BLASTX nr result

ID: Coptis24_contig00034437 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034437
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309426.1| hypothetical protein POPTRDRAFT_561500 [Popu...    90   2e-16
ref|XP_003625833.1| hypothetical protein MTR_7g104720 [Medicago ...    89   5e-16
ref|XP_002276568.1| PREDICTED: uncharacterized protein At5g39865...    88   6e-16
ref|XP_002530319.1| conserved hypothetical protein [Ricinus comm...    87   1e-15
gb|AFK41682.1| unknown [Medicago truncatula]                           86   4e-15

>ref|XP_002309426.1| hypothetical protein POPTRDRAFT_561500 [Populus trichocarpa]
           gi|222855402|gb|EEE92949.1| hypothetical protein
           POPTRDRAFT_561500 [Populus trichocarpa]
          Length = 407

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 48/100 (48%), Positives = 63/100 (63%), Gaps = 2/100 (2%)
 Frame = -2

Query: 315 CPPGGKNSVIVYKTS-GGNKKAIEDFNEIVFKFHLEQIEFTVRDIYEDLRFRNELAKVLG 139
           CPPGG+N V++Y T+  G +K  ED N          I    RD+  D  F+ EL +++G
Sbjct: 256 CPPGGENKVVIYTTTLRGIRKTFEDCNTARSIIESHHIHIVERDVSMDSGFKEELRRLMG 315

Query: 138 KKDVKAPVVFVKGRLIGGLDEVEKLSYE-ELAILFHGIPK 22
            K+VK P+VFVKGRLIGG D+V KL  E +L ILF GIP+
Sbjct: 316 TKEVKVPLVFVKGRLIGGADQVVKLEEEGKLEILFDGIPR 355


>ref|XP_003625833.1| hypothetical protein MTR_7g104720 [Medicago truncatula]
           gi|355500848|gb|AES82051.1| hypothetical protein
           MTR_7g104720 [Medicago truncatula]
          Length = 405

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 46/100 (46%), Positives = 64/100 (64%), Gaps = 2/100 (2%)
 Frame = -2

Query: 315 CPPGGKNSVIVYKTS-GGNKKAIEDFNEIVFKFHLEQIEFTVRDIYEDLRFRNELAKVLG 139
           CPPGG+NSV++Y T+  G +K  ED N++        +    RD+  D  F+ EL K++G
Sbjct: 255 CPPGGENSVVIYTTTLRGIRKTFEDCNKVRSIIESYCVCLRERDVSMDSGFKEELRKLMG 314

Query: 138 KKDVKAPVVFVKGRLIGGLDEVEKLSYEE-LAILFHGIPK 22
            K V+ PVVFVKGR +GG+DE+ KL  EE L +L  GIP+
Sbjct: 315 MKQVQVPVVFVKGRFVGGVDEIMKLEDEEKLGVLLEGIPR 354


>ref|XP_002276568.1| PREDICTED: uncharacterized protein At5g39865-like [Vitis vinifera]
          Length = 398

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 49/100 (49%), Positives = 62/100 (62%), Gaps = 2/100 (2%)
 Frame = -2

Query: 315 CPPGGKNSVIVYKTS-GGNKKAIEDFNEIVFKFHLEQIEFTVRDIYEDLRFRNELAKVLG 139
           CPPGG N+V++Y T+  G +K  ED N +        I    RDI  D   + EL  ++G
Sbjct: 248 CPPGGANAVVIYTTTLRGIRKTFEDCNHVRSILESHHIHMFERDISMDSGLKEELRGLMG 307

Query: 138 KKDVKAPVVFVKGRLIGGLDEVEKLSYE-ELAILFHGIPK 22
            K+VK P+VFVKGRLIGG DEV KL  E +L ILF GIP+
Sbjct: 308 TKEVKVPLVFVKGRLIGGADEVVKLEEEGKLDILFDGIPR 347


>ref|XP_002530319.1| conserved hypothetical protein [Ricinus communis]
           gi|223530123|gb|EEF32035.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 427

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 48/100 (48%), Positives = 63/100 (63%), Gaps = 2/100 (2%)
 Frame = -2

Query: 315 CPPGGKNSVIVYKTS-GGNKKAIEDFNEIVFKFHLEQIEFTVRDIYEDLRFRNELAKVLG 139
           CPPGG+N+V++Y T+  G +K  ED N +        I    RDI  D   + EL +++G
Sbjct: 276 CPPGGENAVVLYTTTLRGIRKTFEDCNTVRSIIESHHIHMLERDISMDSGLKEELRRLMG 335

Query: 138 KKDVKAPVVFVKGRLIGGLDEVEKLSYE-ELAILFHGIPK 22
            K VK P+VFVKGRLIGG D+V KL  E +L ILF GIP+
Sbjct: 336 TKVVKVPLVFVKGRLIGGADQVVKLEEEGKLGILFDGIPR 375


>gb|AFK41682.1| unknown [Medicago truncatula]
          Length = 405

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 45/100 (45%), Positives = 63/100 (63%), Gaps = 2/100 (2%)
 Frame = -2

Query: 315 CPPGGKNSVIVYKTS-GGNKKAIEDFNEIVFKFHLEQIEFTVRDIYEDLRFRNELAKVLG 139
           CPP G+NSV++Y T+  G +K  ED N++        +    RD+  D  F+ EL K++G
Sbjct: 255 CPPEGENSVVIYTTTLRGIRKTFEDCNKVRSIIESYCVCLRERDVSMDSGFKEELRKLMG 314

Query: 138 KKDVKAPVVFVKGRLIGGLDEVEKLSYEE-LAILFHGIPK 22
            K V+ PVVFVKGR +GG+DE+ KL  EE L +L  GIP+
Sbjct: 315 MKQVQVPVVFVKGRFVGGVDEIMKLEDEEKLGVLLEGIPR 354


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