BLASTX nr result
ID: Coptis24_contig00034580
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00034580 (318 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002279145.2| PREDICTED: uncharacterized protein LOC100256... 125 3e-27 emb|CBI16878.3| unnamed protein product [Vitis vinifera] 125 3e-27 ref|XP_002305970.1| predicted protein [Populus trichocarpa] gi|2... 110 1e-22 gb|ABK94444.1| unknown [Populus trichocarpa] 110 1e-22 ref|NP_001061801.1| Os08g0414200 [Oryza sativa Japonica Group] g... 97 2e-18 >ref|XP_002279145.2| PREDICTED: uncharacterized protein LOC100256612 [Vitis vinifera] Length = 503 Score = 125 bits (315), Expect = 3e-27 Identities = 54/84 (64%), Positives = 63/84 (75%) Frame = +3 Query: 3 QTIPYDSSATDIYVLPDWELTNFRAQPTAAPVCCECLSREPEDLLICCHLCSNRLVHSYC 182 QTIPY S +DI +L D E +F AQ + PVCCEC REPEDLL+ CHLC R VHSYC Sbjct: 420 QTIPYAPSTSDILILADQESPSFGAQSSRLPVCCECRCREPEDLLVSCHLCRIRCVHSYC 479 Query: 183 LDPPLIPWTCNNCRDLRILYQRFH 254 LDPPL+PWTC +C+DLR+LY FH Sbjct: 480 LDPPLLPWTCIHCKDLRMLYHHFH 503 >emb|CBI16878.3| unnamed protein product [Vitis vinifera] Length = 475 Score = 125 bits (315), Expect = 3e-27 Identities = 54/84 (64%), Positives = 63/84 (75%) Frame = +3 Query: 3 QTIPYDSSATDIYVLPDWELTNFRAQPTAAPVCCECLSREPEDLLICCHLCSNRLVHSYC 182 QTIPY S +DI +L D E +F AQ + PVCCEC REPEDLL+ CHLC R VHSYC Sbjct: 392 QTIPYAPSTSDILILADQESPSFGAQSSRLPVCCECRCREPEDLLVSCHLCRIRCVHSYC 451 Query: 183 LDPPLIPWTCNNCRDLRILYQRFH 254 LDPPL+PWTC +C+DLR+LY FH Sbjct: 452 LDPPLLPWTCIHCKDLRMLYHHFH 475 >ref|XP_002305970.1| predicted protein [Populus trichocarpa] gi|222848934|gb|EEE86481.1| predicted protein [Populus trichocarpa] Length = 422 Score = 110 bits (275), Expect = 1e-22 Identities = 47/80 (58%), Positives = 57/80 (71%) Frame = +3 Query: 3 QTIPYDSSATDIYVLPDWELTNFRAQPTAAPVCCECLSREPEDLLICCHLCSNRLVHSYC 182 QTIP+ SS D++ E F A+P+ VCCEC SREPEDLLI CHLC R +HSYC Sbjct: 339 QTIPHASSTVDVFFSMLQEQNKFGAEPSFGSVCCECRSREPEDLLIRCHLCETRCIHSYC 398 Query: 183 LDPPLIPWTCNNCRDLRILY 242 LDPPL PW C +C+DL++LY Sbjct: 399 LDPPLSPWICTHCKDLQMLY 418 >gb|ABK94444.1| unknown [Populus trichocarpa] Length = 482 Score = 110 bits (275), Expect = 1e-22 Identities = 47/80 (58%), Positives = 57/80 (71%) Frame = +3 Query: 3 QTIPYDSSATDIYVLPDWELTNFRAQPTAAPVCCECLSREPEDLLICCHLCSNRLVHSYC 182 QTIP+ SS D++ E F A+P+ VCCEC SREPEDLLI CHLC R +HSYC Sbjct: 399 QTIPHASSTVDVFFSMLQEQNKFGAEPSFGSVCCECRSREPEDLLIRCHLCETRCIHSYC 458 Query: 183 LDPPLIPWTCNNCRDLRILY 242 LDPPL PW C +C+DL++LY Sbjct: 459 LDPPLSPWICTHCKDLQMLY 478 >ref|NP_001061801.1| Os08g0414200 [Oryza sativa Japonica Group] gi|37806204|dbj|BAC99707.1| unknown protein [Oryza sativa Japonica Group] gi|113623770|dbj|BAF23715.1| Os08g0414200 [Oryza sativa Japonica Group] gi|222640548|gb|EEE68680.1| hypothetical protein OsJ_27307 [Oryza sativa Japonica Group] Length = 531 Score = 96.7 bits (239), Expect = 2e-18 Identities = 43/83 (51%), Positives = 58/83 (69%) Frame = +3 Query: 3 QTIPYDSSATDIYVLPDWELTNFRAQPTAAPVCCECLSREPEDLLICCHLCSNRLVHSYC 182 QTIP S++TD ++ D + P+ C +C REPE+LL+ CH+C ++ VHSYC Sbjct: 450 QTIPC-STSTDTFIFDD-RVYGLPESPSGQGACYQCHCREPEELLLSCHVCRSQWVHSYC 507 Query: 183 LDPPLIPWTCNNCRDLRILYQRF 251 LDPPL PWTC +CRDLR+LYQR+ Sbjct: 508 LDPPLTPWTCIHCRDLRMLYQRY 530