BLASTX nr result

ID: Coptis24_contig00034385 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034385
         (416 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311566.1| predicted protein [Populus trichocarpa] gi|2...   126   2e-27
ref|XP_002518800.1| conserved hypothetical protein [Ricinus comm...   122   3e-26
ref|XP_003631315.1| PREDICTED: uncharacterized protein LOC100265...   118   6e-25
emb|CBI27489.3| unnamed protein product [Vitis vinifera]              118   6e-25
ref|XP_004140446.1| PREDICTED: uncharacterized protein LOC101212...   114   6e-24

>ref|XP_002311566.1| predicted protein [Populus trichocarpa] gi|222851386|gb|EEE88933.1|
            predicted protein [Populus trichocarpa]
          Length = 1950

 Score =  126 bits (316), Expect = 2e-27
 Identities = 67/141 (47%), Positives = 92/141 (65%), Gaps = 3/141 (2%)
 Frame = -2

Query: 415  YFLSSEGLSGVHRDTCVDFPIRDE-KSENALVTEG--TTLRQLFVTVSPKLCAAIKNHIT 245
            Y+ +++G     +D+     + D+ KS    V +   T LRQLFVTVSPKLC AIK+H+ 
Sbjct: 964  YYTATQGYLNTSKDSSRRNNVADDIKSVGDGVGDAKETVLRQLFVTVSPKLCYAIKHHVI 1023

Query: 244  NLMRFSCGSNSKAECNTIDMHDIEDTSQLTGIPESFVDIIPKTYPLVVTFQKFLLMLDRS 65
             L  F+ G    AE +++DM DI+D +Q   IP SF+DI PK+YPLV+TF KFL+MLD +
Sbjct: 1024 QLKSFASGGKYSAEGSSVDMEDIDDAAQFKEIPNSFLDIPPKSYPLVITFFKFLMMLDGT 1083

Query: 64   MENSYFDRFLDLRDFLHGSNG 2
            + NSYF+RF D+R  LH   G
Sbjct: 1084 VGNSYFERFSDMRQLLHEKVG 1104


>ref|XP_002518800.1| conserved hypothetical protein [Ricinus communis]
            gi|223542181|gb|EEF43725.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 2820

 Score =  122 bits (306), Expect = 3e-26
 Identities = 62/145 (42%), Positives = 89/145 (61%), Gaps = 7/145 (4%)
 Frame = -2

Query: 415  YFLSSEGLSGVHRDTCVDFPIRDEKSENALVTEGT-------TLRQLFVTVSPKLCAAIK 257
            Y ++ EG    +  T  +  ++D K +     E +        L QLFVTVSPKLC A+K
Sbjct: 1134 YHMAMEGYDDENGKTSKEIFLKDRKVDETKTAESSIGGAKNAVLHQLFVTVSPKLCYAVK 1193

Query: 256  NHITNLMRFSCGSNSKAECNTIDMHDIEDTSQLTGIPESFVDIIPKTYPLVVTFQKFLLM 77
            + ++ L RF+ G       ++IDM DI+DT+Q   IP+S +DI P+++PLV+TF KFL+M
Sbjct: 1194 HQVSQLKRFASGGKCFVGSSSIDMEDIDDTAQFKDIPDSLIDIPPESFPLVITFFKFLMM 1253

Query: 76   LDRSMENSYFDRFLDLRDFLHGSNG 2
            LD ++ NSYF+RF D R  LHG  G
Sbjct: 1254 LDGTIGNSYFERFPDARQLLHGKIG 1278


>ref|XP_003631315.1| PREDICTED: uncharacterized protein LOC100265010 [Vitis vinifera]
          Length = 2792

 Score =  118 bits (295), Expect = 6e-25
 Identities = 60/135 (44%), Positives = 84/135 (62%)
 Frame = -2

Query: 409  LSSEGLSGVHRDTCVDFPIRDEKSENALVTEGTTLRQLFVTVSPKLCAAIKNHITNLMRF 230
            ++ EG  G   +   +   R E   +   T+   LRQLFVTVSPKLC A+K H+++L  F
Sbjct: 1114 MAMEGFQGDKGNASTNATYRKEVGVSVGETQVAVLRQLFVTVSPKLCYAVKQHVSHLKSF 1173

Query: 229  SCGSNSKAECNTIDMHDIEDTSQLTGIPESFVDIIPKTYPLVVTFQKFLLMLDRSMENSY 50
            + G N  AE ++ +   ++D      I +S VDI PK+YPLVVTF KFL+MLD ++ NSY
Sbjct: 1174 AHGKNFSAEESSNNKDYVDDAELFDDIQDSLVDIPPKSYPLVVTFHKFLMMLDETLSNSY 1233

Query: 49   FDRFLDLRDFLHGSN 5
            FDRF D+R+  HG +
Sbjct: 1234 FDRFHDVRELSHGKS 1248


>emb|CBI27489.3| unnamed protein product [Vitis vinifera]
          Length = 2562

 Score =  118 bits (295), Expect = 6e-25
 Identities = 60/134 (44%), Positives = 86/134 (64%), Gaps = 3/134 (2%)
 Frame = -2

Query: 397  GLSGVHRDTCVDFPIRDEKSENALVTEGT---TLRQLFVTVSPKLCAAIKNHITNLMRFS 227
            G SG  + T +   +  ++ ++ +  E T    LRQLFVTVSPKLC A+K H+++L  F+
Sbjct: 1053 GRSGTGKTTVLTMKLFQKEQQHRMAMEETQVAVLRQLFVTVSPKLCYAVKQHVSHLKSFA 1112

Query: 226  CGSNSKAECNTIDMHDIEDTSQLTGIPESFVDIIPKTYPLVVTFQKFLLMLDRSMENSYF 47
             G N  AE ++ +   ++D      I +S VDI PK+YPLVVTF KFL+MLD ++ NSYF
Sbjct: 1113 HGKNFSAEESSNNKDYVDDAELFDDIQDSLVDIPPKSYPLVVTFHKFLMMLDETLSNSYF 1172

Query: 46   DRFLDLRDFLHGSN 5
            DRF D+R+  HG +
Sbjct: 1173 DRFHDVRELSHGKS 1186


>ref|XP_004140446.1| PREDICTED: uncharacterized protein LOC101212468 [Cucumis sativus]
          Length = 2710

 Score =  114 bits (286), Expect = 6e-24
 Identities = 55/117 (47%), Positives = 79/117 (67%), Gaps = 1/117 (0%)
 Frame = -2

Query: 352  RDEKSENALVTEGTTLRQLFVTVSPKLCAAIKNHITNLMRFSCGSNSKAECNTIDMHDIE 173
            + E SE      G  LRQLF+TVSPKLC A++ H+++L  ++CG ++K      DM +++
Sbjct: 1068 KSEISEIPAAENGAVLRQLFLTVSPKLCYAVRQHVSHLKSYACGGDTK-RTTAFDMENMD 1126

Query: 172  DT-SQLTGIPESFVDIIPKTYPLVVTFQKFLLMLDRSMENSYFDRFLDLRDFLHGSN 5
            D  +Q T +P+S  +I  K+YPLV+TF KFL+MLDR++ NSYF RF D R  L+G N
Sbjct: 1127 DLEAQFTDVPDSLANITTKSYPLVITFYKFLMMLDRTLCNSYFQRFCDARQLLYGQN 1183


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