BLASTX nr result

ID: Coptis24_contig00034565 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034565
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27315.3| unnamed protein product [Vitis vinifera]              111   7e-23
ref|XP_002273558.1| PREDICTED: uncharacterized protein LOC100268...   111   7e-23
ref|XP_002512056.1| conserved hypothetical protein [Ricinus comm...    98   8e-19
gb|AAF98582.1|AC013427_25 This gene may be cut off [Arabidopsis ...    94   9e-18
gb|AAG50686.1|AC079829_19 hypothetical protein [Arabidopsis thal...    94   9e-18

>emb|CBI27315.3| unnamed protein product [Vitis vinifera]
          Length = 1177

 Score =  111 bits (277), Expect = 7e-23
 Identities = 53/87 (60%), Positives = 66/87 (75%)
 Frame = -2

Query: 263  IAFGKFSLQFTPDGQCLVSSNSIKVL*CRDRSIHCSCSLCTTVCFDENAIQIIHVKLGYV 84
            +A  +F LQFTPDGQ LV  NSIK   CR++ I C CS C   CF+ENAI+I+ +KLG++
Sbjct: 837  VALDRFGLQFTPDGQSLVLLNSIKTPYCREQKIPCLCSACKLECFEENAIKIVQIKLGFL 896

Query: 83   SLVAKLKTDDSVLSILVCEPSHLVALE 3
            S+V KLKT DSV  ILVCEP+HLVA+E
Sbjct: 897  SVVEKLKTVDSVQCILVCEPNHLVAVE 923


>ref|XP_002273558.1| PREDICTED: uncharacterized protein LOC100268093 [Vitis vinifera]
          Length = 1242

 Score =  111 bits (277), Expect = 7e-23
 Identities = 53/87 (60%), Positives = 66/87 (75%)
 Frame = -2

Query: 263  IAFGKFSLQFTPDGQCLVSSNSIKVL*CRDRSIHCSCSLCTTVCFDENAIQIIHVKLGYV 84
            +A  +F LQFTPDGQ LV  NSIK   CR++ I C CS C   CF+ENAI+I+ +KLG++
Sbjct: 902  VALDRFGLQFTPDGQSLVLLNSIKTPYCREQKIPCLCSACKLECFEENAIKIVQIKLGFL 961

Query: 83   SLVAKLKTDDSVLSILVCEPSHLVALE 3
            S+V KLKT DSV  ILVCEP+HLVA+E
Sbjct: 962  SVVEKLKTVDSVQCILVCEPNHLVAVE 988


>ref|XP_002512056.1| conserved hypothetical protein [Ricinus communis]
            gi|223549236|gb|EEF50725.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1246

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 45/85 (52%), Positives = 58/85 (68%)
 Frame = -2

Query: 263  IAFGKFSLQFTPDGQCLVSSNSIKVL*CRDRSIHCSCSLCTTVCFDENAIQIIHVKLGYV 84
            I+F +  LQ TPDGQCLV   S +   CR+  + C CS C + CF  N ++I+ VK GYV
Sbjct: 836  ISFERSGLQLTPDGQCLVLLGSTRAPCCREGRLECLCSACASDCFGSNGVKIVQVKAGYV 895

Query: 83   SLVAKLKTDDSVLSILVCEPSHLVA 9
            S++ KLKT+DS+  ILVCEP HLVA
Sbjct: 896  SVLVKLKTNDSLQCILVCEPDHLVA 920


>gb|AAF98582.1|AC013427_25 This gene may be cut off [Arabidopsis thaliana]
          Length = 554

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 41/79 (51%), Positives = 59/79 (74%)
 Frame = -2

Query: 245 SLQFTPDGQCLVSSNSIKVL*CRDRSIHCSCSLCTTVCFDENAIQIIHVKLGYVSLVAKL 66
           +L FTPDG  L+ + +IK   CR R   CSC +CT+ CF+ENA++I+ VK G+VSLV KL
Sbjct: 231 NLHFTPDGLHLILTGNIKTPYCRKRETDCSCLICTSACFEENAVRIVQVKTGHVSLVTKL 290

Query: 65  KTDDSVLSILVCEPSHLVA 9
           + DDSV  ++VC+P++L+A
Sbjct: 291 QADDSVQCVVVCDPNNLIA 309


>gb|AAG50686.1|AC079829_19 hypothetical protein [Arabidopsis thaliana]
          Length = 1196

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 41/79 (51%), Positives = 59/79 (74%)
 Frame = -2

Query: 245  SLQFTPDGQCLVSSNSIKVL*CRDRSIHCSCSLCTTVCFDENAIQIIHVKLGYVSLVAKL 66
            +L FTPDG  L+ + +IK   CR R   CSC +CT+ CF+ENA++I+ VK G+VSLV KL
Sbjct: 873  NLHFTPDGLHLILTGNIKTPYCRKRETDCSCLICTSACFEENAVRIVQVKTGHVSLVTKL 932

Query: 65   KTDDSVLSILVCEPSHLVA 9
            + DDSV  ++VC+P++L+A
Sbjct: 933  QADDSVQCVVVCDPNNLIA 951


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