BLASTX nr result

ID: Coptis24_contig00034340 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034340
         (328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277965.1| PREDICTED: uncharacterized protein LOC100257...   107   1e-21
ref|XP_002525638.1| conserved hypothetical protein [Ricinus comm...   104   9e-21
ref|XP_002864587.1| hypothetical protein ARALYDRAFT_496000 [Arab...   102   3e-20
ref|XP_002313382.1| predicted protein [Populus trichocarpa] gi|2...   100   2e-19
ref|NP_200683.1| WcaG domain-containing protein [Arabidopsis tha...   100   2e-19

>ref|XP_002277965.1| PREDICTED: uncharacterized protein LOC100257108 [Vitis vinifera]
          Length = 374

 Score =  107 bits (266), Expect = 1e-21
 Identities = 48/70 (68%), Positives = 57/70 (81%)
 Frame = -3

Query: 320 WEEIVTKEGLCQTKIEDLANWAFLDTLFRCPAKMLANRDKANRHGFTTTYQTVDSILYWI 141
           W+EIV K GL QT++ DLANWAF+D LFRCP KML  RDKA+  GFT  YQT+DSILYWI
Sbjct: 305 WKEIVLKAGLLQTEMRDLANWAFMDMLFRCPVKMLGTRDKADGLGFTVRYQTLDSILYWI 364

Query: 140 AYMREERLIP 111
            +MR+E+LIP
Sbjct: 365 DFMRKEKLIP 374


>ref|XP_002525638.1| conserved hypothetical protein [Ricinus communis]
           gi|223535074|gb|EEF36756.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 379

 Score =  104 bits (259), Expect = 9e-21
 Identities = 46/72 (63%), Positives = 60/72 (83%)
 Frame = -3

Query: 326 DAWEEIVTKEGLCQTKIEDLANWAFLDTLFRCPAKMLANRDKANRHGFTTTYQTVDSILY 147
           D W+EIV KEGL QT++EDLANW FLD LFRCP+KML +R+K++R GFT   +T+DS+LY
Sbjct: 308 DVWKEIVEKEGLLQTEMEDLANWEFLDALFRCPSKMLGSREKSDRLGFTMRCKTMDSMLY 367

Query: 146 WIAYMREERLIP 111
           WI  MR+++LIP
Sbjct: 368 WIDSMRDDKLIP 379


>ref|XP_002864587.1| hypothetical protein ARALYDRAFT_496000 [Arabidopsis lyrata subsp.
           lyrata] gi|297310422|gb|EFH40846.1| hypothetical protein
           ARALYDRAFT_496000 [Arabidopsis lyrata subsp. lyrata]
          Length = 386

 Score =  102 bits (254), Expect = 3e-20
 Identities = 46/70 (65%), Positives = 55/70 (78%)
 Frame = -3

Query: 320 WEEIVTKEGLCQTKIEDLANWAFLDTLFRCPAKMLANRDKANRHGFTTTYQTVDSILYWI 141
           W+EIV KE L QTKIEDLANW FLD LFRCP K+L  R+K ++ GF   Y+T+DSILYWI
Sbjct: 316 WDEIVVKEKLVQTKIEDLANWFFLDALFRCPFKLLGKREKVDKFGFKRKYRTLDSILYWI 375

Query: 140 AYMREERLIP 111
             MR+E+LIP
Sbjct: 376 DVMRDEKLIP 385


>ref|XP_002313382.1| predicted protein [Populus trichocarpa] gi|222849790|gb|EEE87337.1|
           predicted protein [Populus trichocarpa]
          Length = 378

 Score =  100 bits (248), Expect = 2e-19
 Identities = 45/72 (62%), Positives = 57/72 (79%)
 Frame = -3

Query: 326 DAWEEIVTKEGLCQTKIEDLANWAFLDTLFRCPAKMLANRDKANRHGFTTTYQTVDSILY 147
           +AW+EIV KEGL  T++EDLANW FLD LFR P KML  R KA+R GFT   +T++SILY
Sbjct: 307 EAWQEIVVKEGLVHTEMEDLANWEFLDILFRFPMKMLGTRGKADRLGFTMRCKTLESILY 366

Query: 146 WIAYMREERLIP 111
           W+ +MREE++IP
Sbjct: 367 WVDFMREEKMIP 378


>ref|NP_200683.1| WcaG domain-containing protein [Arabidopsis thaliana]
           gi|8843795|dbj|BAA97343.1| induced upon wounding
           stress-like protein [Arabidopsis thaliana]
           gi|119360131|gb|ABL66794.1| At5g58750 [Arabidopsis
           thaliana] gi|332009711|gb|AED97094.1| WcaG
           domain-containing protein [Arabidopsis thaliana]
          Length = 386

 Score =  100 bits (248), Expect = 2e-19
 Identities = 44/70 (62%), Positives = 55/70 (78%)
 Frame = -3

Query: 320 WEEIVTKEGLCQTKIEDLANWAFLDTLFRCPAKMLANRDKANRHGFTTTYQTVDSILYWI 141
           W+EIV KE L +T+IEDLANW FLD LFRCP K+L  R+K +R GF   Y+T+DS+LYWI
Sbjct: 316 WDEIVVKEKLVRTEIEDLANWYFLDALFRCPFKLLGKREKVDRFGFKRKYRTLDSVLYWI 375

Query: 140 AYMREERLIP 111
             MR+E+LIP
Sbjct: 376 DVMRDEKLIP 385


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