BLASTX nr result

ID: Coptis24_contig00034605 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034605
         (235 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002446182.1| hypothetical protein SORBIDRAFT_06g003130 [S...    82   6e-14
ref|XP_002446183.1| hypothetical protein SORBIDRAFT_06g003140 [S...    77   1e-12
ref|NP_001176614.1| Os11g0568800 [Oryza sativa Japonica Group] g...    76   2e-12
dbj|BAK07698.1| predicted protein [Hordeum vulgare subsp. vulgare]     76   2e-12
gb|EEC68381.1| hypothetical protein OsI_36527 [Oryza sativa Indi...    76   2e-12

>ref|XP_002446182.1| hypothetical protein SORBIDRAFT_06g003130 [Sorghum bicolor]
           gi|241937365|gb|EES10510.1| hypothetical protein
           SORBIDRAFT_06g003130 [Sorghum bicolor]
          Length = 898

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 43/72 (59%), Positives = 51/72 (70%)
 Frame = -1

Query: 220 NRFRDTLPISIANFSDRLNYLYFGDNAISGNIPSDVGNLVNLMLLSAENNLLTGSIPSGI 41
           N    +LP SIAN S  L YL  G N ISG+IP ++ NLVNL +LS ENNLL+GSIP+ I
Sbjct: 317 NMMNGSLPGSIANLSTSLEYLLLGSNQISGSIPVEISNLVNLTMLSMENNLLSGSIPAMI 376

Query: 40  GTLQNLKILVLS 5
           G LQNL +L LS
Sbjct: 377 GKLQNLFVLNLS 388


>ref|XP_002446183.1| hypothetical protein SORBIDRAFT_06g003140 [Sorghum bicolor]
           gi|241937366|gb|EES10511.1| hypothetical protein
           SORBIDRAFT_06g003140 [Sorghum bicolor]
          Length = 1080

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 41/72 (56%), Positives = 48/72 (66%)
 Frame = -1

Query: 220 NRFRDTLPISIANFSDRLNYLYFGDNAISGNIPSDVGNLVNLMLLSAENNLLTGSIPSGI 41
           N    +LP SI N S  L YL  G N ISG+IP ++ NLVNL +LS ENN L+GSIP  I
Sbjct: 401 NMMNGSLPGSIGNLSTSLEYLLLGSNQISGSIPVEISNLVNLTMLSMENNFLSGSIPDKI 460

Query: 40  GTLQNLKILVLS 5
           G L+NL IL LS
Sbjct: 461 GKLRNLFILNLS 472


>ref|NP_001176614.1| Os11g0568800 [Oryza sativa Japonica Group]
           gi|77551522|gb|ABA94319.1| Leucine Rich Repeat family
           protein, expressed [Oryza sativa Japonica Group]
           gi|255680199|dbj|BAH95342.1| Os11g0568800 [Oryza sativa
           Japonica Group]
          Length = 1133

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 36/71 (50%), Positives = 48/71 (67%)
 Frame = -1

Query: 220 NRFRDTLPISIANFSDRLNYLYFGDNAISGNIPSDVGNLVNLMLLSAENNLLTGSIPSGI 41
           NRF   LP+SI+N S  L YLY   NAISG++P ++GNLV L  L   NN  TG +PS +
Sbjct: 382 NRFEGVLPVSISNLSVYLEYLYLDFNAISGSLPEEIGNLVRLEALLLHNNSFTGILPSSL 441

Query: 40  GTLQNLKILVL 8
           G L+NL++L +
Sbjct: 442 GRLKNLQVLYI 452


>dbj|BAK07698.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1066

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 41/72 (56%), Positives = 48/72 (66%)
 Frame = -1

Query: 220 NRFRDTLPISIANFSDRLNYLYFGDNAISGNIPSDVGNLVNLMLLSAENNLLTGSIPSGI 41
           N    +LPISI N S RL  L FG N ISG IP ++ NLVNL  L  E+N L+GSIPS I
Sbjct: 410 NALNGSLPISIVNLSRRLEDLSFGSNQISGTIPVEISNLVNLTSLRMESNFLSGSIPSTI 469

Query: 40  GTLQNLKILVLS 5
           G L+NL +L LS
Sbjct: 470 GKLRNLYVLNLS 481


>gb|EEC68381.1| hypothetical protein OsI_36527 [Oryza sativa Indica Group]
          Length = 713

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 36/71 (50%), Positives = 48/71 (67%)
 Frame = -1

Query: 220 NRFRDTLPISIANFSDRLNYLYFGDNAISGNIPSDVGNLVNLMLLSAENNLLTGSIPSGI 41
           NRF   LP+SI+N S  L YLY   NAISG++P ++GNLV L  L   NN  TG +PS +
Sbjct: 295 NRFEGVLPVSISNLSVYLEYLYLDFNAISGSLPEEIGNLVRLEALLLHNNSFTGILPSSL 354

Query: 40  GTLQNLKILVL 8
           G L+NL++L +
Sbjct: 355 GRLKNLQVLYI 365


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