BLASTX nr result

ID: Coptis24_contig00034475 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034475
         (383 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCH50966.1| T4.5 [Malus x robusta]                                 71   1e-16
emb|CAN80108.1| hypothetical protein VITISV_035396 [Vitis vinifera]    50   6e-13
emb|CAN82769.1| hypothetical protein VITISV_037882 [Vitis vinifera]    56   7e-13
emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]    57   8e-13
emb|CAN72533.1| hypothetical protein VITISV_007475 [Vitis vinifera]    50   1e-12

>emb|CCH50966.1| T4.5 [Malus x robusta]
          Length = 1670

 Score = 70.9 bits (172), Expect(2) = 1e-16
 Identities = 29/74 (39%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
 Frame = +3

Query: 165 SWMKQDQIVHIWVNATISESL-PYIVGLPTSKDLWTSLENRFAASSISHCHQLKERLHNT 341
           +W ++DQI+ IW+N+T+S+ L P  +G+  S+ LW SLE RF+ +S +H H L+ ++   
Sbjct: 329 TWCERDQILMIWINSTLSKDLLPLTIGMEDSRSLWQSLERRFSGASRTHVHSLRSKIQTI 388

Query: 342 KKGSLTMADYLQQV 383
            KG  +M D+L  +
Sbjct: 389 HKGDSSMTDFLNSI 402



 Score = 40.4 bits (93), Expect(2) = 1e-16
 Identities = 17/43 (39%), Positives = 24/43 (55%)
 Frame = +1

Query: 4   KFNRDNYLIWKSLFTQVILCHDLLSFVDGSSPCPQKLLLDTNG 132
           K NR NY+ W+SLF  V+    L+  V+G   CP   + D +G
Sbjct: 277 KLNRQNYITWRSLFIPVLKRFKLIGLVNGEDLCPPPFVRDPSG 319


>emb|CAN80108.1| hypothetical protein VITISV_035396 [Vitis vinifera]
          Length = 491

 Score = 50.1 bits (118), Expect(2) = 6e-13
 Identities = 23/54 (42%), Positives = 30/54 (55%)
 Frame = +1

Query: 1   VKFNRDNYLIWKSLFTQVILCHDLLSFVDGSSPCPQKLLLDTNGNETTTVNPLY 162
           +K    NYL WK  F  + + +DLL ++DGS PCP K L     N   T+NP Y
Sbjct: 29  LKLTSSNYLSWKIQFETLFIGYDLLGYIDGSKPCPPKTL---TTNNVDTLNPAY 79



 Score = 48.5 bits (114), Expect(2) = 6e-13
 Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
 Frame = +3

Query: 168 WMKQDQIVHIWVNATISESLPYIVGL----PTSKDLWTSLENRFAASSISHCHQLKERLH 335
           W++QDQ++   +NA I    P I+       TS++ WT L N +   S     Q+K  L 
Sbjct: 82  WIRQDQLI---LNALIGSLSPTIISFIARANTSREAWTILANTYVKPSRGRIKQVKNLLK 138

Query: 336 NTKKGSLTMADYLQQV 383
           N  KG++T+ D+L  V
Sbjct: 139 NPSKGTMTVTDFLHSV 154


>emb|CAN82769.1| hypothetical protein VITISV_037882 [Vitis vinifera]
          Length = 2220

 Score = 56.2 bits (134), Expect(2) = 7e-13
 Identities = 26/74 (35%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
 Frame = +3

Query: 165  SWMKQDQIVHIWVNATISESL-PYIVGLPTSKDLWTSLENRFAASSISHCHQLKERLHNT 341
            +W +QD+ +  W+ ++++ ++   I+G  +S   W +LE  F++SS +   QL+  L +T
Sbjct: 929  AWRRQDRTILSWLYSSLTPAIMAQIIGHNSSHSAWNALEKTFSSSSRARIMQLRLELQST 988

Query: 342  KKGSLTMADYLQQV 383
            KKGSL+M DY+ +V
Sbjct: 989  KKGSLSMIDYIMKV 1002



 Score = 42.0 bits (97), Expect(2) = 7e-13
 Identities = 20/55 (36%), Positives = 29/55 (52%)
 Frame = +1

Query: 1    VKFNRDNYLIWKSLFTQVILCHDLLSFVDGSSPCPQKLLLDTNGNETTTVNPLYV 165
            VK +R NY++WKS    V+  +    F+DG S CP K L       +  +NP +V
Sbjct: 880  VKLDRTNYILWKSQIDNVVFANGFEDFIDGFSICPDKEL------SSGLINPAFV 928


>emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]
          Length = 1432

 Score = 56.6 bits (135), Expect(2) = 8e-13
 Identities = 25/74 (33%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
 Frame = +3

Query: 165 SWMKQDQIVHIWVNATISESL-PYIVGLPTSKDLWTSLENRFAASSISHCHQLKERLHNT 341
           +W +QD+ +  W+ ++++  +   I+G  TS   W +LE+ F++SS +   QL+  L +T
Sbjct: 87  AWRRQDRTILSWIYSSLTPGIMAQIIGHNTSHSAWNALESIFSSSSRARIMQLRLELQST 146

Query: 342 KKGSLTMADYLQQV 383
           KKGS++M DY+ ++
Sbjct: 147 KKGSMSMIDYIMKI 160



 Score = 41.6 bits (96), Expect(2) = 8e-13
 Identities = 16/37 (43%), Positives = 24/37 (64%)
 Frame = +1

Query: 1   VKFNRDNYLIWKSLFTQVILCHDLLSFVDGSSPCPQK 111
           VK +R NY++W+S    VI  +    F+DG+S CP+K
Sbjct: 38  VKLDRTNYILWRSQIDNVIFANGFEDFIDGTSICPEK 74


>emb|CAN72533.1| hypothetical protein VITISV_007475 [Vitis vinifera]
          Length = 499

 Score = 50.4 bits (119), Expect(2) = 1e-12
 Identities = 21/56 (37%), Positives = 30/56 (53%)
 Frame = +1

Query: 1   VKFNRDNYLIWKSLFTQVILCHDLLSFVDGSSPCPQKLLLDTNGNETTTVNPLYVH 168
           +K    NYL WK  F  + + +DLL ++DGS PCP K L   N +       L++H
Sbjct: 29  LKLTSSNYLSWKIQFETLFISYDLLGYIDGSKPCPPKTLTTNNVDTLNLAYTLWIH 84



 Score = 47.4 bits (111), Expect(2) = 1e-12
 Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
 Frame = +3

Query: 168 WMKQDQIVHIWVNATISESLPYIVGL----PTSKDLWTSLENRFAASSISHCHQLKERLH 335
           W+ QDQ++   +NA I    P I+       TS++ WT L N  A  S     Q+K  L 
Sbjct: 82  WIHQDQLI---LNALIGSLSPTIISFIARANTSREAWTILANTHAKPSHGRIKQVKNLLK 138

Query: 336 NTKKGSLTMADYLQQV 383
           N  KG++T+ D+L  V
Sbjct: 139 NPSKGTMTVTDFLHSV 154


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