BLASTX nr result

ID: Coptis24_contig00034575 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034575
         (344 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266337.2| PREDICTED: uncharacterized tRNA/rRNA methylt...   172   3e-41
emb|CBI40848.3| unnamed protein product [Vitis vinifera]              172   3e-41
ref|XP_002307305.1| predicted protein [Populus trichocarpa] gi|2...   162   2e-38
ref|XP_004155215.1| PREDICTED: uncharacterized tRNA/rRNA methylt...   162   3e-38
ref|XP_004134271.1| PREDICTED: L-type lectin-domain containing r...   162   3e-38

>ref|XP_002266337.2| PREDICTED: uncharacterized tRNA/rRNA methyltransferase YsgA-like
           [Vitis vinifera]
          Length = 459

 Score =  172 bits (435), Expect = 3e-41
 Identities = 85/114 (74%), Positives = 96/114 (84%)
 Frame = -3

Query: 342 CCDPFNDKALRASRGASFQLPIVSGTWAQLENLRNEFQMKMLAGHPESNDGMKGCSLLSQ 163
           CCDPFN KALRASRGASFQLPIVSG+W  LE L+NEFQMKM+AGHP+SN   K  S LSQ
Sbjct: 336 CCDPFNGKALRASRGASFQLPIVSGSWIHLETLKNEFQMKMIAGHPDSNQKRKPVSPLSQ 395

Query: 162 QLADSLVEKHVCLVLGSEGQGLSEQSERACELISIPMSGDFESLNVSVAGGILL 1
            LADSL +  +CLVLGSEG GLSE+S + CEL+SIPM+G+FESLNVSVAGGI L
Sbjct: 396 GLADSLADVPLCLVLGSEGSGLSEKSWQLCELVSIPMAGEFESLNVSVAGGIFL 449


>emb|CBI40848.3| unnamed protein product [Vitis vinifera]
          Length = 1306

 Score =  172 bits (435), Expect = 3e-41
 Identities = 85/114 (74%), Positives = 96/114 (84%)
 Frame = -3

Query: 342  CCDPFNDKALRASRGASFQLPIVSGTWAQLENLRNEFQMKMLAGHPESNDGMKGCSLLSQ 163
            CCDPFN KALRASRGASFQLPIVSG+W  LE L+NEFQMKM+AGHP+SN   K  S LSQ
Sbjct: 1174 CCDPFNGKALRASRGASFQLPIVSGSWIHLETLKNEFQMKMIAGHPDSNQKRKPVSPLSQ 1233

Query: 162  QLADSLVEKHVCLVLGSEGQGLSEQSERACELISIPMSGDFESLNVSVAGGILL 1
             LADSL +  +CLVLGSEG GLSE+S + CEL+SIPM+G+FESLNVSVAGGI L
Sbjct: 1234 GLADSLADVPLCLVLGSEGSGLSEKSWQLCELVSIPMAGEFESLNVSVAGGIFL 1287


>ref|XP_002307305.1| predicted protein [Populus trichocarpa] gi|222856754|gb|EEE94301.1|
           predicted protein [Populus trichocarpa]
          Length = 359

 Score =  162 bits (411), Expect = 2e-38
 Identities = 78/114 (68%), Positives = 93/114 (81%)
 Frame = -3

Query: 342 CCDPFNDKALRASRGASFQLPIVSGTWAQLENLRNEFQMKMLAGHPESNDGMKGCSLLSQ 163
           CCDPFN K LRASRGASFQ+PIVSG+W  LE L++E+QMKMLAGHP+ ND  +  S LSQ
Sbjct: 235 CCDPFNSKVLRASRGASFQIPIVSGSWYHLEALKDEYQMKMLAGHPDCNDKSRPVSQLSQ 294

Query: 162 QLADSLVEKHVCLVLGSEGQGLSEQSERACELISIPMSGDFESLNVSVAGGILL 1
            LAD      +CLVLGSEG GLSE+++R CEL+SIPM+G+FESLNV+VAGGI L
Sbjct: 295 GLADCFARVPLCLVLGSEGHGLSEKAQRECELLSIPMAGEFESLNVAVAGGIFL 348


>ref|XP_004155215.1| PREDICTED: uncharacterized tRNA/rRNA methyltransferase slr1673-like
           [Cucumis sativus]
          Length = 328

 Score =  162 bits (409), Expect = 3e-38
 Identities = 82/114 (71%), Positives = 95/114 (83%)
 Frame = -3

Query: 342 CCDPFNDKALRASRGASFQLPIVSGTWAQLENLRNEFQMKMLAGHPESNDGMKGCSLLSQ 163
           CCDPFN+KALRASRGASFQLPIVSGTW  LE  + EF+MKMLAGHPESN+  K  S+LSQ
Sbjct: 208 CCDPFNEKALRASRGASFQLPIVSGTWNHLEVFKKEFEMKMLAGHPESNE-PKPVSVLSQ 266

Query: 162 QLADSLVEKHVCLVLGSEGQGLSEQSERACELISIPMSGDFESLNVSVAGGILL 1
           Q ++SL +  +CLVLG EG GLSE+S + CEL+SIPM+G FESLNVSVAGGI L
Sbjct: 267 QFSNSLKDFPLCLVLGCEGSGLSEKSWQVCELLSIPMAGGFESLNVSVAGGIFL 320


>ref|XP_004134271.1| PREDICTED: L-type lectin-domain containing receptor kinase
           IX.1-like [Cucumis sativus]
          Length = 762

 Score =  162 bits (409), Expect = 3e-38
 Identities = 82/114 (71%), Positives = 95/114 (83%)
 Frame = -3

Query: 342 CCDPFNDKALRASRGASFQLPIVSGTWAQLENLRNEFQMKMLAGHPESNDGMKGCSLLSQ 163
           CCDPFN+KALRASRGASFQLPIVSGTW  LE  + EF+MKMLAGHPESN+  K  S+LSQ
Sbjct: 642 CCDPFNEKALRASRGASFQLPIVSGTWNHLEVFKKEFEMKMLAGHPESNE-PKPVSVLSQ 700

Query: 162 QLADSLVEKHVCLVLGSEGQGLSEQSERACELISIPMSGDFESLNVSVAGGILL 1
           Q ++SL +  +CLVLG EG GLSE+S + CEL+SIPM+G FESLNVSVAGGI L
Sbjct: 701 QFSNSLKDFPLCLVLGCEGSGLSEKSWQVCELLSIPMAGGFESLNVSVAGGIFL 754


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