BLASTX nr result

ID: Coptis24_contig00034529 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034529
         (397 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317781.1| predicted protein [Populus trichocarpa] gi|2...   105   5e-21
emb|CBI23014.3| unnamed protein product [Vitis vinifera]               93   2e-17
ref|XP_002272529.1| PREDICTED: protein IQ-DOMAIN 1-like [Vitis v...    93   2e-17
ref|XP_002321997.1| predicted protein [Populus trichocarpa] gi|2...    92   4e-17
ref|XP_003523363.1| PREDICTED: protein IQ-DOMAIN 14-like [Glycin...    86   4e-15

>ref|XP_002317781.1| predicted protein [Populus trichocarpa] gi|222858454|gb|EEE96001.1|
           predicted protein [Populus trichocarpa]
          Length = 465

 Score =  105 bits (261), Expect = 5e-21
 Identities = 62/133 (46%), Positives = 73/133 (54%), Gaps = 2/133 (1%)
 Frame = +2

Query: 2   DMITPSGADTVNMTRFGRNTVDSVPITTRQQRQMGSENLPSYMAPTQSAKAKVRSQGEAK 181
           DM+TP+G    NM       +D+ P + R Q Q  S N+ SYMAPTQSAKAKVRSQ   K
Sbjct: 326 DMVTPTGTSNPNM-----GMLDTNPYSNRPQWQSSSSNVRSYMAPTQSAKAKVRSQSLIK 380

Query: 182 QRPIAAYQWNPSPKK-XXXXXXXXXXXXXXXXTAIFQVGRSPSPKSNGISMHARR-LTGY 355
           QR  A   WNPS KK                 T  +   RSPSPK NG+ +H+RR   GY
Sbjct: 381 QRAPATPLWNPSTKKDSSIVGPGCDSSSSGGGTTTYHAPRSPSPKHNGMRLHSRRHAGGY 440

Query: 356 SPDSSGGDGWISP 394
           SPD +GGD W  P
Sbjct: 441 SPDFNGGDDWRLP 453


>emb|CBI23014.3| unnamed protein product [Vitis vinifera]
          Length = 478

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 55/136 (40%), Positives = 75/136 (55%), Gaps = 7/136 (5%)
 Frame = +2

Query: 2   DMITPSGADTVNMTRFGRNTVDSVPIT----TRQQRQMGSENLPSYMAPTQSAKAKVRSQ 169
           D+I+P G D +   + G++ V     T    TRQ +Q  S+N+PSYMAPT+S +AK R+Q
Sbjct: 332 DVISPPGLDNIYTGQHGQHVVGDSFRTPTDPTRQLKQPSSDNVPSYMAPTKSTRAKFRAQ 391

Query: 170 GEAKQRPIAAY-QWNPSPKKXXXXXXXXXXXXXXXXTA--IFQVGRSPSPKSNGISMHAR 340
           G  K RP     QWNPS KK                TA   +   RSPSPK+NG    AR
Sbjct: 392 GPTKPRPAPQMPQWNPSTKKAPFLGSGCDSSSSGGGTATTTYPTPRSPSPKANGPRAPAR 451

Query: 341 RLTGYSPDSSGGDGWI 388
           R+  ++PDS+G + W+
Sbjct: 452 RVGRFNPDSNGAEEWM 467


>ref|XP_002272529.1| PREDICTED: protein IQ-DOMAIN 1-like [Vitis vinifera]
          Length = 466

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 55/136 (40%), Positives = 75/136 (55%), Gaps = 7/136 (5%)
 Frame = +2

Query: 2   DMITPSGADTVNMTRFGRNTVDSVPIT----TRQQRQMGSENLPSYMAPTQSAKAKVRSQ 169
           D+I+P G D +   + G++ V     T    TRQ +Q  S+N+PSYMAPT+S +AK R+Q
Sbjct: 320 DVISPPGLDNIYTGQHGQHVVGDSFRTPTDPTRQLKQPSSDNVPSYMAPTKSTRAKFRAQ 379

Query: 170 GEAKQRPIAAY-QWNPSPKKXXXXXXXXXXXXXXXXTA--IFQVGRSPSPKSNGISMHAR 340
           G  K RP     QWNPS KK                TA   +   RSPSPK+NG    AR
Sbjct: 380 GPTKPRPAPQMPQWNPSTKKAPFLGSGCDSSSSGGGTATTTYPTPRSPSPKANGPRAPAR 439

Query: 341 RLTGYSPDSSGGDGWI 388
           R+  ++PDS+G + W+
Sbjct: 440 RVGRFNPDSNGAEEWM 455


>ref|XP_002321997.1| predicted protein [Populus trichocarpa] gi|222868993|gb|EEF06124.1|
           predicted protein [Populus trichocarpa]
          Length = 460

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 59/135 (43%), Positives = 73/135 (54%), Gaps = 4/135 (2%)
 Frame = +2

Query: 2   DMITPSGADTVNMTRFGRNTVDSVPITTRQQRQMGSENLPSYMAPTQSAKAKVRSQGEAK 181
           DM+TP+G    NM       +D+   + R QRQ+ S N+PSYMAPTQSAKAKVRSQG  K
Sbjct: 319 DMVTPTGTSNSNM-----GILDANLSSNRHQRQLSSSNVPSYMAPTQSAKAKVRSQGSTK 373

Query: 182 QRPIAAYQW-NPSPKK-XXXXXXXXXXXXXXXXTAIFQVGRSPSPKSNGISMHARR-LTG 352
           Q+        NP  KK                    +Q  RSPSPK NG+ +H++R   G
Sbjct: 374 QQYAPGTPLRNPFTKKGSSINGGSGCDSSSSGGGTTYQALRSPSPKQNGMRLHSKRHAGG 433

Query: 353 YSPD-SSGGDGWISP 394
           YSPD + GGD W  P
Sbjct: 434 YSPDFNGGGDDWRVP 448


>ref|XP_003523363.1| PREDICTED: protein IQ-DOMAIN 14-like [Glycine max]
          Length = 462

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 50/131 (38%), Positives = 66/131 (50%)
 Frame = +2

Query: 2   DMITPSGADTVNMTRFGRNTVDSVPITTRQQRQMGSENLPSYMAPTQSAKAKVRSQGEAK 181
           DM     +   NM      + D+ PI+ R  ++  S  +PSYMAPTQSAKAKVRSQG  K
Sbjct: 324 DMGATLDSTHANMGFINGESFDTSPISNRYHQRHHSAGVPSYMAPTQSAKAKVRSQGPFK 383

Query: 182 QRPIAAYQWNPSPKKXXXXXXXXXXXXXXXXTAIFQVGRSPSPKSNGISMHARRLTGYSP 361
           QR      WN S ++                TA     RSP+PK N I + +RR++G SP
Sbjct: 384 QRGSPGPHWNSSTRRGSSVGLGCDSSSSGGPTAAHVFPRSPNPKINEIRLQSRRISGGSP 443

Query: 362 DSSGGDGWISP 394
           D+   + W  P
Sbjct: 444 DNVHIEDWALP 454


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