BLASTX nr result
ID: Coptis24_contig00034565
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00034565 (321 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI27315.3| unnamed protein product [Vitis vinifera] 111 7e-23 ref|XP_002273558.1| PREDICTED: uncharacterized protein LOC100268... 111 7e-23 ref|XP_002512056.1| conserved hypothetical protein [Ricinus comm... 98 8e-19 gb|AAF98582.1|AC013427_25 This gene may be cut off [Arabidopsis ... 94 9e-18 gb|AAG50686.1|AC079829_19 hypothetical protein [Arabidopsis thal... 94 9e-18 >emb|CBI27315.3| unnamed protein product [Vitis vinifera] Length = 1177 Score = 111 bits (277), Expect = 7e-23 Identities = 53/87 (60%), Positives = 66/87 (75%) Frame = -2 Query: 263 IAFGKFSLQFTPDGQCLVSSNSIKVL*CRDRSIHCSCSLCTTVCFDENAIQIIHVKLGYV 84 +A +F LQFTPDGQ LV NSIK CR++ I C CS C CF+ENAI+I+ +KLG++ Sbjct: 837 VALDRFGLQFTPDGQSLVLLNSIKTPYCREQKIPCLCSACKLECFEENAIKIVQIKLGFL 896 Query: 83 SLVAKLKTDDSVLSILVCEPSHLVALE 3 S+V KLKT DSV ILVCEP+HLVA+E Sbjct: 897 SVVEKLKTVDSVQCILVCEPNHLVAVE 923 >ref|XP_002273558.1| PREDICTED: uncharacterized protein LOC100268093 [Vitis vinifera] Length = 1242 Score = 111 bits (277), Expect = 7e-23 Identities = 53/87 (60%), Positives = 66/87 (75%) Frame = -2 Query: 263 IAFGKFSLQFTPDGQCLVSSNSIKVL*CRDRSIHCSCSLCTTVCFDENAIQIIHVKLGYV 84 +A +F LQFTPDGQ LV NSIK CR++ I C CS C CF+ENAI+I+ +KLG++ Sbjct: 902 VALDRFGLQFTPDGQSLVLLNSIKTPYCREQKIPCLCSACKLECFEENAIKIVQIKLGFL 961 Query: 83 SLVAKLKTDDSVLSILVCEPSHLVALE 3 S+V KLKT DSV ILVCEP+HLVA+E Sbjct: 962 SVVEKLKTVDSVQCILVCEPNHLVAVE 988 >ref|XP_002512056.1| conserved hypothetical protein [Ricinus communis] gi|223549236|gb|EEF50725.1| conserved hypothetical protein [Ricinus communis] Length = 1246 Score = 97.8 bits (242), Expect = 8e-19 Identities = 45/85 (52%), Positives = 58/85 (68%) Frame = -2 Query: 263 IAFGKFSLQFTPDGQCLVSSNSIKVL*CRDRSIHCSCSLCTTVCFDENAIQIIHVKLGYV 84 I+F + LQ TPDGQCLV S + CR+ + C CS C + CF N ++I+ VK GYV Sbjct: 836 ISFERSGLQLTPDGQCLVLLGSTRAPCCREGRLECLCSACASDCFGSNGVKIVQVKAGYV 895 Query: 83 SLVAKLKTDDSVLSILVCEPSHLVA 9 S++ KLKT+DS+ ILVCEP HLVA Sbjct: 896 SVLVKLKTNDSLQCILVCEPDHLVA 920 >gb|AAF98582.1|AC013427_25 This gene may be cut off [Arabidopsis thaliana] Length = 554 Score = 94.4 bits (233), Expect = 9e-18 Identities = 41/79 (51%), Positives = 59/79 (74%) Frame = -2 Query: 245 SLQFTPDGQCLVSSNSIKVL*CRDRSIHCSCSLCTTVCFDENAIQIIHVKLGYVSLVAKL 66 +L FTPDG L+ + +IK CR R CSC +CT+ CF+ENA++I+ VK G+VSLV KL Sbjct: 231 NLHFTPDGLHLILTGNIKTPYCRKRETDCSCLICTSACFEENAVRIVQVKTGHVSLVTKL 290 Query: 65 KTDDSVLSILVCEPSHLVA 9 + DDSV ++VC+P++L+A Sbjct: 291 QADDSVQCVVVCDPNNLIA 309 >gb|AAG50686.1|AC079829_19 hypothetical protein [Arabidopsis thaliana] Length = 1196 Score = 94.4 bits (233), Expect = 9e-18 Identities = 41/79 (51%), Positives = 59/79 (74%) Frame = -2 Query: 245 SLQFTPDGQCLVSSNSIKVL*CRDRSIHCSCSLCTTVCFDENAIQIIHVKLGYVSLVAKL 66 +L FTPDG L+ + +IK CR R CSC +CT+ CF+ENA++I+ VK G+VSLV KL Sbjct: 873 NLHFTPDGLHLILTGNIKTPYCRKRETDCSCLICTSACFEENAVRIVQVKTGHVSLVTKL 932 Query: 65 KTDDSVLSILVCEPSHLVA 9 + DDSV ++VC+P++L+A Sbjct: 933 QADDSVQCVVVCDPNNLIA 951