BLASTX nr result
ID: Coptis24_contig00034494
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00034494 (210 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AFU97133.1| NB-LRR resistance-like protein RC80, partial [Ger... 61 8e-08 gb|AFU97132.1| NB-LRR resistance-like protein RGC79, partial [Ge... 61 8e-08 gb|AFU97131.1| NB-LRR resistance-like protein RC78, partial [Ger... 61 8e-08 gb|AFU97079.1| NB-LRR resistance-like protein RGC26, partial [Ge... 61 8e-08 gb|AAL01035.1|AF402768_1 NBS/LRR resistance protein-like protein... 61 1e-07 >gb|AFU97133.1| NB-LRR resistance-like protein RC80, partial [Gerbera hybrid cultivar] gi|408905175|gb|AFU97134.1| NB-LRR resistance-like protein RC81, partial [Gerbera hybrid cultivar] Length = 165 Score = 61.2 bits (147), Expect = 8e-08 Identities = 28/54 (51%), Positives = 40/54 (74%) Frame = -2 Query: 203 GGVGKTTAMMNTNNRLLATKMFNKIIWVNMSKDMSLEKVQRDIAMQLNMEFEDE 42 GGVGKTT MM+ N+L+ K+F+++IWVN+SK ++EK+Q DIA N+E E Sbjct: 1 GGVGKTTIMMHIYNQLIDGKLFDRVIWVNVSKTFNVEKLQLDIANATNLELSVE 54 >gb|AFU97132.1| NB-LRR resistance-like protein RGC79, partial [Gerbera hybrid cultivar] Length = 166 Score = 61.2 bits (147), Expect = 8e-08 Identities = 28/54 (51%), Positives = 40/54 (74%) Frame = -2 Query: 203 GGVGKTTAMMNTNNRLLATKMFNKIIWVNMSKDMSLEKVQRDIAMQLNMEFEDE 42 GGVGKTT MM+ N+L+ K+F+++IWVN+SK ++EK+Q DIA N+E E Sbjct: 1 GGVGKTTIMMHIYNQLIDGKLFDRVIWVNVSKTFNVEKLQLDIANATNLELSVE 54 >gb|AFU97131.1| NB-LRR resistance-like protein RC78, partial [Gerbera hybrid cultivar] Length = 165 Score = 61.2 bits (147), Expect = 8e-08 Identities = 28/54 (51%), Positives = 40/54 (74%) Frame = -2 Query: 203 GGVGKTTAMMNTNNRLLATKMFNKIIWVNMSKDMSLEKVQRDIAMQLNMEFEDE 42 GGVGKTT MM+ N+L+ K+F+++IWVN+SK ++EK+Q DIA N+E E Sbjct: 1 GGVGKTTIMMHIYNQLIDGKLFDRVIWVNVSKTFNVEKLQLDIANATNLELSVE 54 >gb|AFU97079.1| NB-LRR resistance-like protein RGC26, partial [Gerbera hybrid cultivar] Length = 164 Score = 61.2 bits (147), Expect = 8e-08 Identities = 28/54 (51%), Positives = 40/54 (74%) Frame = -2 Query: 203 GGVGKTTAMMNTNNRLLATKMFNKIIWVNMSKDMSLEKVQRDIAMQLNMEFEDE 42 GGVGKTT MM+ N+L+ K+F+++IWVN+SK ++EK+Q DIA N+E E Sbjct: 1 GGVGKTTIMMHIYNQLIDGKLFDRVIWVNVSKTFNVEKLQLDIANATNLELSVE 54 >gb|AAL01035.1|AF402768_1 NBS/LRR resistance protein-like protein [Theobroma cacao] Length = 173 Score = 60.8 bits (146), Expect = 1e-07 Identities = 31/72 (43%), Positives = 43/72 (59%), Gaps = 3/72 (4%) Frame = -2 Query: 209 GKGGVGKTTAMMNTNNRLLATKMFNKIIWVNMSKDMSLEKVQRDIAMQLNMEFEDEAS-- 36 G GGVGKTT M + +NRLL F K+IW +S+D + ++Q DIA QL D+ + Sbjct: 1 GMGGVGKTTIMKHVHNRLLKEDKFKKLIWATVSQDFDVRRLQNDIASQLEKTLSDDKNTT 60 Query: 35 -QAAYLLRSLKK 3 +A LL L+K Sbjct: 61 IRAGELLEMLRK 72