BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034515
         (319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547378.1| PREDICTED: condensin-2 complex subunit D3-li...    76   3e-12
ref|XP_003533347.1| PREDICTED: condensin-2 complex subunit D3-li...    72   6e-11
ref|XP_002516933.1| condensin, putative [Ricinus communis] gi|22...    68   9e-10
emb|CBI26044.3| unnamed protein product [Vitis vinifera]               55   8e-06
ref|XP_002275652.1| PREDICTED: condensin-2 complex subunit D3-li...    55   8e-06

>ref|XP_003547378.1| PREDICTED: condensin-2 complex subunit D3-like [Glycine max]
          Length = 1324

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 48/108 (44%), Positives = 55/108 (50%), Gaps = 3/108 (2%)
 Frame = +3

Query: 3   RIITEVETLNKNPQP---ISEPTLEDLQSLFEDDTEEVIHNLFDQLLQKNXXXXXXXXXX 173
           RII+E+E L  NPQP   +SE TL DLQ L +    E    L+D+L  KN          
Sbjct: 7   RIISELEDLRGNPQPPPPLSEQTLMDLQFLLKHSLTET---LYDELPSKNLSPSSLIPPI 63

Query: 174 XXXMDSGPPHXXXXXXXXXXXXXXXPNSPVLMLFTPIVFLSLLRSLRR 317
              MDS PPH               PN+PV  LFTPI FLS LRSLRR
Sbjct: 64  ASAMDSSPPHHSLLASDVFLSLLLAPNAPVFTLFTPISFLSFLRSLRR 111


>ref|XP_003533347.1| PREDICTED: condensin-2 complex subunit D3-like [Glycine max]
          Length = 1334

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 44/107 (41%), Positives = 55/107 (51%), Gaps = 2/107 (1%)
 Frame = +3

Query: 3   RIITEVETLNKNPQP--ISEPTLEDLQSLFEDDTEEVIHNLFDQLLQKNXXXXXXXXXXX 176
           R+I+E+E L  NPQP  +SE TL +L  L +    E   +L+D+L  KN           
Sbjct: 18  RVISELEDLRGNPQPPPLSEQTLTNLLFLLKHSLSE---SLYDELSSKNLSPSSLIPPIA 74

Query: 177 XXMDSGPPHXXXXXXXXXXXXXXXPNSPVLMLFTPIVFLSLLRSLRR 317
             MDS PPH               PN+PV  LFTP+ FLS LRSLRR
Sbjct: 75  SAMDSSPPHHSLLASDVFLSLLLAPNAPVFTLFTPMSFLSFLRSLRR 121


>ref|XP_002516933.1| condensin, putative [Ricinus communis] gi|223544021|gb|EEF45547.1|
           condensin, putative [Ricinus communis]
          Length = 1313

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 41/100 (41%), Positives = 51/100 (51%), Gaps = 1/100 (1%)
 Frame = +3

Query: 21  ETLNKNP-QPISEPTLEDLQSLFEDDTEEVIHNLFDQLLQKNXXXXXXXXXXXXXMDSGP 197
           ET+  NP Q +S  TLE+LQSL + +  +V+   F  L  K+             MDSGP
Sbjct: 14  ETIQTNPTQNLSLSTLENLQSLLDTNDPQVLAQFFIDLSSKSISIASLLSPLTSTMDSGP 73

Query: 198 PHXXXXXXXXXXXXXXXPNSPVLMLFTPIVFLSLLRSLRR 317
            H               PNSPV  LFTP+ FLSLLRS+RR
Sbjct: 74  THLSLLSSKSYLSLLLSPNSPVFTLFTPMSFLSLLRSIRR 113


>emb|CBI26044.3| unnamed protein product [Vitis vinifera]
          Length = 1294

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 36/97 (37%), Positives = 47/97 (48%), Gaps = 4/97 (4%)
 Frame = +3

Query: 39  PQPISEPTLEDLQSLFEDD--TEEVIH--NLFDQLLQKNXXXXXXXXXXXXXMDSGPPHX 206
           P PIS+ TL DLQ+L ++   TE+  H   LF+ L  +N             MDS P   
Sbjct: 26  PLPISQSTLSDLQTLLDNAMATEDSHHIDRLFEDLSSRNLSISSLIRPMASAMDSSPTDI 85

Query: 207 XXXXXXXXXXXXXXPNSPVLMLFTPIVFLSLLRSLRR 317
                          N+PV  LFTP+ FLSLLRS+R+
Sbjct: 86  SLLASRVYLSLLLSLNAPVFTLFTPMAFLSLLRSIRQ 122


>ref|XP_002275652.1| PREDICTED: condensin-2 complex subunit D3-like [Vitis vinifera]
          Length = 1345

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 36/97 (37%), Positives = 47/97 (48%), Gaps = 4/97 (4%)
 Frame = +3

Query: 39  PQPISEPTLEDLQSLFEDD--TEEVIH--NLFDQLLQKNXXXXXXXXXXXXXMDSGPPHX 206
           P PIS+ TL DLQ+L ++   TE+  H   LF+ L  +N             MDS P   
Sbjct: 26  PLPISQSTLSDLQTLLDNAMATEDSHHIDRLFEDLSSRNLSISSLIRPMASAMDSSPTDI 85

Query: 207 XXXXXXXXXXXXXXPNSPVLMLFTPIVFLSLLRSLRR 317
                          N+PV  LFTP+ FLSLLRS+R+
Sbjct: 86  SLLASRVYLSLLLSLNAPVFTLFTPMAFLSLLRSIRQ 122