicted protein [Populus trichocarpa] gi|2...   168   4e-40
ref|XP_002323585.1| predicted protein [Populus trichocarpa] gi|2...   168   5e-40
gb|ABK96470.1| unknown [Populus trichocarpa x Populus deltoides]      168   5e-40
gb|AAN17504.1| microsomal omega-3 fatty acid desaturase [Betula ...   168   5e-40

>dbj|BAJ89163.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 384

 Score =  169 bits (427), Expect = 3e-40
 Identities = 71/101 (70%), Positives = 86/101 (85%)
 Frame = -3

Query: 305 WRISHRTHHQNHGHVENDESWHPLTEKVYKQLPDQSRKLRFSVPFPLFAYPVYLWHRSPG 126
           WRISHRTHHQNHGH+E DESWHP+TEKVY++L  +++ LRFSVPFPL A+PVYLW+RSPG
Sbjct: 131 WRISHRTHHQNHGHIEKDESWHPITEKVYQKLEPRTKTLRFSVPFPLLAFPVYLWYRSPG 190

Query: 125 KQGSHFNPNSDLFHSNERMEVIVSTICWIVMAALLVVASCV 3
           K+GSHFNP+SDLF   ER +VI+ST CW  M ALL+  +CV
Sbjct: 191 KEGSHFNPSSDLFTPKERRDVIISTTCWFTMIALLIGMACV 231


>ref|XP_002312163.1| predicted protein [Populus trichocarpa] gi|222851983|gb|EEE89530.1|
           predicted protein [Populus trichocarpa]
          Length = 451

 Score =  168 bits (426), Expect = 4e-40
 Identities = 74/101 (73%), Positives = 86/101 (85%)
 Frame = -3

Query: 305 WRISHRTHHQNHGHVENDESWHPLTEKVYKQLPDQSRKLRFSVPFPLFAYPVYLWHRSPG 126
           WRISHRTHHQNHGHVENDESWHPL EK+Y+ L + +RKLRF++PFP+ AYPVYLW+RSPG
Sbjct: 202 WRISHRTHHQNHGHVENDESWHPLPEKIYRSLDNVTRKLRFTLPFPMLAYPVYLWNRSPG 261

Query: 125 KQGSHFNPNSDLFHSNERMEVIVSTICWIVMAALLVVASCV 3
           K+GSHF+P+SDLF  NER +VI ST CW  MAALLV  S V
Sbjct: 262 KKGSHFHPDSDLFVPNERKDVITSTACWTAMAALLVSLSFV 302


>ref|XP_002323585.1| predicted protein [Populus trichocarpa] gi|222868215|gb|EEF05346.1|
           predicted protein [Populus trichocarpa]
          Length = 452

 Score =  168 bits (425), Expect = 5e-40
 Identities = 72/101 (71%), Positives = 85/101 (84%)
 Frame = -3

Query: 305 WRISHRTHHQNHGHVENDESWHPLTEKVYKQLPDQSRKLRFSVPFPLFAYPVYLWHRSPG 126
           WRISHRTHHQNHGHVE DESWHPL+EK+YK L D ++KLRF+VPFP+ AYP+YLW RSPG
Sbjct: 203 WRISHRTHHQNHGHVEKDESWHPLSEKIYKSLDDMTKKLRFTVPFPMLAYPIYLWSRSPG 262

Query: 125 KQGSHFNPNSDLFHSNERMEVIVSTICWIVMAALLVVASCV 3
           K GSHF+PNSDLF  +E+++VI ST+CW  M ALLV  S V
Sbjct: 263 KTGSHFHPNSDLFVPSEKIDVITSTVCWTAMVALLVGLSFV 303


>gb|ABK96470.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 452

 Score =  168 bits (425), Expect = 5e-40
 Identities = 72/101 (71%), Positives = 85/101 (84%)
 Frame = -3

Query: 305 WRISHRTHHQNHGHVENDESWHPLTEKVYKQLPDQSRKLRFSVPFPLFAYPVYLWHRSPG 126
           WRISHRTHHQNHGHVE DESWHPL+EK+YK L D ++KLRF+VPFP+ AYP+YLW RSPG
Sbjct: 203 WRISHRTHHQNHGHVEKDESWHPLSEKIYKSLDDMTKKLRFTVPFPMLAYPIYLWSRSPG 262

Query: 125 KQGSHFNPNSDLFHSNERMEVIVSTICWIVMAALLVVASCV 3
           K GSHF+PNSDLF  +E+++VI ST+CW  M ALLV  S V
Sbjct: 263 KTGSHFHPNSDLFVPSEKIDVITSTVCWTAMVALLVGLSFV 303


>gb|AAN17504.1| microsomal omega-3 fatty acid desaturase [Betula pendula]
          Length = 386

 Score =  168 bits (425), Expect = 5e-40
 Identities = 74/100 (74%), Positives = 86/100 (86%)
 Frame = -3

Query: 305 WRISHRTHHQNHGHVENDESWHPLTEKVYKQLPDQSRKLRFSVPFPLFAYPVYLWHRSPG 126
           WRISHRTHHQNHG+VENDESW PLTEK+YK L   +R LRF+VPFPLFAYP+YLW RSPG
Sbjct: 135 WRISHRTHHQNHGNVENDESWVPLTEKLYKSLGYSTRLLRFTVPFPLFAYPIYLWSRSPG 194

Query: 125 KQGSHFNPNSDLFHSNERMEVIVSTICWIVMAALLVVASC 6
           K+GSHFNP S+LF  NER +VI ST+CW +MAALL+ +SC
Sbjct: 195 KEGSHFNPYSNLFSPNERKDVITSTLCWSLMAALLIYSSC 234


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