BLASTX nr result

ID: Coptis24_contig00034525 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034525
         (541 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532763.1| dynamin, putative [Ricinus communis] gi|2235...   236   2e-60
ref|XP_002269774.2| PREDICTED: dynamin-related protein 3A-like [...   233   1e-59
emb|CBI38239.3| unnamed protein product [Vitis vinifera]              233   1e-59
ref|XP_002309855.1| predicted protein [Populus trichocarpa] gi|2...   228   5e-58
ref|XP_002327916.1| predicted protein [Populus trichocarpa] gi|2...   227   8e-58

>ref|XP_002532763.1| dynamin, putative [Ricinus communis] gi|223527492|gb|EEF29620.1|
            dynamin, putative [Ricinus communis]
          Length = 837

 Score =  236 bits (602), Expect = 2e-60
 Identities = 118/177 (66%), Positives = 145/177 (81%), Gaps = 3/177 (1%)
 Frame = -1

Query: 541  PVHSM---ELALSTIQLKEPPAFLRPSETLSEQETVEITITKLLLRSYYDIVRKNIEDSV 371
            PVH+M   E ++S I L+EPP  LRPSE+ SEQE++EI +TKLLLRSYYDIVRKNIEDS+
Sbjct: 628  PVHNMDALEQSMSMIYLREPPTILRPSESHSEQESIEIAVTKLLLRSYYDIVRKNIEDSI 687

Query: 370  PKAIMHFLVNHTKRELHNEFIEKLYSDNLFEEMLQEPDEVVLKRKRTDDYLCVLHQAFRT 191
            PKAIMHFLVNHTKRELHN FI+KLY +NLFEEMLQEP+E+ +KRKRT + L +L QA++T
Sbjct: 688  PKAIMHFLVNHTKRELHNVFIKKLYRENLFEEMLQEPEEIAMKRKRTRETLRILQQAYKT 747

Query: 190  LDELPLDAETIERGYSVGTDPTGLPKIYGLPSSTLH*TYGNLSGLL*HLPETQGPES 20
            LDELPL+AET+ERGYS+G DPTGLPKI+GLP+S+L   Y   SG   +    + P+S
Sbjct: 748  LDELPLEAETVERGYSLGADPTGLPKIHGLPTSSL---YSTSSGSSDYSASPKNPKS 801


>ref|XP_002269774.2| PREDICTED: dynamin-related protein 3A-like [Vitis vinifera]
          Length = 831

 Score =  233 bits (595), Expect = 1e-59
 Identities = 116/158 (73%), Positives = 137/158 (86%), Gaps = 1/158 (0%)
 Frame = -1

Query: 541  PVHSMELALSTIQLKEPPAFLRPSETLSEQETVEITITKLLLRSYYDIVRKNIEDSVPKA 362
            PV S+E ++S I LKEPP  L+PSE+ SEQE +EI++TKLLLRSYYDIVRKNIED+VPKA
Sbjct: 623  PVQSVEHSISMIHLKEPPTILKPSESHSEQEAIEISVTKLLLRSYYDIVRKNIEDAVPKA 682

Query: 361  IMHFLVNHTKRELHNEFIEKLYSDNLFEEMLQEPDEVVLKRKRTDDYLCVLHQAFRTLDE 182
            IMHFLVNHTKRELHN FI KLY +NLFEEMLQEPDEV +KRKRT + L VL QA RTLDE
Sbjct: 683  IMHFLVNHTKRELHNVFIRKLYRENLFEEMLQEPDEVAMKRKRTSETLRVLQQALRTLDE 742

Query: 181  LPLDAETIERGYSVG-TDPTGLPKIYGLPSSTLH*TYG 71
            LP +AET+E+GYS+G +DPTGLPKI+GLP+S+L+ T G
Sbjct: 743  LPQEAETVEKGYSLGSSDPTGLPKIHGLPTSSLYTTSG 780


>emb|CBI38239.3| unnamed protein product [Vitis vinifera]
          Length = 923

 Score =  233 bits (595), Expect = 1e-59
 Identities = 116/158 (73%), Positives = 137/158 (86%), Gaps = 1/158 (0%)
 Frame = -1

Query: 541  PVHSMELALSTIQLKEPPAFLRPSETLSEQETVEITITKLLLRSYYDIVRKNIEDSVPKA 362
            PV S+E ++S I LKEPP  L+PSE+ SEQE +EI++TKLLLRSYYDIVRKNIED+VPKA
Sbjct: 715  PVQSVEHSISMIHLKEPPTILKPSESHSEQEAIEISVTKLLLRSYYDIVRKNIEDAVPKA 774

Query: 361  IMHFLVNHTKRELHNEFIEKLYSDNLFEEMLQEPDEVVLKRKRTDDYLCVLHQAFRTLDE 182
            IMHFLVNHTKRELHN FI KLY +NLFEEMLQEPDEV +KRKRT + L VL QA RTLDE
Sbjct: 775  IMHFLVNHTKRELHNVFIRKLYRENLFEEMLQEPDEVAMKRKRTSETLRVLQQALRTLDE 834

Query: 181  LPLDAETIERGYSVG-TDPTGLPKIYGLPSSTLH*TYG 71
            LP +AET+E+GYS+G +DPTGLPKI+GLP+S+L+ T G
Sbjct: 835  LPQEAETVEKGYSLGSSDPTGLPKIHGLPTSSLYTTSG 872


>ref|XP_002309855.1| predicted protein [Populus trichocarpa] gi|222852758|gb|EEE90305.1|
            predicted protein [Populus trichocarpa]
          Length = 835

 Score =  228 bits (581), Expect = 5e-58
 Identities = 109/152 (71%), Positives = 131/152 (86%)
 Frame = -1

Query: 538  VHSMELALSTIQLKEPPAFLRPSETLSEQETVEITITKLLLRSYYDIVRKNIEDSVPKAI 359
            +  +E +LS I L+EPP  LRPSE  SE E++EI +TKLLLRSYYDIVRKNIEDS+PKAI
Sbjct: 633  IEPLEQSLSLIHLREPPTVLRPSENHSEHESIEIAVTKLLLRSYYDIVRKNIEDSIPKAI 692

Query: 358  MHFLVNHTKRELHNEFIEKLYSDNLFEEMLQEPDEVVLKRKRTDDYLCVLHQAFRTLDEL 179
            MHFLVNHTKRELHN FI KLY +NLFEEMLQEPDE+ +KRK+T + L VL QAFRTLDEL
Sbjct: 693  MHFLVNHTKRELHNVFIRKLYRENLFEEMLQEPDEIAMKRKQTREQLRVLQQAFRTLDEL 752

Query: 178  PLDAETIERGYSVGTDPTGLPKIYGLPSSTLH 83
            PL+AE++ERGYS+ +D TGLPKI+GLP+ST++
Sbjct: 753  PLEAESVERGYSLSSDSTGLPKIHGLPTSTMY 784


>ref|XP_002327916.1| predicted protein [Populus trichocarpa] gi|222837325|gb|EEE75704.1|
            predicted protein [Populus trichocarpa]
          Length = 821

 Score =  227 bits (579), Expect = 8e-58
 Identities = 113/154 (73%), Positives = 131/154 (85%), Gaps = 1/154 (0%)
 Frame = -1

Query: 541  PVHSME-LALSTIQLKEPPAFLRPSETLSEQETVEITITKLLLRSYYDIVRKNIEDSVPK 365
            P  SME    S I L+EPP  LRPSE+ SE E++EI +TKLLL+SYYDIVRKNIEDSVPK
Sbjct: 617  PAQSMESFDQSMIHLREPPTVLRPSESHSENESIEIAVTKLLLKSYYDIVRKNIEDSVPK 676

Query: 364  AIMHFLVNHTKRELHNEFIEKLYSDNLFEEMLQEPDEVVLKRKRTDDYLCVLHQAFRTLD 185
            AIMHFLVNHTKRELHN FI KLY +NLFEEMLQE DE+ +KRK+T + L VL QAFRTLD
Sbjct: 677  AIMHFLVNHTKRELHNVFIRKLYRENLFEEMLQEHDEIAMKRKQTRESLRVLQQAFRTLD 736

Query: 184  ELPLDAETIERGYSVGTDPTGLPKIYGLPSSTLH 83
            ELPL+AET+ERGYS+G+D TGLPKI+GLP+ST+H
Sbjct: 737  ELPLEAETVERGYSLGSDSTGLPKIHGLPTSTMH 770


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