BLASTX nr result
ID: Coptis24_contig00034496
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00034496 (397 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBL94154.1| putative polyprotein (retrotrasposon protein) [M... 86 2e-15 emb|CAN75533.1| hypothetical protein VITISV_024796 [Vitis vinifera] 80 2e-13 emb|CAN82791.1| hypothetical protein VITISV_033795 [Vitis vinifera] 79 4e-13 emb|CAN68398.1| hypothetical protein VITISV_007896 [Vitis vinifera] 76 3e-12 ref|XP_002334881.1| predicted protein [Populus trichocarpa] gi|2... 75 4e-12 >emb|CBL94154.1| putative polyprotein (retrotrasposon protein) [Malus x domestica] Length = 1390 Score = 86.3 bits (212), Expect = 2e-15 Identities = 40/86 (46%), Positives = 55/86 (63%) Frame = -1 Query: 259 DNSAFPKTVPLDESNYTIWAPLMRMRIGARGKIGFFTGAKVEPDMNSTEYEGWATDNEKV 80 D SA P TV L+ SNY +W+ ++ M I RG+ GF TG+ EP +YE W T N V Sbjct: 27 DVSAVPNTVKLNGSNYPLWSKVLEMHIAGRGRKGFVTGSIKEPAEEIADYETWETGNAIV 86 Query: 79 KSWLIDSMEISLMNRYIRLPTARDIW 2 K WLI+SME ++M +I L TA+++W Sbjct: 87 KGWLINSMEPAIMGFFIHLRTAKEVW 112 >emb|CAN75533.1| hypothetical protein VITISV_024796 [Vitis vinifera] Length = 861 Score = 79.7 bits (195), Expect = 2e-13 Identities = 37/82 (45%), Positives = 49/82 (59%) Frame = -1 Query: 247 FPKTVPLDESNYTIWAPLMRMRIGARGKIGFFTGAKVEPDMNSTEYEGWATDNEKVKSWL 68 F + L ESNY IW+ LM M I R K+ + G P + YE W +N+KVK WL Sbjct: 17 FNPGIILTESNYDIWSQLMEMHIAEREKLSYIRGKTNLPKESEDGYEKWYAENQKVKRWL 76 Query: 67 IDSMEISLMNRYIRLPTARDIW 2 + SM +M RY+RLPTA++IW Sbjct: 77 LMSMSPEIMKRYLRLPTAQEIW 98 >emb|CAN82791.1| hypothetical protein VITISV_033795 [Vitis vinifera] Length = 314 Score = 79.0 bits (193), Expect = 4e-13 Identities = 36/87 (41%), Positives = 50/87 (57%) Frame = -1 Query: 262 QDNSAFPKTVPLDESNYTIWAPLMRMRIGARGKIGFFTGAKVEPDMNSTEYEGWATDNEK 83 Q F + L ESNY +W+ L+ M I R K+ + G P + YE W +N+K Sbjct: 10 QSEGTFNPGIILTESNYDVWSQLVEMHITEREKLSYIRGKTNLPKESEDGYEKWYAENQK 69 Query: 82 VKSWLIDSMEISLMNRYIRLPTARDIW 2 VK WL+ SM +M RY+RLPTA++IW Sbjct: 70 VKRWLLMSMSPEIMKRYLRLPTAQEIW 96 >emb|CAN68398.1| hypothetical protein VITISV_007896 [Vitis vinifera] Length = 1077 Score = 75.9 bits (185), Expect = 3e-12 Identities = 32/86 (37%), Positives = 50/86 (58%) Frame = -1 Query: 259 DNSAFPKTVPLDESNYTIWAPLMRMRIGARGKIGFFTGAKVEPDMNSTEYEGWATDNEKV 80 D+S P + L+ SNY +W+ ++ M I + K+G+ G +P + W T N V Sbjct: 43 DSSTTPIGIKLEGSNYALWSQVVEMYISGKDKLGYINGDSPQPPETDPSFRRWRTKNAIV 102 Query: 79 KSWLIDSMEISLMNRYIRLPTARDIW 2 K WLI+SM+ SL+ +IR PTA+ +W Sbjct: 103 KGWLINSMDPSLIANFIRFPTAKQVW 128 >ref|XP_002334881.1| predicted protein [Populus trichocarpa] gi|222831996|gb|EEE70473.1| predicted protein [Populus trichocarpa] Length = 204 Score = 75.5 bits (184), Expect = 4e-12 Identities = 37/88 (42%), Positives = 54/88 (61%), Gaps = 1/88 (1%) Frame = -1 Query: 262 QDNSAFPKTVPLDESNYTIWAPLMRMRIGARGKIGFFTGAKVEP-DMNSTEYEGWATDNE 86 QD S+ LD +NY WA + +I R + GF +G+K P D NS EYE W +N Sbjct: 25 QDVSSLLTPEKLDGTNYVEWALNAQNKIRGRKRWGFISGSKTAPNDTNSEEYEAWEDENC 84 Query: 85 KVKSWLIDSMEISLMNRYIRLPTARDIW 2 +KSWL+D+M + + ++RLPTA++IW Sbjct: 85 LIKSWLLDAMNKDIRSIFLRLPTAKEIW 112