BLASTX nr result

ID: Coptis24_contig00034583 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034583
         (569 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003622614.1| TNP2 [Medicago truncatula] gi|355497629|gb|A...    90   2e-16
emb|CAN72364.1| hypothetical protein VITISV_016465 [Vitis vinifera]    89   5e-16
ref|XP_003631713.1| PREDICTED: uncharacterized protein LOC100263...    89   7e-16
ref|XP_004161633.1| PREDICTED: uncharacterized protein LOC101223...    86   3e-15
ref|XP_002265103.2| PREDICTED: uncharacterized protein LOC100241...    86   4e-15

>ref|XP_003622614.1| TNP2 [Medicago truncatula] gi|355497629|gb|AES78832.1| TNP2
           [Medicago truncatula]
          Length = 745

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 58/131 (44%), Positives = 77/131 (58%), Gaps = 1/131 (0%)
 Frame = +1

Query: 1   QDSGVCMKAITTFTSSRKDKNPIDASTKWYGVIEQIIELDYMTFQHVVFYCNWVRVEDKT 180
           Q+SGV + A +   SS KDKNPI AST +YGVIE+I ELDY TF   +F C W+   D  
Sbjct: 128 QNSGVMVVAESMHFSSSKDKNPIMASTPYYGVIEEIWELDYTTFTVPIFKCKWI---DIN 184

Query: 181 NGCKLCPDSNLVMVNLNRLKSVDQYFDEPVILASETSQVFYSEDLRNPNWWVVINSPRRL 360
           NG ++  +    +V+L++      Y DEP I+AS+  QVFY  D  N  W VV+ +  + 
Sbjct: 185 NGVRI-DELGYTLVDLSKA----AYRDEPFIMASQAKQVFYVTDPSNKRWSVVLQT--KN 237

Query: 361 TSRVDE-LDAP 390
           T   DE LD P
Sbjct: 238 THGSDETLDIP 248


>emb|CAN72364.1| hypothetical protein VITISV_016465 [Vitis vinifera]
          Length = 593

 Score = 89.0 bits (219), Expect = 5e-16
 Identities = 47/121 (38%), Positives = 74/121 (61%), Gaps = 1/121 (0%)
 Frame = +1

Query: 1   QDSGVCMKAITTFTSSRKDKNPIDASTKWYGVIEQIIELDYMT-FQHVVFYCNWVRVEDK 177
           Q+SG+C+ ++TTF SS KD++ ID +  +YGV + II L+Y   ++ V+F C+WV+    
Sbjct: 267 QNSGICIDSMTTFRSSSKDESSIDEAIIYYGVFKDIIXLEYHEGYKLVLFKCDWVK---- 322

Query: 178 TNGCKLCPDSNLVMVNLNRLKSVDQYFDEPVILASETSQVFYSEDLRNPNWWVVINSPRR 357
                   +SN+ MVNL+ +   D   DEP ILA    QV YS+D +  NW +V++ P +
Sbjct: 323 --------ESNJRMVNLSNMIRFDLLDDEPFILAKHARQVLYSKDPKVHNWHIVLDVPPK 374

Query: 358 L 360
           +
Sbjct: 375 I 375


>ref|XP_003631713.1| PREDICTED: uncharacterized protein LOC100263769 [Vitis vinifera]
          Length = 1493

 Score = 88.6 bits (218), Expect = 7e-16
 Identities = 52/148 (35%), Positives = 86/148 (58%)
 Frame = +1

Query: 1    QDSGVCMKAITTFTSSRKDKNPIDASTKWYGVIEQIIELDYMTFQHVVFYCNWVRVEDKT 180
            Q+SGV + A T   +S KDKNP+     +YGV+++I +LDY  F+  +F C+WV   D  
Sbjct: 1137 QNSGVSILAGTMQIASSKDKNPVFGELCFYGVVKEIWDLDYNMFRIPIFKCDWV---DNK 1193

Query: 181  NGCKLCPDSNLVMVNLNRLKSVDQYFDEPVILASETSQVFYSEDLRNPNWWVVINSPRRL 360
            NG K+  +    +V+ +++     +  +P ILAS+  QVFY ED  +P W +V++ P + 
Sbjct: 1194 NGIKV-DELGFTLVDFSKI----SHKSDPFILASQAKQVFYVEDQLDPKWSIVLSIPPKD 1248

Query: 361  TSRVDELDAPTDFQSILEDQPNLQPLME 444
             + ++ELD  TD  + +E  P +  + E
Sbjct: 1249 FNNMEELDDFTD--NCMEHHPFISSMPE 1274


>ref|XP_004161633.1| PREDICTED: uncharacterized protein LOC101223491 [Cucumis sativus]
          Length = 288

 Score = 86.3 bits (212), Expect = 3e-15
 Identities = 51/119 (42%), Positives = 69/119 (57%)
 Frame = +1

Query: 1   QDSGVCMKAITTFTSSRKDKNPIDASTKWYGVIEQIIELDYMTFQHVVFYCNWVRVEDKT 180
           Q+SGV + A T   SS KDKNP+     +YGVI++I EL+Y TF   VF C+WV    + 
Sbjct: 125 QNSGVSLVAKTMQVSSSKDKNPVIGDMSFYGVIQEIWELNYNTFNVPVFKCHWV----QN 180

Query: 181 NGCKLCPDSNLVMVNLNRLKSVDQYFDEPVILASETSQVFYSEDLRNPNWWVVINSPRR 357
           NG     +   V+V+LNR+      F    ILAS+  QVF+ EDL +  W VV+  P+R
Sbjct: 181 NGGVRIDELGYVLVDLNRVGHKSDSF----ILASQAKQVFHVEDLSDVRWSVVLTPPQR 235


>ref|XP_002265103.2| PREDICTED: uncharacterized protein LOC100241310 [Vitis vinifera]
          Length = 1456

 Score = 85.9 bits (211), Expect = 4e-15
 Identities = 48/119 (40%), Positives = 71/119 (59%)
 Frame = +1

Query: 1    QDSGVCMKAITTFTSSRKDKNPIDASTKWYGVIEQIIELDYMTFQHVVFYCNWVRVEDKT 180
            Q+SGV + A T   SS KDKNP+     +YG+I +I +LDY  F+  VF CNWV   D  
Sbjct: 746  QNSGVSIVATTMQISSAKDKNPVFGELCFYGIITEIWDLDYTMFRIPVFKCNWV---DNK 802

Query: 181  NGCKLCPDSNLVMVNLNRLKSVDQYFDEPVILASETSQVFYSEDLRNPNWWVVINSPRR 357
            +G K+  +  L +V+  ++     +  +P ILAS+  QVFY +D  +P W VV+++P R
Sbjct: 803  SGIKV-DEFGLTLVDFTKM----AHKSDPFILASQAKQVFYVQDQLDPRWSVVLSTPER 856


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