BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034379
         (410 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK34929.1| unknown [Lotus japonicus] gi|388511333|gb|AFK4372...    46   4e-09
ref|XP_004155213.1| PREDICTED: cytochrome c oxidase subunit 6a, ...    42   2e-08
ref|XP_002531993.1| cytochrome-c oxidase, putative [Ricinus comm...    41   1e-07
ref|XP_002866930.1| hypothetical protein ARALYDRAFT_912546 [Arab...    40   3e-07
ref|NP_195496.1| cytochrome c oxidase subunit VIa [Arabidopsis t...    40   1e-06

>gb|AFK34929.1| unknown [Lotus japonicus] gi|388511333|gb|AFK43728.1| unknown
           [Lotus japonicus]
          Length = 102

 Score = 45.8 bits (107), Expect(2) = 4e-09
 Identities = 18/22 (81%), Positives = 20/22 (90%)
 Frame = -2

Query: 409 ASCTALAVYCLSKPHPHHEDPP 344
           ASCTALA YCLSK HPH+E+PP
Sbjct: 54  ASCTALAAYCLSKGHPHYEEPP 75



 Score = 40.0 bits (92), Expect(2) = 4e-09
 Identities = 15/15 (100%), Positives = 15/15 (100%)
 Frame = -1

Query: 272 AYPYLHIRNKEFPWG 228
           AYPYLHIRNKEFPWG
Sbjct: 76  AYPYLHIRNKEFPWG 90


>ref|XP_004155213.1| PREDICTED: cytochrome c oxidase subunit 6a, mitochondrial-like
           isoform 1 [Cucumis sativus]
          Length = 141

 Score = 42.4 bits (98), Expect(2) = 2e-08
 Identities = 16/20 (80%), Positives = 18/20 (90%)
 Frame = -1

Query: 287 FLYLQAYPYLHIRNKEFPWG 228
           F  +QAYPY+HIRNKEFPWG
Sbjct: 112 FHCMQAYPYMHIRNKEFPWG 131



 Score = 41.2 bits (95), Expect(2) = 2e-08
 Identities = 16/24 (66%), Positives = 20/24 (83%)
 Frame = -2

Query: 406 SCTALAVYCLSKPHPHHEDPPVSF 335
           +C+ LA Y LSK HPHHE+PPVS+
Sbjct: 53  TCSILAFYNLSKGHPHHEEPPVSY 76


>ref|XP_002531993.1| cytochrome-c oxidase, putative [Ricinus communis]
           gi|223528352|gb|EEF30392.1| cytochrome-c oxidase,
           putative [Ricinus communis]
          Length = 101

 Score = 41.2 bits (95), Expect(2) = 1e-07
 Identities = 16/22 (72%), Positives = 19/22 (86%)
 Frame = -2

Query: 409 ASCTALAVYCLSKPHPHHEDPP 344
           ASC+ LA+Y LSK HPHHE+PP
Sbjct: 55  ASCSILAIYNLSKGHPHHEEPP 76



 Score = 39.3 bits (90), Expect(2) = 1e-07
 Identities = 14/15 (93%), Positives = 15/15 (100%)
 Frame = -1

Query: 272 AYPYLHIRNKEFPWG 228
           AYPY+HIRNKEFPWG
Sbjct: 77  AYPYMHIRNKEFPWG 91


>ref|XP_002866930.1| hypothetical protein ARALYDRAFT_912546 [Arabidopsis lyrata subsp.
           lyrata] gi|297312766|gb|EFH43189.1| hypothetical protein
           ARALYDRAFT_912546 [Arabidopsis lyrata subsp. lyrata]
          Length = 102

 Score = 40.0 bits (92), Expect(2) = 3e-07
 Identities = 18/22 (81%), Positives = 18/22 (81%)
 Frame = -2

Query: 409 ASCTALAVYCLSKPHPHHEDPP 344
           ASCTALAVY LSK H H EDPP
Sbjct: 53  ASCTALAVYVLSKGHHHGEDPP 74



 Score = 39.3 bits (90), Expect(2) = 3e-07
 Identities = 14/15 (93%), Positives = 15/15 (100%)
 Frame = -1

Query: 272 AYPYLHIRNKEFPWG 228
           AYPY+HIRNKEFPWG
Sbjct: 75  AYPYMHIRNKEFPWG 89


>ref|NP_195496.1| cytochrome c oxidase subunit VIa [Arabidopsis thaliana]
           gi|75213718|sp|Q9T070.1|COX6A_ARATH RecName:
           Full=Cytochrome c oxidase subunit 6a, mitochondrial;
           Short=AtCOX6a; Flags: Precursor
           gi|11908090|gb|AAG41474.1|AF326892_1 unknown protein
           [Arabidopsis thaliana]
           gi|12642898|gb|AAK00391.1|AF339709_1 unknown protein
           [Arabidopsis thaliana]
           gi|14190491|gb|AAK55726.1|AF380645_1
           AT4g37830/T28I19_110 [Arabidopsis thaliana]
           gi|4490728|emb|CAB38931.1| putative protein [Arabidopsis
           thaliana] gi|7270766|emb|CAB80448.1| putative protein
           [Arabidopsis thaliana] gi|15810105|gb|AAL06978.1|
           AT4g37830/T28I19_110 [Arabidopsis thaliana]
           gi|110737597|dbj|BAF00740.1| hypothetical protein
           [Arabidopsis thaliana] gi|332661442|gb|AEE86842.1|
           cytochrome c oxidase subunit VIa [Arabidopsis thaliana]
          Length = 102

 Score = 40.0 bits (92), Expect(2) = 1e-06
 Identities = 18/22 (81%), Positives = 18/22 (81%)
 Frame = -2

Query: 409 ASCTALAVYCLSKPHPHHEDPP 344
           ASCTALAVY LSK H H EDPP
Sbjct: 53  ASCTALAVYVLSKGHHHGEDPP 74



 Score = 37.4 bits (85), Expect(2) = 1e-06
 Identities = 13/15 (86%), Positives = 15/15 (100%)
 Frame = -1

Query: 272 AYPYLHIRNKEFPWG 228
           AYP++HIRNKEFPWG
Sbjct: 75  AYPHMHIRNKEFPWG 89