BLASTX nr result

ID: Coptis24_contig00034560 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034560
         (342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001143807.1| uncharacterized protein LOC100276581 [Zea ma...    58   9e-07
gb|ACF86581.1| unknown [Zea mays] gi|413945382|gb|AFW78031.1| hy...    58   9e-07
gb|ACF79722.1| unknown [Zea mays] gi|413945383|gb|AFW78032.1| hy...    58   9e-07
ref|XP_002524573.1| conserved hypothetical protein [Ricinus comm...    57   2e-06
ref|XP_002531112.1| conserved hypothetical protein [Ricinus comm...    57   2e-06

>ref|NP_001143807.1| uncharacterized protein LOC100276581 [Zea mays]
           gi|195627486|gb|ACG35573.1| hypothetical protein [Zea
           mays]
          Length = 156

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 23/42 (54%), Positives = 30/42 (71%)
 Frame = +3

Query: 216 PRRVPLKAHNSNWKEKLRDNCFKRIREDRNKLLWKMRAPSQP 341
           P RV +KAH  +WK +LR NC +R+R+DRN LLWK+R    P
Sbjct: 6   PMRVSIKAHRPDWKSELRTNCLRRVRKDRNDLLWKIRKQGLP 47


>gb|ACF86581.1| unknown [Zea mays] gi|413945382|gb|AFW78031.1| hypothetical protein
           ZEAMMB73_156976 [Zea mays]
          Length = 156

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 23/42 (54%), Positives = 30/42 (71%)
 Frame = +3

Query: 216 PRRVPLKAHNSNWKEKLRDNCFKRIREDRNKLLWKMRAPSQP 341
           P RV +KAH  +WK +LR NC +R+R+DRN LLWK+R    P
Sbjct: 6   PMRVSIKAHRPDWKSELRTNCLRRVRKDRNDLLWKIRKQGLP 47


>gb|ACF79722.1| unknown [Zea mays] gi|413945383|gb|AFW78032.1| hypothetical protein
           ZEAMMB73_156976 [Zea mays]
          Length = 240

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 23/42 (54%), Positives = 30/42 (71%)
 Frame = +3

Query: 216 PRRVPLKAHNSNWKEKLRDNCFKRIREDRNKLLWKMRAPSQP 341
           P RV +KAH  +WK +LR NC +R+R+DRN LLWK+R    P
Sbjct: 6   PMRVSIKAHRPDWKSELRTNCLRRVRKDRNDLLWKIRKQGLP 47


>ref|XP_002524573.1| conserved hypothetical protein [Ricinus communis]
           gi|223536126|gb|EEF37781.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 262

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 25/48 (52%), Positives = 34/48 (70%), Gaps = 5/48 (10%)
 Frame = +3

Query: 207 TMEPRRVPLKAHNSN-----WKEKLRDNCFKRIREDRNKLLWKMRAPS 335
           T  P+R  +K  +       WK+KLR+NC+KR+REDRN+LLWKMR P+
Sbjct: 11  TPPPKRQSIKTQSHFNTYPLWKDKLRENCYKRVREDRNRLLWKMRLPT 58


>ref|XP_002531112.1| conserved hypothetical protein [Ricinus communis]
           gi|223529308|gb|EEF31277.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 308

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 25/48 (52%), Positives = 34/48 (70%), Gaps = 5/48 (10%)
 Frame = +3

Query: 207 TMEPRRVPLKAHNSN-----WKEKLRDNCFKRIREDRNKLLWKMRAPS 335
           T  P+R  +K  +       WK+KLR+NC+KR+REDRN+LLWKMR P+
Sbjct: 11  TPPPKRQSIKTQSHFNTYPLWKDKLRENCYKRVREDRNRLLWKMRLPT 58