BLASTX nr result
ID: Coptis24_contig00034475
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00034475 (383 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CCH50966.1| T4.5 [Malus x robusta] 71 1e-16 emb|CAN80108.1| hypothetical protein VITISV_035396 [Vitis vinifera] 50 6e-13 emb|CAN82769.1| hypothetical protein VITISV_037882 [Vitis vinifera] 56 7e-13 emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera] 57 8e-13 emb|CAN72533.1| hypothetical protein VITISV_007475 [Vitis vinifera] 50 1e-12 >emb|CCH50966.1| T4.5 [Malus x robusta] Length = 1670 Score = 70.9 bits (172), Expect(2) = 1e-16 Identities = 29/74 (39%), Positives = 49/74 (66%), Gaps = 1/74 (1%) Frame = +3 Query: 165 SWMKQDQIVHIWVNATISESL-PYIVGLPTSKDLWTSLENRFAASSISHCHQLKERLHNT 341 +W ++DQI+ IW+N+T+S+ L P +G+ S+ LW SLE RF+ +S +H H L+ ++ Sbjct: 329 TWCERDQILMIWINSTLSKDLLPLTIGMEDSRSLWQSLERRFSGASRTHVHSLRSKIQTI 388 Query: 342 KKGSLTMADYLQQV 383 KG +M D+L + Sbjct: 389 HKGDSSMTDFLNSI 402 Score = 40.4 bits (93), Expect(2) = 1e-16 Identities = 17/43 (39%), Positives = 24/43 (55%) Frame = +1 Query: 4 KFNRDNYLIWKSLFTQVILCHDLLSFVDGSSPCPQKLLLDTNG 132 K NR NY+ W+SLF V+ L+ V+G CP + D +G Sbjct: 277 KLNRQNYITWRSLFIPVLKRFKLIGLVNGEDLCPPPFVRDPSG 319 >emb|CAN80108.1| hypothetical protein VITISV_035396 [Vitis vinifera] Length = 491 Score = 50.1 bits (118), Expect(2) = 6e-13 Identities = 23/54 (42%), Positives = 30/54 (55%) Frame = +1 Query: 1 VKFNRDNYLIWKSLFTQVILCHDLLSFVDGSSPCPQKLLLDTNGNETTTVNPLY 162 +K NYL WK F + + +DLL ++DGS PCP K L N T+NP Y Sbjct: 29 LKLTSSNYLSWKIQFETLFIGYDLLGYIDGSKPCPPKTL---TTNNVDTLNPAY 79 Score = 48.5 bits (114), Expect(2) = 6e-13 Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 4/76 (5%) Frame = +3 Query: 168 WMKQDQIVHIWVNATISESLPYIVGL----PTSKDLWTSLENRFAASSISHCHQLKERLH 335 W++QDQ++ +NA I P I+ TS++ WT L N + S Q+K L Sbjct: 82 WIRQDQLI---LNALIGSLSPTIISFIARANTSREAWTILANTYVKPSRGRIKQVKNLLK 138 Query: 336 NTKKGSLTMADYLQQV 383 N KG++T+ D+L V Sbjct: 139 NPSKGTMTVTDFLHSV 154 >emb|CAN82769.1| hypothetical protein VITISV_037882 [Vitis vinifera] Length = 2220 Score = 56.2 bits (134), Expect(2) = 7e-13 Identities = 26/74 (35%), Positives = 48/74 (64%), Gaps = 1/74 (1%) Frame = +3 Query: 165 SWMKQDQIVHIWVNATISESL-PYIVGLPTSKDLWTSLENRFAASSISHCHQLKERLHNT 341 +W +QD+ + W+ ++++ ++ I+G +S W +LE F++SS + QL+ L +T Sbjct: 929 AWRRQDRTILSWLYSSLTPAIMAQIIGHNSSHSAWNALEKTFSSSSRARIMQLRLELQST 988 Query: 342 KKGSLTMADYLQQV 383 KKGSL+M DY+ +V Sbjct: 989 KKGSLSMIDYIMKV 1002 Score = 42.0 bits (97), Expect(2) = 7e-13 Identities = 20/55 (36%), Positives = 29/55 (52%) Frame = +1 Query: 1 VKFNRDNYLIWKSLFTQVILCHDLLSFVDGSSPCPQKLLLDTNGNETTTVNPLYV 165 VK +R NY++WKS V+ + F+DG S CP K L + +NP +V Sbjct: 880 VKLDRTNYILWKSQIDNVVFANGFEDFIDGFSICPDKEL------SSGLINPAFV 928 >emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera] Length = 1432 Score = 56.6 bits (135), Expect(2) = 8e-13 Identities = 25/74 (33%), Positives = 48/74 (64%), Gaps = 1/74 (1%) Frame = +3 Query: 165 SWMKQDQIVHIWVNATISESL-PYIVGLPTSKDLWTSLENRFAASSISHCHQLKERLHNT 341 +W +QD+ + W+ ++++ + I+G TS W +LE+ F++SS + QL+ L +T Sbjct: 87 AWRRQDRTILSWIYSSLTPGIMAQIIGHNTSHSAWNALESIFSSSSRARIMQLRLELQST 146 Query: 342 KKGSLTMADYLQQV 383 KKGS++M DY+ ++ Sbjct: 147 KKGSMSMIDYIMKI 160 Score = 41.6 bits (96), Expect(2) = 8e-13 Identities = 16/37 (43%), Positives = 24/37 (64%) Frame = +1 Query: 1 VKFNRDNYLIWKSLFTQVILCHDLLSFVDGSSPCPQK 111 VK +R NY++W+S VI + F+DG+S CP+K Sbjct: 38 VKLDRTNYILWRSQIDNVIFANGFEDFIDGTSICPEK 74 >emb|CAN72533.1| hypothetical protein VITISV_007475 [Vitis vinifera] Length = 499 Score = 50.4 bits (119), Expect(2) = 1e-12 Identities = 21/56 (37%), Positives = 30/56 (53%) Frame = +1 Query: 1 VKFNRDNYLIWKSLFTQVILCHDLLSFVDGSSPCPQKLLLDTNGNETTTVNPLYVH 168 +K NYL WK F + + +DLL ++DGS PCP K L N + L++H Sbjct: 29 LKLTSSNYLSWKIQFETLFISYDLLGYIDGSKPCPPKTLTTNNVDTLNLAYTLWIH 84 Score = 47.4 bits (111), Expect(2) = 1e-12 Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 4/76 (5%) Frame = +3 Query: 168 WMKQDQIVHIWVNATISESLPYIVGL----PTSKDLWTSLENRFAASSISHCHQLKERLH 335 W+ QDQ++ +NA I P I+ TS++ WT L N A S Q+K L Sbjct: 82 WIHQDQLI---LNALIGSLSPTIISFIARANTSREAWTILANTHAKPSHGRIKQVKNLLK 138 Query: 336 NTKKGSLTMADYLQQV 383 N KG++T+ D+L V Sbjct: 139 NPSKGTMTVTDFLHSV 154