BLASTX nr result

ID: Coptis24_contig00034528 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034528
         (299 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77052.1| hypothetical protein VITISV_002154 [Vitis vinifera]    62   5e-08
emb|CAN77951.1| hypothetical protein VITISV_038393 [Vitis vinifera]    62   5e-08
emb|CAN70843.1| hypothetical protein VITISV_007636 [Vitis vinifera]    62   6e-08
emb|CAN67183.1| hypothetical protein VITISV_007528 [Vitis vinifera]    60   1e-07
emb|CAN61320.1| hypothetical protein VITISV_012104 [Vitis vinifera]    60   2e-07

>emb|CAN77052.1| hypothetical protein VITISV_002154 [Vitis vinifera]
          Length = 1962

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 41/116 (35%), Positives = 58/116 (50%), Gaps = 24/116 (20%)
 Frame = -2

Query: 280 LYSGGDLTRPVLDGMNFERLSVDQKVRVQSSSDEDEILATLEDLGEEKAPGSDGFQD--- 110
           LY   +  RP +DG++F RL + +   ++    E+E+LA L DLG++KAPG DGF     
Sbjct: 418 LYQEEEGWRPSVDGISFMRLDISEAEGLEIPFXEEEVLAALTDLGKDKAPGPDGFTMAFW 477

Query: 109 -YG--------------------FVN*CVQTTFIPLIPKKEGVLSIGDCRPNSLIG 5
            YG                    FV   +  TF+ L+PKK G   + D RP SL+G
Sbjct: 478 LYGWDVVKFEIMGFFREFHERGRFVK-SLNATFLVLVPKKGGAEDLKDFRPISLVG 532


>emb|CAN77951.1| hypothetical protein VITISV_038393 [Vitis vinifera]
          Length = 380

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 34/107 (31%), Positives = 54/107 (50%), Gaps = 23/107 (21%)
 Frame = -2

Query: 253 PVLDGMNFERLSVDQKVRVQSSSDEDEILATLEDLGEEKAPGSDG--------------- 119
           P ++G++F R+ V +  R++    E+E+L+ L DL  +KAPG +G               
Sbjct: 47  PTMEGLDFNRIDVHEAARLEEVFTEEEVLSALSDLNGDKAPGPNGFPLSFWQSCWEFVKE 106

Query: 118 --------FQDYGFVN*CVQTTFIPLIPKKEGVLSIGDCRPNSLIGG 2
                   F ++G     + +TF+ LIPKK G   + D RP SL+GG
Sbjct: 107 EVMGFLKEFHEHGRFVKSLNSTFLVLIPKKAGAKDLRDFRPISLVGG 153


>emb|CAN70843.1| hypothetical protein VITISV_007636 [Vitis vinifera]
          Length = 395

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 35/84 (41%), Positives = 47/84 (55%)
 Frame = -2

Query: 256 RPVLDGMNFERLSVDQKVRVQSSSDEDEILATLEDLGEEKAPGSDGFQDYGFVN*CVQTT 77
           RP LDG+ FE L   +  R++    E+E+  TL DLG++KAPG DGF         +  T
Sbjct: 247 RPSLDGLAFEGLDSWEAERLEVPFLEEEVFTTLSDLGKDKAPGPDGFVK------SLNAT 300

Query: 76  FIPLIPKKEGVLSIGDCRPNSLIG 5
           F+ L+PKK     + D RP SL G
Sbjct: 301 FLVLVPKKGEAEDLIDFRPTSLAG 324


>emb|CAN67183.1| hypothetical protein VITISV_007528 [Vitis vinifera]
          Length = 1587

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 41/116 (35%), Positives = 57/116 (49%), Gaps = 24/116 (20%)
 Frame = -2

Query: 280  LYSGGDLTRPVLDGMNFERLSVDQKVRVQSSSDEDEILATLEDLGEEKAPGSDGFQD--- 110
            LY   +  RP +DG++F RL + +   ++    E+E+LA L DLG++KAPG DGF     
Sbjct: 891  LYQEEEGWRPSVDGISFMRLDISEAEGLEIPFVEEEVLAALTDLGKDKAPGXDGFTMAFW 950

Query: 109  -YG--------------------FVN*CVQTTFIPLIPKKEGVLSIGDCRPNSLIG 5
             YG                    FV      TF+ L+PKK G   + D RP SL+G
Sbjct: 951  LYGWDVVKFEIMGFFREFHERGRFVK-SXNATFLVLVPKKGGAEDLKDFRPISLVG 1005


>emb|CAN61320.1| hypothetical protein VITISV_012104 [Vitis vinifera]
          Length = 677

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 37/85 (43%), Positives = 48/85 (56%)
 Frame = -2

Query: 256 RPVLDGMNFERLSVDQKVRVQSSSDEDEILATLEDLGEEKAPGSDGFQDYGFVN*CVQTT 77
           RP L G++FERL   +   ++    E+EI   L D   +KAPGSD   D  FV   V  T
Sbjct: 46  RPNLSGLSFERLDSMEVEGLEKPFIEEEIFGALSDFSGDKAPGSD---DGCFVR-SVNAT 101

Query: 76  FIPLIPKKEGVLSIGDCRPNSLIGG 2
           F+ LIPK+E V  + D RP SL+ G
Sbjct: 102 FLVLIPKREDVKDLRDLRPISLVRG 126


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