BLASTX nr result

ID: Coptis24_contig00034441 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034441
         (351 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317602.1| predicted protein [Populus trichocarpa] gi|2...    80   2e-13
ref|XP_002300478.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12
ref|XP_002887425.1| hypothetical protein ARALYDRAFT_316194 [Arab...    69   5e-10
ref|NP_177370.1| Di-glucose binding protein with Kinesin motor d...    67   2e-09
ref|NP_001185378.1| Di-glucose binding protein with Kinesin moto...    67   2e-09

>ref|XP_002317602.1| predicted protein [Populus trichocarpa] gi|222860667|gb|EEE98214.1|
           predicted protein [Populus trichocarpa]
          Length = 1129

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 54/136 (39%), Positives = 70/136 (51%), Gaps = 23/136 (16%)
 Frame = -3

Query: 340 EERVPNGRSMLGFSLTSPDLVLCTGSPDIPNNG---NEEFRNSNVVGSIELSLDKGIDGR 170
           E+   +GRSMLGFSLTSPDLV+C GSPDI   G   + E  + N   SIELSL+ GIDG 
Sbjct: 22  EDDAIDGRSMLGFSLTSPDLVICAGSPDISRTGYGDSPELLDGNKC-SIELSLENGIDGS 80

Query: 169 DGE----------GGFYDALNNNVSPEASLDFSQVS----------LPIISINAGGSCKV 50
           D +             +   N  +SPE+S +               +P + INAG + + 
Sbjct: 81  DMKDSIKTPCVKFSSVFQTFNKELSPESSFELLPQQEKEEKLVKDFVPGVCINAGCTDRA 140

Query: 49  VPSTGVEFIEDSFFTG 2
           V   GVEF+ D  F G
Sbjct: 141 VVFGGVEFLGDDCFLG 156


>ref|XP_002300478.1| predicted protein [Populus trichocarpa] gi|222847736|gb|EEE85283.1|
           predicted protein [Populus trichocarpa]
          Length = 1083

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 52/131 (39%), Positives = 71/131 (54%), Gaps = 23/131 (17%)
 Frame = -3

Query: 325 NGRSMLGFSLTSPDLVLCTGSPDIPNNG---NEEFRNSNVVGSIELSLDKGIDG---RDG 164
           +GRS++GFSLTSPDLV+C  SPDI   G   + +F + N   SIE+SL+ GIDG   +D 
Sbjct: 4   SGRSVIGFSLTSPDLVICAASPDISRTGYGDSPDFMDKNKC-SIEVSLENGIDGSGIKDS 62

Query: 163 E-------GGFYDALNNNVSPEASLD----------FSQVSLPIISINAGGSCKVVPSTG 35
                      +   N  +SPE+S +            +V +P +SINAG +   V   G
Sbjct: 63  SKTPCVKFSPVFQTFNKELSPESSFELLPQTEKEEKLVKVFVPGVSINAGCTGGAVFLGG 122

Query: 34  VEFIEDSFFTG 2
           VEF+ED  F G
Sbjct: 123 VEFVEDDCFAG 133


>ref|XP_002887425.1| hypothetical protein ARALYDRAFT_316194 [Arabidopsis lyrata subsp.
           lyrata] gi|297333266|gb|EFH63684.1| hypothetical protein
           ARALYDRAFT_316194 [Arabidopsis lyrata subsp. lyrata]
          Length = 1211

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 48/129 (37%), Positives = 66/129 (51%), Gaps = 21/129 (16%)
 Frame = -3

Query: 325 NGRSMLGFSLTSPDLVLCTGSPDIPNNGNE---EFRNSNVVGSIELSLDKGIDG----RD 167
           +G+ +LGFSL SPDLV C  SPD+P    E   EF       S ELSL+ GIDG    R 
Sbjct: 72  DGKVVLGFSLASPDLVNCGASPDLPRGSYEDSPEFSKKRRF-STELSLENGIDGSTTTRH 130

Query: 166 GE-------GGFYDALNNNVSPEAS-------LDFSQVSLPIISINAGGSCKVVPSTGVE 29
           G                  +SPE+S       ++F + + P+ISIN+G +   V    V 
Sbjct: 131 GRKSQVVKFSAICQTFGYELSPESSFELPSPPVNFRESTTPVISINSGSTSTDVTVDDVT 190

Query: 28  FIEDSFFTG 2
           F++D+FF+G
Sbjct: 191 FLKDAFFSG 199


>ref|NP_177370.1| Di-glucose binding protein with Kinesin motor domain [Arabidopsis
           thaliana] gi|12323661|gb|AAG51794.1|AC067754_10 kinesin,
           putative; 56847-62063 [Arabidopsis thaliana]
           gi|332197172|gb|AEE35293.1| Di-glucose binding protein
           with Kinesin motor domain [Arabidopsis thaliana]
          Length = 1195

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 49/130 (37%), Positives = 65/130 (50%), Gaps = 22/130 (16%)
 Frame = -3

Query: 325 NGRSMLGFSLTSPDLVLCTGSPDIPNNGNE---EFRNSNVVGSIELSLDKGID------- 176
           +G+ +LGFSL SPDLV C  SPD+P    E   EF       S ELSL+ GID       
Sbjct: 71  DGKVVLGFSLASPDLVNCGASPDLPRGSYEDSPEFSKKRRF-STELSLENGIDGSTTTTR 129

Query: 175 -GRDGEGGFYDAL----NNNVSPEASL-------DFSQVSLPIISINAGGSCKVVPSTGV 32
            GR  +   + A+       +SPE+S        DF +   P+ISIN+G     V    V
Sbjct: 130 LGRKSQVVKFSAICQTFGYELSPESSFELPSPPGDFRESMTPVISINSGSISTDVTVEDV 189

Query: 31  EFIEDSFFTG 2
            F++D FF+G
Sbjct: 190 TFLKDEFFSG 199


>ref|NP_001185378.1| Di-glucose binding protein with Kinesin motor domain [Arabidopsis
           thaliana] gi|332197173|gb|AEE35294.1| Di-glucose binding
           protein with Kinesin motor domain [Arabidopsis thaliana]
          Length = 1203

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 49/130 (37%), Positives = 65/130 (50%), Gaps = 22/130 (16%)
 Frame = -3

Query: 325 NGRSMLGFSLTSPDLVLCTGSPDIPNNGNE---EFRNSNVVGSIELSLDKGID------- 176
           +G+ +LGFSL SPDLV C  SPD+P    E   EF       S ELSL+ GID       
Sbjct: 71  DGKVVLGFSLASPDLVNCGASPDLPRGSYEDSPEFSKKRRF-STELSLENGIDGSTTTTR 129

Query: 175 -GRDGEGGFYDAL----NNNVSPEASL-------DFSQVSLPIISINAGGSCKVVPSTGV 32
            GR  +   + A+       +SPE+S        DF +   P+ISIN+G     V    V
Sbjct: 130 LGRKSQVVKFSAICQTFGYELSPESSFELPSPPGDFRESMTPVISINSGSISTDVTVEDV 189

Query: 31  EFIEDSFFTG 2
            F++D FF+G
Sbjct: 190 TFLKDEFFSG 199


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