BLASTX nr result

ID: Coptis24_contig00034400 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034400
         (325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18349.3| unnamed protein product [Vitis vinifera]              177   6e-43
ref|XP_002267070.1| PREDICTED: uncharacterized protein LOC100245...   177   6e-43
emb|CAN74345.1| hypothetical protein VITISV_005477 [Vitis vinifera]   177   6e-43
ref|XP_002509825.1| nucleoside-triphosphatase, putative [Ricinus...   174   5e-42
ref|XP_002303599.1| tir-nbs resistance protein [Populus trichoca...   173   1e-41

>emb|CBI18349.3| unnamed protein product [Vitis vinifera]
          Length = 1001

 Score =  177 bits (450), Expect = 6e-43
 Identities = 88/108 (81%), Positives = 92/108 (85%)
 Frame = -2

Query: 324 DALAAIEEKLGRLTLGFGIVGAILSELPINPTRLLDTVNRMPLRDFIWSSKEAPTLRQNT 145
           DAL  IEEKLGRLTLG  IVGAILSELPINP+RLLDT+NRMPLRD  WS +E   LR+NT
Sbjct: 634 DALRVIEEKLGRLTLGLAIVGAILSELPINPSRLLDTINRMPLRDLTWSGREGHLLRRNT 693

Query: 144 FLLQLLEVCFSIFDHADGPRSLATRMAQVSGWFGPGAIPISLLALAAN 1
           FL QL EVCFSIFDHADGPRSLATRM QVSGWF P AIPI LLALAAN
Sbjct: 694 FLFQLFEVCFSIFDHADGPRSLATRMVQVSGWFAPSAIPIFLLALAAN 741


>ref|XP_002267070.1| PREDICTED: uncharacterized protein LOC100245966 [Vitis vinifera]
          Length = 1009

 Score =  177 bits (450), Expect = 6e-43
 Identities = 88/108 (81%), Positives = 92/108 (85%)
 Frame = -2

Query: 324 DALAAIEEKLGRLTLGFGIVGAILSELPINPTRLLDTVNRMPLRDFIWSSKEAPTLRQNT 145
           DAL  IEEKLGRLTLG  IVGAILSELPINP+RLLDT+NRMPLRD  WS +E   LR+NT
Sbjct: 642 DALRVIEEKLGRLTLGLAIVGAILSELPINPSRLLDTINRMPLRDLTWSGREGHLLRRNT 701

Query: 144 FLLQLLEVCFSIFDHADGPRSLATRMAQVSGWFGPGAIPISLLALAAN 1
           FL QL EVCFSIFDHADGPRSLATRM QVSGWF P AIPI LLALAAN
Sbjct: 702 FLFQLFEVCFSIFDHADGPRSLATRMVQVSGWFAPSAIPIFLLALAAN 749


>emb|CAN74345.1| hypothetical protein VITISV_005477 [Vitis vinifera]
          Length = 1011

 Score =  177 bits (450), Expect = 6e-43
 Identities = 88/108 (81%), Positives = 92/108 (85%)
 Frame = -2

Query: 324 DALAAIEEKLGRLTLGFGIVGAILSELPINPTRLLDTVNRMPLRDFIWSSKEAPTLRQNT 145
           DAL  IEEKLGRLTLG  IVGAILSELPINP+RLLDT+NRMPLRD  WS +E   LR+NT
Sbjct: 644 DALRVIEEKLGRLTLGLAIVGAILSELPINPSRLLDTINRMPLRDLTWSGREGHLLRRNT 703

Query: 144 FLLQLLEVCFSIFDHADGPRSLATRMAQVSGWFGPGAIPISLLALAAN 1
           FL QL EVCFSIFDHADGPRSLATRM QVSGWF P AIPI LLALAAN
Sbjct: 704 FLFQLFEVCFSIFDHADGPRSLATRMVQVSGWFAPSAIPIFLLALAAN 751


>ref|XP_002509825.1| nucleoside-triphosphatase, putative [Ricinus communis]
           gi|223549724|gb|EEF51212.1| nucleoside-triphosphatase,
           putative [Ricinus communis]
          Length = 999

 Score =  174 bits (442), Expect = 5e-42
 Identities = 85/108 (78%), Positives = 94/108 (87%)
 Frame = -2

Query: 324 DALAAIEEKLGRLTLGFGIVGAILSELPINPTRLLDTVNRMPLRDFIWSSKEAPTLRQNT 145
           +AL  IEEKLGRLTLG  IVGAILSELPINP+RLLDT+NRMPLR+  WS +EA +L +N+
Sbjct: 632 EALRVIEEKLGRLTLGLAIVGAILSELPINPSRLLDTINRMPLREISWSGREANSLTKNS 691

Query: 144 FLLQLLEVCFSIFDHADGPRSLATRMAQVSGWFGPGAIPISLLALAAN 1
           FLLQL EVCFSIFDHADGPRSLATRM Q SGWF P AIP+SLLALAAN
Sbjct: 692 FLLQLFEVCFSIFDHADGPRSLATRMVQASGWFAPAAIPVSLLALAAN 739


>ref|XP_002303599.1| tir-nbs resistance protein [Populus trichocarpa]
           gi|222841031|gb|EEE78578.1| tir-nbs resistance protein
           [Populus trichocarpa]
          Length = 1005

 Score =  173 bits (439), Expect = 1e-41
 Identities = 84/107 (78%), Positives = 93/107 (86%)
 Frame = -2

Query: 324 DALAAIEEKLGRLTLGFGIVGAILSELPINPTRLLDTVNRMPLRDFIWSSKEAPTLRQNT 145
           DAL  IEEK+GRLTLG  IVGAILSELPINP+RLLDT+NRMPLR+  WS +EA ++R+NT
Sbjct: 638 DALRVIEEKVGRLTLGLAIVGAILSELPINPSRLLDTINRMPLREMSWSGREAHSMRKNT 697

Query: 144 FLLQLLEVCFSIFDHADGPRSLATRMAQVSGWFGPGAIPISLLALAA 4
           FLLQL EVCFSIFDHADGPRSLATRM Q S WF P AIP+SLLALAA
Sbjct: 698 FLLQLFEVCFSIFDHADGPRSLATRMVQASAWFAPAAIPVSLLALAA 744


Top