BLASTX nr result

ID: Coptis24_contig00034474 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034474
         (268 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523580.1| conserved hypothetical protein [Ricinus comm...   129   2e-28
emb|CBI18663.3| unnamed protein product [Vitis vinifera]              120   1e-25
ref|XP_002269745.1| PREDICTED: uncharacterized protein LOC100242...   120   1e-25
ref|XP_002325025.1| predicted protein [Populus trichocarpa] gi|2...   109   3e-22
ref|XP_003546829.1| PREDICTED: uncharacterized protein LOC100806...   105   5e-21

>ref|XP_002523580.1| conserved hypothetical protein [Ricinus communis]
           gi|223537142|gb|EEF38775.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 551

 Score =  129 bits (325), Expect = 2e-28
 Identities = 57/89 (64%), Positives = 72/89 (80%)
 Frame = -2

Query: 267 MGNCLPLHSGAIHVSKKKEVLPVETVFKLPSQLPSWPQGEGFGSGSINLGGLEVCQVSTF 88
           MGNCL +      VSKK++ LP+ET FKLPS LP WP GEGFG+G+I+LGGL+VCQ+S+ 
Sbjct: 1   MGNCLSIKD----VSKKRKTLPIETSFKLPSSLPKWPPGEGFGNGTIDLGGLQVCQISSL 56

Query: 87  SKIWATSEGGPDNHGASFFEPSPLPAGYF 1
           +K+W+T EGGPDN GASFFEPS +P G+F
Sbjct: 57  NKVWSTQEGGPDNVGASFFEPSQIPQGFF 85


>emb|CBI18663.3| unnamed protein product [Vitis vinifera]
          Length = 453

 Score =  120 bits (301), Expect = 1e-25
 Identities = 56/86 (65%), Positives = 71/86 (82%), Gaps = 1/86 (1%)
 Frame = -2

Query: 267 MGNCLPLHSGAIHVSKKKEVLPVETVFKLPSQLPSWPQGEGFGSGSINLGG-LEVCQVST 91
           MGNCL + S A  VSKK++ L +ET FKLP+ +P+WP GEGF  G+I+LGG LEVCQ+S+
Sbjct: 1   MGNCLTV-SSASDVSKKRKSLAIETSFKLPAPMPTWPPGEGFAGGTIDLGGGLEVCQISS 59

Query: 90  FSKIWATSEGGPDNHGASFFEPSPLP 13
           F+K+WAT EGGPDN GA+FFEPSP+P
Sbjct: 60  FTKVWATHEGGPDNLGATFFEPSPMP 85


>ref|XP_002269745.1| PREDICTED: uncharacterized protein LOC100242579 [Vitis vinifera]
          Length = 559

 Score =  120 bits (301), Expect = 1e-25
 Identities = 56/86 (65%), Positives = 71/86 (82%), Gaps = 1/86 (1%)
 Frame = -2

Query: 267 MGNCLPLHSGAIHVSKKKEVLPVETVFKLPSQLPSWPQGEGFGSGSINLGG-LEVCQVST 91
           MGNCL + S A  VSKK++ L +ET FKLP+ +P+WP GEGF  G+I+LGG LEVCQ+S+
Sbjct: 1   MGNCLTV-SSASDVSKKRKSLAIETSFKLPAPMPTWPPGEGFAGGTIDLGGGLEVCQISS 59

Query: 90  FSKIWATSEGGPDNHGASFFEPSPLP 13
           F+K+WAT EGGPDN GA+FFEPSP+P
Sbjct: 60  FTKVWATHEGGPDNLGATFFEPSPMP 85


>ref|XP_002325025.1| predicted protein [Populus trichocarpa] gi|222866459|gb|EEF03590.1|
           predicted protein [Populus trichocarpa]
          Length = 546

 Score =  109 bits (272), Expect = 3e-22
 Identities = 52/75 (69%), Positives = 61/75 (81%), Gaps = 1/75 (1%)
 Frame = -2

Query: 225 SKKKEVLPVETVFKLPSQLPSWPQGEGFGSGSINLG-GLEVCQVSTFSKIWATSEGGPDN 49
           S  KE LP+ T FKLPS LPS PQGEGFG+G INLG GL+VCQV + +KIWAT+EGGPDN
Sbjct: 6   SATKEALPIATPFKLPSPLPSLPQGEGFGNGIINLGSGLQVCQVVSLNKIWATNEGGPDN 65

Query: 48  HGASFFEPSPLPAGY 4
            GA+FFEPS +P G+
Sbjct: 66  LGATFFEPSQMPQGF 80


>ref|XP_003546829.1| PREDICTED: uncharacterized protein LOC100806731 [Glycine max]
          Length = 548

 Score =  105 bits (261), Expect = 5e-21
 Identities = 43/75 (57%), Positives = 60/75 (80%)
 Frame = -2

Query: 225 SKKKEVLPVETVFKLPSQLPSWPQGEGFGSGSINLGGLEVCQVSTFSKIWATSEGGPDNH 46
           S K E LP++T FKLP+ +P WPQG GF +G+IN+GGL++ Q+STF+K+W T EGGP + 
Sbjct: 7   SNKIETLPIDTTFKLPANIPVWPQGGGFATGTINIGGLKLFQISTFNKVWKTLEGGPGDA 66

Query: 45  GASFFEPSPLPAGYF 1
           GA+FFEP+ +P G+F
Sbjct: 67  GAAFFEPAGIPEGFF 81


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