BLASTX nr result

ID: Coptis24_contig00034536 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034536
         (282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305811.1| predicted protein [Populus trichocarpa] gi|2...   134   1e-29
ref|XP_002305810.1| predicted protein [Populus trichocarpa] gi|2...   134   1e-29
ref|XP_002519035.1| conserved hypothetical protein [Ricinus comm...   131   6e-29
ref|XP_003543060.1| PREDICTED: uncharacterized protein LOC100812...   130   1e-28
ref|XP_002267898.2| PREDICTED: uncharacterized protein LOC100265...   129   3e-28

>ref|XP_002305811.1| predicted protein [Populus trichocarpa] gi|222848775|gb|EEE86322.1|
           predicted protein [Populus trichocarpa]
          Length = 607

 Score =  134 bits (336), Expect = 1e-29
 Identities = 65/93 (69%), Positives = 75/93 (80%), Gaps = 1/93 (1%)
 Frame = -1

Query: 282 QGAHSGSTSLNESSQVSACLQGAIAKITSTTDGVSSLASNPMS-PSTFTPISINTGTFPG 106
           QG  SG TS   S+Q+ A +QGAIAKI+STTDGVS+   NP+S PS+F PISINTGTFPG
Sbjct: 149 QGGQSGGTSSTGSTQMQAWVQGAIAKISSTTDGVSTATPNPISGPSSFMPISINTGTFPG 208

Query: 105 IPAVRLVGDCHFLHRLCQLLYFCYIFWRRQMPR 7
            PAVRL+GDCHFLHRLCQLL FC+ F R Q+PR
Sbjct: 209 TPAVRLIGDCHFLHRLCQLLLFCFFFRRTQLPR 241


>ref|XP_002305810.1| predicted protein [Populus trichocarpa] gi|222848774|gb|EEE86321.1|
            predicted protein [Populus trichocarpa]
          Length = 1328

 Score =  134 bits (336), Expect = 1e-29
 Identities = 65/93 (69%), Positives = 75/93 (80%), Gaps = 1/93 (1%)
 Frame = -1

Query: 282  QGAHSGSTSLNESSQVSACLQGAIAKITSTTDGVSSLASNPMS-PSTFTPISINTGTFPG 106
            QG  SG TS   S+Q+ A +QGAIAKI+STTDGVS+   NP+S PS+F PISINTGTFPG
Sbjct: 922  QGGQSGGTSSTGSTQMQAWVQGAIAKISSTTDGVSTATPNPISGPSSFMPISINTGTFPG 981

Query: 105  IPAVRLVGDCHFLHRLCQLLYFCYIFWRRQMPR 7
             PAVRL+GDCHFLHRLCQLL FC+ F R Q+PR
Sbjct: 982  TPAVRLIGDCHFLHRLCQLLLFCFFFRRTQLPR 1014


>ref|XP_002519035.1| conserved hypothetical protein [Ricinus communis]
            gi|223541698|gb|EEF43246.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1255

 Score =  131 bits (329), Expect = 6e-29
 Identities = 63/93 (67%), Positives = 75/93 (80%), Gaps = 1/93 (1%)
 Frame = -1

Query: 282  QGAHSGSTSLNESSQVSACLQGAIAKITSTTDGVSSLASNPMS-PSTFTPISINTGTFPG 106
            QG  +G+TS   S+Q+ A +QGAIAKI+ST DGVS+   NP+S PS+F PISINTGTFPG
Sbjct: 848  QGGQNGTTSSTGSTQMQAWVQGAIAKISSTNDGVSNATPNPISGPSSFMPISINTGTFPG 907

Query: 105  IPAVRLVGDCHFLHRLCQLLYFCYIFWRRQMPR 7
             PAVRL+GDCHFLHRLCQLL FC+ F R Q+PR
Sbjct: 908  TPAVRLIGDCHFLHRLCQLLLFCFFFRRTQLPR 940


>ref|XP_003543060.1| PREDICTED: uncharacterized protein LOC100812938 [Glycine max]
          Length = 1189

 Score =  130 bits (326), Expect = 1e-28
 Identities = 63/95 (66%), Positives = 75/95 (78%), Gaps = 2/95 (2%)
 Frame = -1

Query: 282  QGAHSGSTSLNESSQVSACLQGAIAKITSTTDGVSSLASNP--MSPSTFTPISINTGTFP 109
            QG  +G+TS + S+Q+ A +QGAIAKI+STTDGVS+   NP    PS+F PISINTGTFP
Sbjct: 784  QGGQNGTTSSSGSTQMQAWVQGAIAKISSTTDGVSNPVPNPPISGPSSFMPISINTGTFP 843

Query: 108  GIPAVRLVGDCHFLHRLCQLLYFCYIFWRRQMPRH 4
            G PAVRL+GDCHFLHRLCQLL FC+ F R Q PR+
Sbjct: 844  GTPAVRLIGDCHFLHRLCQLLLFCFFFRRAQQPRY 878


>ref|XP_002267898.2| PREDICTED: uncharacterized protein LOC100265327, partial [Vitis
           vinifera]
          Length = 785

 Score =  129 bits (323), Expect = 3e-28
 Identities = 62/93 (66%), Positives = 74/93 (79%), Gaps = 1/93 (1%)
 Frame = -1

Query: 282 QGAHSGSTSLNESSQVSACLQGAIAKITSTTDGVSSLASNPMS-PSTFTPISINTGTFPG 106
           QG  SG+TS   S+Q+ A +QGAIAKI+STTDGV +   NP++ P +F PISINTGTFPG
Sbjct: 379 QGGQSGTTSSTGSTQMQAWVQGAIAKISSTTDGVPNSTPNPINGPPSFIPISINTGTFPG 438

Query: 105 IPAVRLVGDCHFLHRLCQLLYFCYIFWRRQMPR 7
            PAVRL+GDCHFLHRLCQLL FC+ F R Q+PR
Sbjct: 439 TPAVRLIGDCHFLHRLCQLLLFCFFFRRTQLPR 471


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