BLASTX nr result
ID: Coptis24_contig00034467
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00034467
(286 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI38188.3| unnamed protein product [Vitis vinifera] 134 1e-29
emb|CAN71462.1| hypothetical protein VITISV_018656 [Vitis vinifera] 134 1e-29
ref|XP_002512645.1| pentatricopeptide repeat-containing protein,... 130 9e-29
ref|XP_002304652.1| predicted protein [Populus trichocarpa] gi|2... 121 5e-26
ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat... 117 8e-25
>emb|CBI38188.3| unnamed protein product [Vitis vinifera]
Length = 744
Score = 134 bits (336), Expect = 1e-29
Identities = 63/95 (66%), Positives = 75/95 (78%)
Frame = -2
Query: 285 NNYTFASTLKACTGLAAVDLGKSIHGCALKTCYDMDHYVGANLLDMYTKCGDFDAALAVF 106
NN+TFAS KAC GL A D+GKS+HGCALK+ Y++D YVG LLD+YTK GD D A F
Sbjct: 239 NNFTFASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDARRAF 298
Query: 105 NGMPNKDVILWSFMIARYAQSGKSEEAVELYFQMR 1
+P KDVI WSFMIARYAQS +S+EAVE++FQMR
Sbjct: 299 EEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMR 333
Score = 69.7 bits (169), Expect = 2e-10
Identities = 33/95 (34%), Positives = 55/95 (57%)
Frame = -2
Query: 285 NNYTFASTLKACTGLAAVDLGKSIHGCALKTCYDMDHYVGANLLDMYTKCGDFDAALAVF 106
N + F + LK +LG IH C K ++ + +VG L+D Y+ CG D A VF
Sbjct: 138 NPFVFTTILKLLVSTDCGELGWGIHACIFKLGHESNAFVGTALIDAYSVCGRVDVAREVF 197
Query: 105 NGMPNKDVILWSFMIARYAQSGKSEEAVELYFQMR 1
+G+ KD++ W+ M+ +A++ +EA++L+ QMR
Sbjct: 198 DGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMR 232
Score = 68.9 bits (167), Expect = 4e-10
Identities = 31/94 (32%), Positives = 54/94 (57%)
Frame = -2
Query: 285 NNYTFASTLKACTGLAAVDLGKSIHGCALKTCYDMDHYVGANLLDMYTKCGDFDAALAVF 106
N +TFAS L+AC + ++LG IH +K D +V L+D+Y KCG + ++ +F
Sbjct: 340 NQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELF 399
Query: 105 NGMPNKDVILWSFMIARYAQSGKSEEAVELYFQM 4
P+++ + W+ +I + Q G E+A+ L+ M
Sbjct: 400 AESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNM 433
>emb|CAN71462.1| hypothetical protein VITISV_018656 [Vitis vinifera]
Length = 787
Score = 134 bits (336), Expect = 1e-29
Identities = 63/95 (66%), Positives = 75/95 (78%)
Frame = -2
Query: 285 NNYTFASTLKACTGLAAVDLGKSIHGCALKTCYDMDHYVGANLLDMYTKCGDFDAALAVF 106
NN+TFAS KAC GL A D+GKS+HGCALK+ Y++D YVG LLD+YTK GD D A F
Sbjct: 239 NNFTFASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDARXAF 298
Query: 105 NGMPNKDVILWSFMIARYAQSGKSEEAVELYFQMR 1
+P KDVI WSFMIARYAQS +S+EAVE++FQMR
Sbjct: 299 EEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMR 333
Score = 70.9 bits (172), Expect = 1e-10
Identities = 33/95 (34%), Positives = 56/95 (58%)
Frame = -2
Query: 285 NNYTFASTLKACTGLAAVDLGKSIHGCALKTCYDMDHYVGANLLDMYTKCGDFDAALAVF 106
N + F + LK + +LG IH C K ++ + +VG L+D Y+ CG D A VF
Sbjct: 138 NPFVFTTILKLLVSMDCGELGWGIHACIFKLGHESNAFVGTALIDAYSVCGRVDVAREVF 197
Query: 105 NGMPNKDVILWSFMIARYAQSGKSEEAVELYFQMR 1
+G+ KD++ W+ M+ +A++ +EA++L+ QMR
Sbjct: 198 DGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMR 232
Score = 68.6 bits (166), Expect = 5e-10
Identities = 33/79 (41%), Positives = 47/79 (59%)
Frame = -2
Query: 276 TFASTLKACTGLAAVDLGKSIHGCALKTCYDMDHYVGANLLDMYTKCGDFDAALAVFNGM 97
T++S L+AC LAA++ G IH +KT +D D V L+DMY KCG A VF+ M
Sbjct: 445 TYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLM 504
Query: 96 PNKDVILWSFMIARYAQSG 40
+D + W+ MI+ Y+ G
Sbjct: 505 NKQDEVSWNAMISGYSMHG 523
Score = 66.6 bits (161), Expect = 2e-09
Identities = 33/95 (34%), Positives = 54/95 (56%), Gaps = 1/95 (1%)
Frame = -2
Query: 285 NNYTFASTLKACTGLAAVDLGKSIHGCALKTCYDMDHYVGANLLDMYTKCGDFDAALAVF 106
N +TFAS L+AC + ++LG IH +K D +V L+D+Y KCG + ++ +F
Sbjct: 340 NQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMXLF 399
Query: 105 NGMPNK-DVILWSFMIARYAQSGKSEEAVELYFQM 4
P++ DV W+ +I + Q G E+A+ L+ M
Sbjct: 400 AESPHRNDVTPWNTVIVGHVQLGDGEKALRLFLNM 434
>ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223548606|gb|EEF50097.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 716
Score = 130 bits (328), Expect = 9e-29
Identities = 62/95 (65%), Positives = 72/95 (75%)
Frame = -2
Query: 285 NNYTFASTLKACTGLAAVDLGKSIHGCALKTCYDMDHYVGANLLDMYTKCGDFDAALAVF 106
N++TFA LKAC GL A +GKS+HGC LKTCY+MD YVG LLD+YTK GD + L VF
Sbjct: 141 NHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVGVGLLDLYTKFGDANDVLRVF 200
Query: 105 NGMPNKDVILWSFMIARYAQSGKSEEAVELYFQMR 1
MP DVI WSFMI+RYAQS +S EAVEL+ QMR
Sbjct: 201 EEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMR 235
Score = 82.0 bits (201), Expect = 5e-14
Identities = 40/92 (43%), Positives = 57/92 (61%)
Frame = -2
Query: 276 TFASTLKACTGLAAVDLGKSIHGCALKTCYDMDHYVGANLLDMYTKCGDFDAALAVFNGM 97
T++S L+AC LAA++LG IH +LKT YD D VG L+DMY KCG A VF+ +
Sbjct: 346 TYSSVLRACASLAAMELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDML 405
Query: 96 PNKDVILWSFMIARYAQSGKSEEAVELYFQMR 1
+D I W+ MI+ Y+ G EA++ + M+
Sbjct: 406 SERDEISWNAMISGYSMHGLVGEALKAFQMMQ 437
Score = 80.1 bits (196), Expect = 2e-13
Identities = 36/94 (38%), Positives = 57/94 (60%)
Frame = -2
Query: 285 NNYTFASTLKACTGLAAVDLGKSIHGCALKTCYDMDHYVGANLLDMYTKCGDFDAALAVF 106
N +TFAS L++C + + LGK +H LK D + +V L+D+Y KCG D ++ +F
Sbjct: 242 NQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLF 301
Query: 105 NGMPNKDVILWSFMIARYAQSGKSEEAVELYFQM 4
+PN++ + W+ MI Y QSG ++A+ LY M
Sbjct: 302 MELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNM 335
Score = 68.2 bits (165), Expect = 7e-10
Identities = 28/95 (29%), Positives = 56/95 (58%)
Frame = -2
Query: 285 NNYTFASTLKACTGLAAVDLGKSIHGCALKTCYDMDHYVGANLLDMYTKCGDFDAALAVF 106
N + F + LK + +L S+H C K ++ + +VG L+D Y CG ++A F
Sbjct: 40 NPFVFTTILKLLVSVECAELAYSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAF 99
Query: 105 NGMPNKDVILWSFMIARYAQSGKSEEAVELYFQMR 1
+ + KD++ W+ M+A YA++ + +++++L+ +MR
Sbjct: 100 DAIACKDMVSWTGMVACYAENDRFQDSLQLFAEMR 134
>ref|XP_002304652.1| predicted protein [Populus trichocarpa] gi|222842084|gb|EEE79631.1|
predicted protein [Populus trichocarpa]
Length = 820
Score = 121 bits (304), Expect = 5e-26
Identities = 57/95 (60%), Positives = 71/95 (74%)
Frame = -2
Query: 285 NNYTFASTLKACTGLAAVDLGKSIHGCALKTCYDMDHYVGANLLDMYTKCGDFDAALAVF 106
NN+TFAS LKAC GL ++GK++HGCA KT Y + +VG L+D+Y K GD D AL VF
Sbjct: 245 NNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEELFVGVELIDLYIKSGDVDDALQVF 304
Query: 105 NGMPNKDVILWSFMIARYAQSGKSEEAVELYFQMR 1
MP DVI WSFMIARYAQS +SEEA+E++ +MR
Sbjct: 305 EEMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMR 339
Score = 75.9 bits (185), Expect = 3e-12
Identities = 36/91 (39%), Positives = 56/91 (61%)
Frame = -2
Query: 276 TFASTLKACTGLAAVDLGKSIHGCALKTCYDMDHYVGANLLDMYTKCGDFDAALAVFNGM 97
T++S L+AC G+AA++ G IH ++KT YD + VG L+DMY KCG+ A VF+ +
Sbjct: 450 TYSSVLRACAGIAALEPGSQIHSLSVKTIYDKNTVVGNALIDMYAKCGNIKDARLVFDML 509
Query: 96 PNKDVILWSFMIARYAQSGKSEEAVELYFQM 4
D + W+ MI+ Y+ G EA++ + M
Sbjct: 510 REHDQVSWNAMISGYSVHGLYGEALKTFESM 540
Score = 73.6 bits (179), Expect = 2e-11
Identities = 36/94 (38%), Positives = 54/94 (57%)
Frame = -2
Query: 285 NNYTFASTLKACTGLAAVDLGKSIHGCALKTCYDMDHYVGANLLDMYTKCGDFDAALAVF 106
N +T AS L+AC L + LG IH +K DM+ +V L+DMY KCG + +L +F
Sbjct: 346 NQFTLASLLQACASLVDLQLGNQIHCHVVKVGLDMNVFVSNALMDMYAKCGRMENSLQLF 405
Query: 105 NGMPNKDVILWSFMIARYAQSGKSEEAVELYFQM 4
+ PN + W+ +I Y Q+G E+A+ L+ M
Sbjct: 406 SESPNCTDVSWNTVIVGYVQAGNGEKALILFKDM 439
Score = 70.9 bits (172), Expect = 1e-10
Identities = 33/95 (34%), Positives = 55/95 (57%)
Frame = -2
Query: 285 NNYTFASTLKACTGLAAVDLGKSIHGCALKTCYDMDHYVGANLLDMYTKCGDFDAALAVF 106
N + F++ LK LG S+H C K +D D +VG L+D Y+ CG + A VF
Sbjct: 144 NPFVFSTVLKLLVSAEWAKLGFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVF 203
Query: 105 NGMPNKDVILWSFMIARYAQSGKSEEAVELYFQMR 1
+ + KD++ W+ M+A Y ++ EE+++L+ +MR
Sbjct: 204 DAIEYKDMVSWTGMVACYVENECFEESLKLFSRMR 238
>ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
gi|449515059|ref|XP_004164567.1| PREDICTED: putative
pentatricopeptide repeat-containing protein At5g13230,
mitochondrial-like [Cucumis sativus]
Length = 721
Score = 117 bits (294), Expect = 8e-25
Identities = 55/95 (57%), Positives = 69/95 (72%)
Frame = -2
Query: 285 NNYTFASTLKACTGLAAVDLGKSIHGCALKTCYDMDHYVGANLLDMYTKCGDFDAALAVF 106
NN+TFA LKAC GL D GK++H LKT Y+ D YVG LL++YT+CGD D A F
Sbjct: 146 NNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYERDLYVGVGLLELYTRCGDNDDAWRAF 205
Query: 105 NGMPNKDVILWSFMIARYAQSGKSEEAVELYFQMR 1
MP DVI WSFMI+R+AQSG+SE+A+E++ QMR
Sbjct: 206 GDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMR 240
Score = 73.2 bits (178), Expect = 2e-11
Identities = 34/95 (35%), Positives = 55/95 (57%)
Frame = -2
Query: 285 NNYTFASTLKACTGLAAVDLGKSIHGCALKTCYDMDHYVGANLLDMYTKCGDFDAALAVF 106
N + F + LK + +LG+ +HGC LK Y + ++G L+D Y+ G A VF
Sbjct: 45 NPFVFTTVLKLLVSMEWAELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVF 104
Query: 105 NGMPNKDVILWSFMIARYAQSGKSEEAVELYFQMR 1
+ + +KD++ W+ MIA YA++ EA+E + QMR
Sbjct: 105 DEISSKDMVSWTGMIASYAENDCFSEALEFFSQMR 139
Score = 71.2 bits (173), Expect = 8e-11
Identities = 34/92 (36%), Positives = 54/92 (58%)
Frame = -2
Query: 276 TFASTLKACTGLAAVDLGKSIHGCALKTCYDMDHYVGANLLDMYTKCGDFDAALAVFNGM 97
T++S L+AC LAA++LG +H KT Y D VG L+DMY KCG A +F+ +
Sbjct: 351 TYSSILRACATLAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDML 410
Query: 96 PNKDVILWSFMIARYAQSGKSEEAVELYFQMR 1
+D + W+ +I Y+ G EA++++ M+
Sbjct: 411 DLRDKVSWNAIICGYSMHGLGVEAIKMFNLMK 442
Score = 69.7 bits (169), Expect = 2e-10
Identities = 32/94 (34%), Positives = 54/94 (57%)
Frame = -2
Query: 285 NNYTFASTLKACTGLAAVDLGKSIHGCALKTCYDMDHYVGANLLDMYTKCGDFDAALAVF 106
N +TF+S L+A + ++DL K+IHG ALK D +V L+ Y KCG + ++ +F
Sbjct: 247 NQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGCIEQSMELF 306
Query: 105 NGMPNKDVILWSFMIARYAQSGKSEEAVELYFQM 4
+ +++ + W+ +I Y Q G E A+ L+ M
Sbjct: 307 EALSDRNDVSWNTIIVSYVQLGDGERALSLFSNM 340