BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034595
         (428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28823.3| unnamed protein product [Vitis vinifera]              199   3e-49
ref|XP_003633296.1| PREDICTED: putative pentatricopeptide repeat...   196   1e-48
emb|CAN60147.1| hypothetical protein VITISV_041924 [Vitis vinifera]   195   3e-48
ref|XP_003633297.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...   195   4e-48
ref|XP_002332100.1| predicted protein [Populus trichocarpa] gi|2...   170   1e-40

>emb|CBI28823.3| unnamed protein product [Vitis vinifera]
          Length = 410

 Score =  199 bits (505), Expect = 3e-49
 Identities = 96/141 (68%), Positives = 116/141 (82%)
 Frame = +2

Query: 5   EARKVFEEIPKPCIVSMNSMLDAFGKNGDMESAVLLFENMVVKDVVSWTSAINGFGRNGY 184
           +A +VFEEI +PC+VS N+MLDA GKNGDM SA+ LFE+M  +DVVSWTS INGFGRN  
Sbjct: 148 DACRVFEEISRPCVVSSNAMLDALGKNGDMGSALFLFESMPERDVVSWTSIINGFGRNRC 207

Query: 185 FKEAIRFFVRMLMQESVRSRCVQPNEATFVSVLSSCANSDCAGSLYQGKQIHGYVITNNI 364
           F+EAI+FFV+M+  E VRS  V+PNEATFVSVLSSC N D  G+L+QGKQIHGY+I N +
Sbjct: 208 FEEAIQFFVKMMGHEDVRSCLVKPNEATFVSVLSSCTNLDGVGALHQGKQIHGYIIRNEV 267

Query: 365 ELTVFLETALISMYGKMGCLG 427
           E TVF+ TALI++YGK GCLG
Sbjct: 268 EFTVFMGTALIALYGKTGCLG 288


>ref|XP_003633296.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g10330-like [Vitis vinifera]
          Length = 531

 Score =  196 bits (499), Expect = 1e-48
 Identities = 95/140 (67%), Positives = 115/140 (82%)
 Frame = +2

Query: 5   EARKVFEEIPKPCIVSMNSMLDAFGKNGDMESAVLLFENMVVKDVVSWTSAINGFGRNGY 184
           +A +VFEEI +PC+VS N+MLDA GKNGDM SA+ LFE+M  +DVVSWTS INGFGRN  
Sbjct: 148 DACRVFEEISRPCVVSSNAMLDALGKNGDMGSALFLFESMPERDVVSWTSIINGFGRNRC 207

Query: 185 FKEAIRFFVRMLMQESVRSRCVQPNEATFVSVLSSCANSDCAGSLYQGKQIHGYVITNNI 364
           F+EAI+FFV+M+  E VRS  V+PNEATFVSVLSSC N D  G+L+QGKQIHGY+I N +
Sbjct: 208 FEEAIQFFVKMMGHEDVRSCLVKPNEATFVSVLSSCTNLDGVGALHQGKQIHGYIIRNEV 267

Query: 365 ELTVFLETALISMYGKMGCL 424
           E TVF+ TALI++YGK GCL
Sbjct: 268 EFTVFMGTALIALYGKTGCL 287



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 30/81 (37%), Positives = 50/81 (61%)
 Frame = +2

Query: 59  SMLDAFGKNGDMESAVLLFENMVVKDVVSWTSAINGFGRNGYFKEAIRFFVRMLMQESVR 238
           +++  +GK G +E+A+ +F  MVVK V +W + I+    NG  K+A+  F +M MQ    
Sbjct: 276 ALIALYGKTGCLENAMKIFNGMVVKGVCTWNAMISSLACNGREKQALDLFEKMKMQG--- 332

Query: 239 SRCVQPNEATFVSVLSSCANS 301
              + P+E TFV+V+++CA S
Sbjct: 333 ---LCPDEVTFVAVITACARS 350


>emb|CAN60147.1| hypothetical protein VITISV_041924 [Vitis vinifera]
          Length = 480

 Score =  195 bits (496), Expect = 3e-48
 Identities = 95/140 (67%), Positives = 114/140 (81%)
 Frame = +2

Query: 5   EARKVFEEIPKPCIVSMNSMLDAFGKNGDMESAVLLFENMVVKDVVSWTSAINGFGRNGY 184
           +A  VFEEI +PC+VS N+MLDA GKNGDM SA+ LFE+M  +DVVSWTS INGFGRN  
Sbjct: 56  DACXVFEEISRPCVVSSNAMLDALGKNGDMGSALFLFESMPERDVVSWTSIINGFGRNRC 115

Query: 185 FKEAIRFFVRMLMQESVRSRCVQPNEATFVSVLSSCANSDCAGSLYQGKQIHGYVITNNI 364
           F+EAI+FFV+M+  E VRS  V+PNEATFVSVLSSC N D  G+L+QGKQIHGY+I N +
Sbjct: 116 FEEAIQFFVKMMGHEDVRSCLVKPNEATFVSVLSSCTNLDGVGALHQGKQIHGYIIRNEV 175

Query: 365 ELTVFLETALISMYGKMGCL 424
           E TVF+ TALI++YGK GCL
Sbjct: 176 EFTVFMGTALIALYGKTGCL 195



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 28/81 (34%), Positives = 48/81 (59%)
 Frame = +2

Query: 59  SMLDAFGKNGDMESAVLLFENMVVKDVVSWTSAINGFGRNGYFKEAIRFFVRMLMQESVR 238
           +++  +GK G +E+ + +F  MVVK V +W + I+    NG  K+A+  F +M M     
Sbjct: 184 ALIALYGKTGCLENXMKIFNGMVVKGVCTWNAMISSLACNGREKQALDLFEKMKMXG--- 240

Query: 239 SRCVQPNEATFVSVLSSCANS 301
              + P+E TFV+V+++CA S
Sbjct: 241 ---LCPDEVTFVAVITACARS 258


>ref|XP_003633297.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g10330-like [Vitis
           vinifera]
          Length = 454

 Score =  195 bits (495), Expect = 4e-48
 Identities = 95/140 (67%), Positives = 114/140 (81%)
 Frame = +2

Query: 5   EARKVFEEIPKPCIVSMNSMLDAFGKNGDMESAVLLFENMVVKDVVSWTSAINGFGRNGY 184
           +A  VFEEI +PC+VS N+MLDA GKNGDM SA+ LFE+M  +DVVSWTS INGFGRN  
Sbjct: 120 DACPVFEEISRPCVVSSNAMLDALGKNGDMGSALXLFESMPERDVVSWTSIINGFGRNRC 179

Query: 185 FKEAIRFFVRMLMQESVRSRCVQPNEATFVSVLSSCANSDCAGSLYQGKQIHGYVITNNI 364
           F+EAI+FFV+M+  E VRS  V+PNEATFVSVLSSC N D  G+L+QGKQIHGY+I N +
Sbjct: 180 FEEAIQFFVKMMGHEDVRSCLVKPNEATFVSVLSSCTNLDGVGALHQGKQIHGYIIRNEV 239

Query: 365 ELTVFLETALISMYGKMGCL 424
           E TVF+ TALI++YGK GCL
Sbjct: 240 EFTVFMGTALIALYGKTGCL 259



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 29/81 (35%), Positives = 49/81 (60%)
 Frame = +2

Query: 59  SMLDAFGKNGDMESAVLLFENMVVKDVVSWTSAINGFGRNGYFKEAIRFFVRMLMQESVR 238
           +++  +GK G +E+ + +F  MVVK V +W + I+    NG  K+A+  F +M M    +
Sbjct: 248 ALIALYGKTGCLENVMKIFNGMVVKGVCTWNAMISSLACNGREKQALDLFEKMKM----K 303

Query: 239 SRCVQPNEATFVSVLSSCANS 301
             C  P+E TFV+V+++CA S
Sbjct: 304 GLC--PDEVTFVAVITACARS 322


>ref|XP_002332100.1| predicted protein [Populus trichocarpa] gi|222874920|gb|EEF12051.1|
           predicted protein [Populus trichocarpa]
          Length = 474

 Score =  170 bits (430), Expect = 1e-40
 Identities = 84/141 (59%), Positives = 103/141 (73%)
 Frame = +2

Query: 2   LEARKVFEEIPKPCIVSMNSMLDAFGKNGDMESAVLLFENMVVKDVVSWTSAINGFGRNG 181
           L A KVF+EI  PCIV  N+ LDA+ KNGDM SA  LF++M  +DVVSWTS INGF +NG
Sbjct: 139 LNACKVFDEISHPCIVEYNATLDAYAKNGDMGSACCLFKSMPKRDVVSWTSVINGFAKNG 198

Query: 182 YFKEAIRFFVRMLMQESVRSRCVQPNEATFVSVLSSCANSDCAGSLYQGKQIHGYVITNN 361
            F EAIR F  M++ + V+   V+PNEAT+VSVLSSCAN D  G L  GKQIHGY++ N 
Sbjct: 199 LFGEAIRLFREMMLHDDVKCCFVKPNEATYVSVLSSCANLDERGVLCIGKQIHGYIVRNE 258

Query: 362 IELTVFLETALISMYGKMGCL 424
           + +TVF+ T LI  YGK+GCL
Sbjct: 259 VFVTVFIGTTLIDFYGKVGCL 279



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 25/81 (30%), Positives = 49/81 (60%)
 Frame = +2

Query: 59  SMLDAFGKNGDMESAVLLFENMVVKDVVSWTSAINGFGRNGYFKEAIRFFVRMLMQESVR 238
           +++D +GK G + +A+ ++  M+VK V +W + I+    NG  ++A+  F +M      +
Sbjct: 268 TLIDFYGKVGCLSNAIRVYNQMMVKKVCTWNAIISSLANNGREEQALDMFKKM------K 321

Query: 239 SRCVQPNEATFVSVLSSCANS 301
              + PNE TF++VL++CA +
Sbjct: 322 GEGLCPNEVTFIAVLTACARA 342