BLASTX nr result

ID: Coptis24_contig00034443 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034443
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316825.1| predicted protein [Populus trichocarpa] gi|2...   122   4e-26
ref|XP_002522581.1| hypothetical protein RCOM_1015180 [Ricinus c...   119   2e-25
emb|CBI30685.3| unnamed protein product [Vitis vinifera]              118   4e-25
ref|XP_002266486.1| PREDICTED: protein SCAR3-like [Vitis vinifera]    118   4e-25
ref|XP_003629765.1| SCAR-like protein [Medicago truncatula] gi|3...   117   8e-25

>ref|XP_002316825.1| predicted protein [Populus trichocarpa] gi|222859890|gb|EEE97437.1|
           predicted protein [Populus trichocarpa]
          Length = 937

 Score =  122 bits (305), Expect = 4e-26
 Identities = 59/111 (53%), Positives = 76/111 (68%), Gaps = 6/111 (5%)
 Frame = +1

Query: 7   HIVQTDLPSFIMDSYEECRDPPSLHLLDKFDIGGPGACLKRYSDPSFFKRALPSS----- 171
           H +  DLP FIMDSYEECRDPP LHLLDKFD GGPG+CLKRYSDP+FF+RA  ++     
Sbjct: 55  HFIYNDLPRFIMDSYEECRDPPRLHLLDKFDTGGPGSCLKRYSDPTFFRRASSNATEPDA 114

Query: 172 -EVQLEKKVHQSKKKRVQQRNIGIPRAELISQLNGRMQFTSPIVSEQNSVS 321
            +V  +K+  ++KKK   QRN        +S  +GRMQFT+P ++ Q + S
Sbjct: 115 VKVPKDKRARETKKKHSSQRNRDSAHHASMSNHSGRMQFTTPTINGQTTPS 165


>ref|XP_002522581.1| hypothetical protein RCOM_1015180 [Ricinus communis]
           gi|223538272|gb|EEF39881.1| hypothetical protein
           RCOM_1015180 [Ricinus communis]
          Length = 1111

 Score =  119 bits (299), Expect = 2e-25
 Identities = 61/111 (54%), Positives = 76/111 (68%), Gaps = 6/111 (5%)
 Frame = +1

Query: 7   HIVQTDLPSFIMDSYEECRDPPSLHLLDKFDIGGPGACLKRYSDPSFFKRAL-----PSS 171
           H +  DLP FIMDSYEEC DPP LHLLDKFD GGPG+CLKRYSDP+FF+RA      P +
Sbjct: 120 HFIYNDLPRFIMDSYEECSDPPRLHLLDKFDTGGPGSCLKRYSDPTFFRRASGNFKEPDA 179

Query: 172 E-VQLEKKVHQSKKKRVQQRNIGIPRAELISQLNGRMQFTSPIVSEQNSVS 321
           E V+ EKKV ++KKKR  QRN+    +  +   + RM F+ P V+ + S S
Sbjct: 180 EKVRKEKKVRKTKKKRSSQRNVDFLSSASMLNQSARMPFSIPTVNGRTSPS 230


>emb|CBI30685.3| unnamed protein product [Vitis vinifera]
          Length = 841

 Score =  118 bits (296), Expect = 4e-25
 Identities = 64/110 (58%), Positives = 75/110 (68%), Gaps = 5/110 (4%)
 Frame = +1

Query: 7   HIVQTDLPSFIMDSYEECRDPPSLHLLDKFDIGGPGACLKRYSDPSFFKRA-LPSSEVQL 183
           H +  DLP FIMDSYEECRDPP LHLLDKFD GG G+CLKRYSDP+FF+RA + S E   
Sbjct: 120 HFIYHDLPRFIMDSYEECRDPPRLHLLDKFDTGGLGSCLKRYSDPTFFRRASVGSDEANA 179

Query: 184 EK----KVHQSKKKRVQQRNIGIPRAELISQLNGRMQFTSPIVSEQNSVS 321
           EK    K  + KKKR  QRN  + R+  IS  +GR+Q+TS  V  Q S S
Sbjct: 180 EKAQRDKARKIKKKRSLQRNGELSRSASISNRSGRVQYTSANVRGQTSPS 229


>ref|XP_002266486.1| PREDICTED: protein SCAR3-like [Vitis vinifera]
          Length = 1135

 Score =  118 bits (296), Expect = 4e-25
 Identities = 64/110 (58%), Positives = 75/110 (68%), Gaps = 5/110 (4%)
 Frame = +1

Query: 7   HIVQTDLPSFIMDSYEECRDPPSLHLLDKFDIGGPGACLKRYSDPSFFKRA-LPSSEVQL 183
           H +  DLP FIMDSYEECRDPP LHLLDKFD GG G+CLKRYSDP+FF+RA + S E   
Sbjct: 120 HFIYHDLPRFIMDSYEECRDPPRLHLLDKFDTGGLGSCLKRYSDPTFFRRASVGSDEANA 179

Query: 184 EK----KVHQSKKKRVQQRNIGIPRAELISQLNGRMQFTSPIVSEQNSVS 321
           EK    K  + KKKR  QRN  + R+  IS  +GR+Q+TS  V  Q S S
Sbjct: 180 EKAQRDKARKIKKKRSLQRNGELSRSASISNRSGRVQYTSANVRGQTSPS 229


>ref|XP_003629765.1| SCAR-like protein [Medicago truncatula] gi|355523787|gb|AET04241.1|
           SCAR-like protein [Medicago truncatula]
          Length = 1210

 Score =  117 bits (294), Expect = 8e-25
 Identities = 56/109 (51%), Positives = 73/109 (66%), Gaps = 6/109 (5%)
 Frame = +1

Query: 7   HIVQTDLPSFIMDSYEECRDPPSLHLLDKFDIGGPGACLKRYSDPSFFKRALPSSEVQLE 186
           H +  DLP FIMDSYEECRDPP +HLLDKFD GGPG+C +RYSDP+FFKR    SE +  
Sbjct: 120 HFIYNDLPPFIMDSYEECRDPPRMHLLDKFDTGGPGSCFRRYSDPTFFKRVSADSEERYS 179

Query: 187 KKVHQS------KKKRVQQRNIGIPRAELISQLNGRMQFTSPIVSEQNS 315
           +K  ++      KK+R  +RN G+ R E +   +G MQF SP ++ + S
Sbjct: 180 EKTEKARKSRKIKKRRSSRRNSGLLRGEQMLGNSGSMQFISPSINGRTS 228


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