BLASTX nr result
ID: Coptis24_contig00034467
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00034467 (286 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI38188.3| unnamed protein product [Vitis vinifera] 134 1e-29 emb|CAN71462.1| hypothetical protein VITISV_018656 [Vitis vinifera] 134 1e-29 ref|XP_002512645.1| pentatricopeptide repeat-containing protein,... 130 9e-29 ref|XP_002304652.1| predicted protein [Populus trichocarpa] gi|2... 121 5e-26 ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat... 117 8e-25 >emb|CBI38188.3| unnamed protein product [Vitis vinifera] Length = 744 Score = 134 bits (336), Expect = 1e-29 Identities = 63/95 (66%), Positives = 75/95 (78%) Frame = -2 Query: 285 NNYTFASTLKACTGLAAVDLGKSIHGCALKTCYDMDHYVGANLLDMYTKCGDFDAALAVF 106 NN+TFAS KAC GL A D+GKS+HGCALK+ Y++D YVG LLD+YTK GD D A F Sbjct: 239 NNFTFASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDARRAF 298 Query: 105 NGMPNKDVILWSFMIARYAQSGKSEEAVELYFQMR 1 +P KDVI WSFMIARYAQS +S+EAVE++FQMR Sbjct: 299 EEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMR 333 Score = 69.7 bits (169), Expect = 2e-10 Identities = 33/95 (34%), Positives = 55/95 (57%) Frame = -2 Query: 285 NNYTFASTLKACTGLAAVDLGKSIHGCALKTCYDMDHYVGANLLDMYTKCGDFDAALAVF 106 N + F + LK +LG IH C K ++ + +VG L+D Y+ CG D A VF Sbjct: 138 NPFVFTTILKLLVSTDCGELGWGIHACIFKLGHESNAFVGTALIDAYSVCGRVDVAREVF 197 Query: 105 NGMPNKDVILWSFMIARYAQSGKSEEAVELYFQMR 1 +G+ KD++ W+ M+ +A++ +EA++L+ QMR Sbjct: 198 DGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMR 232 Score = 68.9 bits (167), Expect = 4e-10 Identities = 31/94 (32%), Positives = 54/94 (57%) Frame = -2 Query: 285 NNYTFASTLKACTGLAAVDLGKSIHGCALKTCYDMDHYVGANLLDMYTKCGDFDAALAVF 106 N +TFAS L+AC + ++LG IH +K D +V L+D+Y KCG + ++ +F Sbjct: 340 NQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELF 399 Query: 105 NGMPNKDVILWSFMIARYAQSGKSEEAVELYFQM 4 P+++ + W+ +I + Q G E+A+ L+ M Sbjct: 400 AESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNM 433 >emb|CAN71462.1| hypothetical protein VITISV_018656 [Vitis vinifera] Length = 787 Score = 134 bits (336), Expect = 1e-29 Identities = 63/95 (66%), Positives = 75/95 (78%) Frame = -2 Query: 285 NNYTFASTLKACTGLAAVDLGKSIHGCALKTCYDMDHYVGANLLDMYTKCGDFDAALAVF 106 NN+TFAS KAC GL A D+GKS+HGCALK+ Y++D YVG LLD+YTK GD D A F Sbjct: 239 NNFTFASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDARXAF 298 Query: 105 NGMPNKDVILWSFMIARYAQSGKSEEAVELYFQMR 1 +P KDVI WSFMIARYAQS +S+EAVE++FQMR Sbjct: 299 EEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMR 333 Score = 70.9 bits (172), Expect = 1e-10 Identities = 33/95 (34%), Positives = 56/95 (58%) Frame = -2 Query: 285 NNYTFASTLKACTGLAAVDLGKSIHGCALKTCYDMDHYVGANLLDMYTKCGDFDAALAVF 106 N + F + LK + +LG IH C K ++ + +VG L+D Y+ CG D A VF Sbjct: 138 NPFVFTTILKLLVSMDCGELGWGIHACIFKLGHESNAFVGTALIDAYSVCGRVDVAREVF 197 Query: 105 NGMPNKDVILWSFMIARYAQSGKSEEAVELYFQMR 1 +G+ KD++ W+ M+ +A++ +EA++L+ QMR Sbjct: 198 DGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMR 232 Score = 68.6 bits (166), Expect = 5e-10 Identities = 33/79 (41%), Positives = 47/79 (59%) Frame = -2 Query: 276 TFASTLKACTGLAAVDLGKSIHGCALKTCYDMDHYVGANLLDMYTKCGDFDAALAVFNGM 97 T++S L+AC LAA++ G IH +KT +D D V L+DMY KCG A VF+ M Sbjct: 445 TYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLM 504 Query: 96 PNKDVILWSFMIARYAQSG 40 +D + W+ MI+ Y+ G Sbjct: 505 NKQDEVSWNAMISGYSMHG 523 Score = 66.6 bits (161), Expect = 2e-09 Identities = 33/95 (34%), Positives = 54/95 (56%), Gaps = 1/95 (1%) Frame = -2 Query: 285 NNYTFASTLKACTGLAAVDLGKSIHGCALKTCYDMDHYVGANLLDMYTKCGDFDAALAVF 106 N +TFAS L+AC + ++LG IH +K D +V L+D+Y KCG + ++ +F Sbjct: 340 NQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMXLF 399 Query: 105 NGMPNK-DVILWSFMIARYAQSGKSEEAVELYFQM 4 P++ DV W+ +I + Q G E+A+ L+ M Sbjct: 400 AESPHRNDVTPWNTVIVGHVQLGDGEKALRLFLNM 434 >ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 716 Score = 130 bits (328), Expect = 9e-29 Identities = 62/95 (65%), Positives = 72/95 (75%) Frame = -2 Query: 285 NNYTFASTLKACTGLAAVDLGKSIHGCALKTCYDMDHYVGANLLDMYTKCGDFDAALAVF 106 N++TFA LKAC GL A +GKS+HGC LKTCY+MD YVG LLD+YTK GD + L VF Sbjct: 141 NHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVGVGLLDLYTKFGDANDVLRVF 200 Query: 105 NGMPNKDVILWSFMIARYAQSGKSEEAVELYFQMR 1 MP DVI WSFMI+RYAQS +S EAVEL+ QMR Sbjct: 201 EEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMR 235 Score = 82.0 bits (201), Expect = 5e-14 Identities = 40/92 (43%), Positives = 57/92 (61%) Frame = -2 Query: 276 TFASTLKACTGLAAVDLGKSIHGCALKTCYDMDHYVGANLLDMYTKCGDFDAALAVFNGM 97 T++S L+AC LAA++LG IH +LKT YD D VG L+DMY KCG A VF+ + Sbjct: 346 TYSSVLRACASLAAMELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDML 405 Query: 96 PNKDVILWSFMIARYAQSGKSEEAVELYFQMR 1 +D I W+ MI+ Y+ G EA++ + M+ Sbjct: 406 SERDEISWNAMISGYSMHGLVGEALKAFQMMQ 437 Score = 80.1 bits (196), Expect = 2e-13 Identities = 36/94 (38%), Positives = 57/94 (60%) Frame = -2 Query: 285 NNYTFASTLKACTGLAAVDLGKSIHGCALKTCYDMDHYVGANLLDMYTKCGDFDAALAVF 106 N +TFAS L++C + + LGK +H LK D + +V L+D+Y KCG D ++ +F Sbjct: 242 NQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLF 301 Query: 105 NGMPNKDVILWSFMIARYAQSGKSEEAVELYFQM 4 +PN++ + W+ MI Y QSG ++A+ LY M Sbjct: 302 MELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNM 335 Score = 68.2 bits (165), Expect = 7e-10 Identities = 28/95 (29%), Positives = 56/95 (58%) Frame = -2 Query: 285 NNYTFASTLKACTGLAAVDLGKSIHGCALKTCYDMDHYVGANLLDMYTKCGDFDAALAVF 106 N + F + LK + +L S+H C K ++ + +VG L+D Y CG ++A F Sbjct: 40 NPFVFTTILKLLVSVECAELAYSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAF 99 Query: 105 NGMPNKDVILWSFMIARYAQSGKSEEAVELYFQMR 1 + + KD++ W+ M+A YA++ + +++++L+ +MR Sbjct: 100 DAIACKDMVSWTGMVACYAENDRFQDSLQLFAEMR 134 >ref|XP_002304652.1| predicted protein [Populus trichocarpa] gi|222842084|gb|EEE79631.1| predicted protein [Populus trichocarpa] Length = 820 Score = 121 bits (304), Expect = 5e-26 Identities = 57/95 (60%), Positives = 71/95 (74%) Frame = -2 Query: 285 NNYTFASTLKACTGLAAVDLGKSIHGCALKTCYDMDHYVGANLLDMYTKCGDFDAALAVF 106 NN+TFAS LKAC GL ++GK++HGCA KT Y + +VG L+D+Y K GD D AL VF Sbjct: 245 NNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEELFVGVELIDLYIKSGDVDDALQVF 304 Query: 105 NGMPNKDVILWSFMIARYAQSGKSEEAVELYFQMR 1 MP DVI WSFMIARYAQS +SEEA+E++ +MR Sbjct: 305 EEMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMR 339 Score = 75.9 bits (185), Expect = 3e-12 Identities = 36/91 (39%), Positives = 56/91 (61%) Frame = -2 Query: 276 TFASTLKACTGLAAVDLGKSIHGCALKTCYDMDHYVGANLLDMYTKCGDFDAALAVFNGM 97 T++S L+AC G+AA++ G IH ++KT YD + VG L+DMY KCG+ A VF+ + Sbjct: 450 TYSSVLRACAGIAALEPGSQIHSLSVKTIYDKNTVVGNALIDMYAKCGNIKDARLVFDML 509 Query: 96 PNKDVILWSFMIARYAQSGKSEEAVELYFQM 4 D + W+ MI+ Y+ G EA++ + M Sbjct: 510 REHDQVSWNAMISGYSVHGLYGEALKTFESM 540 Score = 73.6 bits (179), Expect = 2e-11 Identities = 36/94 (38%), Positives = 54/94 (57%) Frame = -2 Query: 285 NNYTFASTLKACTGLAAVDLGKSIHGCALKTCYDMDHYVGANLLDMYTKCGDFDAALAVF 106 N +T AS L+AC L + LG IH +K DM+ +V L+DMY KCG + +L +F Sbjct: 346 NQFTLASLLQACASLVDLQLGNQIHCHVVKVGLDMNVFVSNALMDMYAKCGRMENSLQLF 405 Query: 105 NGMPNKDVILWSFMIARYAQSGKSEEAVELYFQM 4 + PN + W+ +I Y Q+G E+A+ L+ M Sbjct: 406 SESPNCTDVSWNTVIVGYVQAGNGEKALILFKDM 439 Score = 70.9 bits (172), Expect = 1e-10 Identities = 33/95 (34%), Positives = 55/95 (57%) Frame = -2 Query: 285 NNYTFASTLKACTGLAAVDLGKSIHGCALKTCYDMDHYVGANLLDMYTKCGDFDAALAVF 106 N + F++ LK LG S+H C K +D D +VG L+D Y+ CG + A VF Sbjct: 144 NPFVFSTVLKLLVSAEWAKLGFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVF 203 Query: 105 NGMPNKDVILWSFMIARYAQSGKSEEAVELYFQMR 1 + + KD++ W+ M+A Y ++ EE+++L+ +MR Sbjct: 204 DAIEYKDMVSWTGMVACYVENECFEESLKLFSRMR 238 >ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial-like [Cucumis sativus] gi|449515059|ref|XP_004164567.1| PREDICTED: putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial-like [Cucumis sativus] Length = 721 Score = 117 bits (294), Expect = 8e-25 Identities = 55/95 (57%), Positives = 69/95 (72%) Frame = -2 Query: 285 NNYTFASTLKACTGLAAVDLGKSIHGCALKTCYDMDHYVGANLLDMYTKCGDFDAALAVF 106 NN+TFA LKAC GL D GK++H LKT Y+ D YVG LL++YT+CGD D A F Sbjct: 146 NNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYERDLYVGVGLLELYTRCGDNDDAWRAF 205 Query: 105 NGMPNKDVILWSFMIARYAQSGKSEEAVELYFQMR 1 MP DVI WSFMI+R+AQSG+SE+A+E++ QMR Sbjct: 206 GDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMR 240 Score = 73.2 bits (178), Expect = 2e-11 Identities = 34/95 (35%), Positives = 55/95 (57%) Frame = -2 Query: 285 NNYTFASTLKACTGLAAVDLGKSIHGCALKTCYDMDHYVGANLLDMYTKCGDFDAALAVF 106 N + F + LK + +LG+ +HGC LK Y + ++G L+D Y+ G A VF Sbjct: 45 NPFVFTTVLKLLVSMEWAELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVF 104 Query: 105 NGMPNKDVILWSFMIARYAQSGKSEEAVELYFQMR 1 + + +KD++ W+ MIA YA++ EA+E + QMR Sbjct: 105 DEISSKDMVSWTGMIASYAENDCFSEALEFFSQMR 139 Score = 71.2 bits (173), Expect = 8e-11 Identities = 34/92 (36%), Positives = 54/92 (58%) Frame = -2 Query: 276 TFASTLKACTGLAAVDLGKSIHGCALKTCYDMDHYVGANLLDMYTKCGDFDAALAVFNGM 97 T++S L+AC LAA++LG +H KT Y D VG L+DMY KCG A +F+ + Sbjct: 351 TYSSILRACATLAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDML 410 Query: 96 PNKDVILWSFMIARYAQSGKSEEAVELYFQMR 1 +D + W+ +I Y+ G EA++++ M+ Sbjct: 411 DLRDKVSWNAIICGYSMHGLGVEAIKMFNLMK 442 Score = 69.7 bits (169), Expect = 2e-10 Identities = 32/94 (34%), Positives = 54/94 (57%) Frame = -2 Query: 285 NNYTFASTLKACTGLAAVDLGKSIHGCALKTCYDMDHYVGANLLDMYTKCGDFDAALAVF 106 N +TF+S L+A + ++DL K+IHG ALK D +V L+ Y KCG + ++ +F Sbjct: 247 NQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGCIEQSMELF 306 Query: 105 NGMPNKDVILWSFMIARYAQSGKSEEAVELYFQM 4 + +++ + W+ +I Y Q G E A+ L+ M Sbjct: 307 EALSDRNDVSWNTIIVSYVQLGDGERALSLFSNM 340