BLASTX nr result

ID: Coptis24_contig00034580 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034580
         (318 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279145.2| PREDICTED: uncharacterized protein LOC100256...   125   3e-27
emb|CBI16878.3| unnamed protein product [Vitis vinifera]              125   3e-27
ref|XP_002305970.1| predicted protein [Populus trichocarpa] gi|2...   110   1e-22
gb|ABK94444.1| unknown [Populus trichocarpa]                          110   1e-22
ref|NP_001061801.1| Os08g0414200 [Oryza sativa Japonica Group] g...    97   2e-18

>ref|XP_002279145.2| PREDICTED: uncharacterized protein LOC100256612 [Vitis vinifera]
          Length = 503

 Score =  125 bits (315), Expect = 3e-27
 Identities = 54/84 (64%), Positives = 63/84 (75%)
 Frame = +3

Query: 3   QTIPYDSSATDIYVLPDWELTNFRAQPTAAPVCCECLSREPEDLLICCHLCSNRLVHSYC 182
           QTIPY  S +DI +L D E  +F AQ +  PVCCEC  REPEDLL+ CHLC  R VHSYC
Sbjct: 420 QTIPYAPSTSDILILADQESPSFGAQSSRLPVCCECRCREPEDLLVSCHLCRIRCVHSYC 479

Query: 183 LDPPLIPWTCNNCRDLRILYQRFH 254
           LDPPL+PWTC +C+DLR+LY  FH
Sbjct: 480 LDPPLLPWTCIHCKDLRMLYHHFH 503


>emb|CBI16878.3| unnamed protein product [Vitis vinifera]
          Length = 475

 Score =  125 bits (315), Expect = 3e-27
 Identities = 54/84 (64%), Positives = 63/84 (75%)
 Frame = +3

Query: 3   QTIPYDSSATDIYVLPDWELTNFRAQPTAAPVCCECLSREPEDLLICCHLCSNRLVHSYC 182
           QTIPY  S +DI +L D E  +F AQ +  PVCCEC  REPEDLL+ CHLC  R VHSYC
Sbjct: 392 QTIPYAPSTSDILILADQESPSFGAQSSRLPVCCECRCREPEDLLVSCHLCRIRCVHSYC 451

Query: 183 LDPPLIPWTCNNCRDLRILYQRFH 254
           LDPPL+PWTC +C+DLR+LY  FH
Sbjct: 452 LDPPLLPWTCIHCKDLRMLYHHFH 475


>ref|XP_002305970.1| predicted protein [Populus trichocarpa] gi|222848934|gb|EEE86481.1|
           predicted protein [Populus trichocarpa]
          Length = 422

 Score =  110 bits (275), Expect = 1e-22
 Identities = 47/80 (58%), Positives = 57/80 (71%)
 Frame = +3

Query: 3   QTIPYDSSATDIYVLPDWELTNFRAQPTAAPVCCECLSREPEDLLICCHLCSNRLVHSYC 182
           QTIP+ SS  D++     E   F A+P+   VCCEC SREPEDLLI CHLC  R +HSYC
Sbjct: 339 QTIPHASSTVDVFFSMLQEQNKFGAEPSFGSVCCECRSREPEDLLIRCHLCETRCIHSYC 398

Query: 183 LDPPLIPWTCNNCRDLRILY 242
           LDPPL PW C +C+DL++LY
Sbjct: 399 LDPPLSPWICTHCKDLQMLY 418


>gb|ABK94444.1| unknown [Populus trichocarpa]
          Length = 482

 Score =  110 bits (275), Expect = 1e-22
 Identities = 47/80 (58%), Positives = 57/80 (71%)
 Frame = +3

Query: 3   QTIPYDSSATDIYVLPDWELTNFRAQPTAAPVCCECLSREPEDLLICCHLCSNRLVHSYC 182
           QTIP+ SS  D++     E   F A+P+   VCCEC SREPEDLLI CHLC  R +HSYC
Sbjct: 399 QTIPHASSTVDVFFSMLQEQNKFGAEPSFGSVCCECRSREPEDLLIRCHLCETRCIHSYC 458

Query: 183 LDPPLIPWTCNNCRDLRILY 242
           LDPPL PW C +C+DL++LY
Sbjct: 459 LDPPLSPWICTHCKDLQMLY 478


>ref|NP_001061801.1| Os08g0414200 [Oryza sativa Japonica Group]
           gi|37806204|dbj|BAC99707.1| unknown protein [Oryza
           sativa Japonica Group] gi|113623770|dbj|BAF23715.1|
           Os08g0414200 [Oryza sativa Japonica Group]
           gi|222640548|gb|EEE68680.1| hypothetical protein
           OsJ_27307 [Oryza sativa Japonica Group]
          Length = 531

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 43/83 (51%), Positives = 58/83 (69%)
 Frame = +3

Query: 3   QTIPYDSSATDIYVLPDWELTNFRAQPTAAPVCCECLSREPEDLLICCHLCSNRLVHSYC 182
           QTIP  S++TD ++  D  +      P+    C +C  REPE+LL+ CH+C ++ VHSYC
Sbjct: 450 QTIPC-STSTDTFIFDD-RVYGLPESPSGQGACYQCHCREPEELLLSCHVCRSQWVHSYC 507

Query: 183 LDPPLIPWTCNNCRDLRILYQRF 251
           LDPPL PWTC +CRDLR+LYQR+
Sbjct: 508 LDPPLTPWTCIHCRDLRMLYQRY 530


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