BLASTX nr result

ID: Coptis24_contig00034473 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034473
         (667 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265355.2| PREDICTED: transcription factor MYB23-like [...   133   3e-29
emb|CBI24140.3| unnamed protein product [Vitis vinifera]              127   2e-27
ref|XP_002265578.1| PREDICTED: uncharacterized protein LOC100258...   120   3e-25
ref|XP_002303715.1| predicted protein [Populus trichocarpa] gi|2...   114   2e-23
ref|XP_002299386.1| predicted protein [Populus trichocarpa] gi|2...   110   3e-22

>ref|XP_002265355.2| PREDICTED: transcription factor MYB23-like [Vitis vinifera]
           gi|147854236|emb|CAN83435.1| hypothetical protein
           VITISV_010137 [Vitis vinifera]
          Length = 337

 Score =  133 bits (335), Expect = 3e-29
 Identities = 96/237 (40%), Positives = 139/237 (58%), Gaps = 19/237 (8%)
 Frame = -1

Query: 667 IAQGLDPKTHNLMPSHQIHNNIKNACNVNQFYQQPSSVFSINTQIRSDASMDMNQ--SFI 494
           I+QGLDPKTHNL+ SHQ + + K  C++ Q +QQP  VF++N Q+  DASM++N+   F+
Sbjct: 116 ISQGLDPKTHNLISSHQRNTSNKVVCSLPQPHQQPFPVFTVNQQMTDDASMEVNRLPPFV 175

Query: 493 TLLSPHASSTIHPPLP------QASMSISTLDYQNQNHVWPAANDQNSPASPYFANQSSI 332
           TL          PPLP      Q +M+I   +YQN N VW  A DQ+S  +  F   SSI
Sbjct: 176 TL----------PPLPPTQPSLQQTMAIPNSEYQNPNPVW-TAKDQSSQYTISFPCGSSI 224

Query: 331 --TPL----SSASMNPSGLGFLDHENCLWSDGGIESMVTPTEEEMNIAGQVMQQDKV--- 179
             TP+    SS+S+NP G GFLD EN +W +  +E +  P  E++       Q D+    
Sbjct: 225 GSTPIISSSSSSSVNPFGFGFLD-ENLIW-NAHVEPLEGPRLEQVQTHQYQDQHDQQKNK 282

Query: 178 --VGDQVELEARDNGQDMDTSFSECSNFDLEFMESPLISCGLMYNNMNSMDHQLSWD 14
             +G+      +  GQD+D SF + S+FDLEF+ES L+S G +  +++SMD  L+W+
Sbjct: 283 INIGEMGNDHEQKCGQDIDVSF-DSSSFDLEFVESTLLS-GAICRDLSSMD-DLAWN 336


>emb|CBI24140.3| unnamed protein product [Vitis vinifera]
          Length = 349

 Score =  127 bits (319), Expect = 2e-27
 Identities = 90/219 (41%), Positives = 127/219 (57%), Gaps = 19/219 (8%)
 Frame = -1

Query: 667 IAQGLDPKTHNLMPSHQIHNNIKNACNVNQFYQQPSSVFSINTQIRSDASMDMNQ--SFI 494
           I+QGLDPKTHNL+ SHQ + + K  C++ Q +QQP  VF++N Q+  DASM++N+   F+
Sbjct: 116 ISQGLDPKTHNLISSHQRNTSNKVVCSLPQPHQQPFPVFTVNQQMTDDASMEVNRLPPFV 175

Query: 493 TLLSPHASSTIHPPLP------QASMSISTLDYQNQNHVWPAANDQNSPASPYFANQSSI 332
           TL          PPLP      Q +M+I   +YQN N VW  A DQ+S  +  F   SSI
Sbjct: 176 TL----------PPLPPTQPSLQQTMAIPNSEYQNPNPVW-TAKDQSSQYTISFPCGSSI 224

Query: 331 --TPL----SSASMNPSGLGFLDHENCLWSDGGIESMVTPTEEEMNIAGQVMQQDKV--- 179
             TP+    SS+S+NP G GFLD EN +W +  +E +  P  E++       Q D+    
Sbjct: 225 GSTPIISSSSSSSVNPFGFGFLD-ENLIW-NAHVEPLEGPRLEQVQTHQYQDQHDQQKNK 282

Query: 178 --VGDQVELEARDNGQDMDTSFSECSNFDLEFMESPLIS 68
             +G+      +  GQD+D SF + S+FDLEF+ES L+S
Sbjct: 283 INIGEMGNDHEQKCGQDIDVSF-DSSSFDLEFVESTLLS 320


>ref|XP_002265578.1| PREDICTED: uncharacterized protein LOC100258147 [Vitis vinifera]
           gi|297738187|emb|CBI27388.3| unnamed protein product
           [Vitis vinifera]
          Length = 345

 Score =  120 bits (300), Expect = 3e-25
 Identities = 88/235 (37%), Positives = 124/235 (52%), Gaps = 18/235 (7%)
 Frame = -1

Query: 667 IAQGLDPKTHNLM-PSHQIHNNIKN--ACNVNQFYQQPSS-VFSINTQIRSDASMDMNQS 500
           IAQGLDP TH+L+ P  QI+NN  N  AC ++  +QQP++ VFS NTQ+  DA MDM   
Sbjct: 116 IAQGLDPNTHHLLLPIDQINNNNNNTNACTLSHIHQQPTALVFSSNTQMIKDAKMDMKSP 175

Query: 499 FITL----LSPHASSTIHPPLPQASMSISTLDYQNQNHVW-PAANDQNSPASPYFANQSS 335
           F+TL      P  S++IHPP      +I   ++ N N+VW    +DQN  A     N+SS
Sbjct: 176 FLTLPPLPPPPDTSNSIHPPSLHGISAIPPFEFLNPNYVWMTTVSDQNQHAVMELVNRSS 235

Query: 334 I---TPLSSASMNPSGLGFLDHENCLWSDGGIESMVTPTEEEMNIAG--QVMQQDKVV-G 173
           +   TP+    +NPSG   L+       +  +   +   E    + G  Q  ++DKV  G
Sbjct: 236 MGRSTPIGPYQINPSGFEVLE-------ENYMRDTIASLEPRKQLEGVQQQQEEDKVCEG 288

Query: 172 DQVELEARDNGQDMDTSFSECSNFDLEFMESPLISCGL-MY--NNMNSMDHQLSW 17
                +   NG+++D SF  CS FDLE   S L+ CG  MY  +  +S   QL+W
Sbjct: 289 KADNSKELRNGENIDNSFDSCS-FDLELEYSGLLPCGTGMYCSSTSSSCIDQLTW 342


>ref|XP_002303715.1| predicted protein [Populus trichocarpa] gi|222841147|gb|EEE78694.1|
           predicted protein [Populus trichocarpa]
          Length = 341

 Score =  114 bits (284), Expect = 2e-23
 Identities = 79/214 (36%), Positives = 120/214 (56%), Gaps = 8/214 (3%)
 Frame = -1

Query: 667 IAQGLDPKTHNLMPSHQIHNNIKNACNVNQF---YQQPSSVFSINTQIRSDASMDMNQSF 497
           IAQGLDPKTHNL+ ++  HNN  NAC +  +   +QQ +S F++++QI +D SMDM    
Sbjct: 130 IAQGLDPKTHNLLSNNYKHNNNNNACELISYQYSHQQTTSTFTVDSQI-NDTSMDMKAPL 188

Query: 496 ITL--LSPHASSTIHPPLPQASMSISTLDYQNQNHVWPAANDQNSPASPYFANQSSITPL 323
           I    + P   +  +PPL     SIST +YQN N +  A  +  S +S          P+
Sbjct: 189 IPFPTIPPVPDTNPYPPLLHKFSSISTCEYQNPNTL--AFLESGSKSS------IGSVPV 240

Query: 322 SSASMNPSGLGFLDHENCLWSDGG--IESMVTPTEE-EMNIAGQVMQQDKVVGDQVELEA 152
           SS++ +PS  G LD E C+W+ G   I+S+ +  E+ E  +   + + ++++G       
Sbjct: 241 SSSTSHPSEFGMLD-ETCMWAGGYELIQSIKSEKEQPEQQVELTIEKTNELIG------- 292

Query: 151 RDNGQDMDTSFSECSNFDLEFMESPLISCGLMYN 50
              GQ+M  SF E S FD +F+ES L+ CG+ YN
Sbjct: 293 --AGQNMVASF-ETSTFDFDFLESTLLPCGMYYN 323


>ref|XP_002299386.1| predicted protein [Populus trichocarpa] gi|222846644|gb|EEE84191.1|
           predicted protein [Populus trichocarpa]
          Length = 331

 Score =  110 bits (274), Expect = 3e-22
 Identities = 87/235 (37%), Positives = 121/235 (51%), Gaps = 16/235 (6%)
 Frame = -1

Query: 667 IAQGLDPKTHNLMPSHQIHNNIKNACNVNQF-YQQPSSVFSINTQIRSDASMDMNQSFIT 491
           IAQGLDP THNL+ ++  HNN  +A  ++   +QQP+S F++N+QI   +SM M    I 
Sbjct: 116 IAQGLDPNTHNLLSTNYKHNNNNDAWKLSYHSHQQPTSTFTVNSQISDISSMVMKAPPIP 175

Query: 490 LLSPHASSTIHPPLPQASMSISTLDYQNQNHVWPAANDQNSPASPYF----ANQSSI--T 329
                 +   +PPL     SI T +YQN             P +  F    A+QSSI   
Sbjct: 176 FPMIPLAPDTNPPLSHEFSSILTYEYQN-------------PRTQTFLESTASQSSIGSV 222

Query: 328 PLSSASMNPSGLGFLDHENCLWSDGGIESMVTPTEEEMNIAGQVMQQ---DKVVGDQVEL 158
           P+ S++ +PS  G LD E+C+W+ G       PT+  +    Q  QQ   +K+ G     
Sbjct: 223 PIFSSTSHPSEFGMLD-ESCMWAGG-----YDPTQSIIPEKKQPEQQVGIEKITGH---- 272

Query: 157 EARDNGQDMDTSFSECSN------FDLEFMESPLISCGLMYNNMNSMDHQLSWDS 11
           E    GQ+MD SF E SN      FD +F+ES L+ CG+ YN   S   QL+WDS
Sbjct: 273 ELTSAGQNMDASF-ETSNFDFDFDFDFDFVESTLLPCGMYYN--QSPIDQLAWDS 324


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