BLASTX nr result

ID: Coptis24_contig00034328 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034328
         (392 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAS57718.2| transcriptional factor leafy [Eriobotrya japonica]      87   1e-15
gb|AAO73539.1| leafy/floricaula [Salix discolor]                       87   1e-15
dbj|BAD10954.1| LEAFY protein [Eriobotrya japonica]                    87   1e-15
gb|AEK26560.1| leafy protein [Populus tremula] gi|340007713|gb|A...    87   2e-15
ref|XP_002322307.1| predicted protein [Populus trichocarpa] gi|7...    86   2e-15

>gb|AAS57718.2| transcriptional factor leafy [Eriobotrya japonica]
          Length = 408

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 51/108 (47%), Positives = 64/108 (59%), Gaps = 1/108 (0%)
 Frame = +1

Query: 67  NSYKWETRATASAPLLQNRIFEEMGATTLXXXXXXXXXXXXXXDQHIG-RGLEELFQRYR 243
           N +KW+ R      +  NR+  E                     + +G RGLE+LFQ Y 
Sbjct: 9   NLFKWDLRGMV---VPTNRVQLEAAVPPAAAAAAGAAGYTLRPPRELGLRGLEDLFQAYG 65

Query: 244 VRYSTVAKIAELGFTVNTLLGMTDDEIDEMLVTNLSQIFHWDLHVGER 387
           VRY T AKIAELGFTVNTLL M DDE+D+M+ ++LSQIF W+L VGER
Sbjct: 66  VRYYTAAKIAELGFTVNTLLDMKDDELDDMM-SSLSQIFRWELFVGER 112


>gb|AAO73539.1| leafy/floricaula [Salix discolor]
          Length = 375

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 52/105 (49%), Positives = 61/105 (58%)
 Frame = +1

Query: 73  YKWETRATASAPLLQNRIFEEMGATTLXXXXXXXXXXXXXXDQHIGRGLEELFQRYRVRY 252
           +KW+TRA    P   NR+ E +                         GLEELFQ Y +RY
Sbjct: 11  FKWDTRAMVPHP---NRLLEMVAPPQQPPAAAFAVRPRELC------GLEELFQAYGIRY 61

Query: 253 STVAKIAELGFTVNTLLGMTDDEIDEMLVTNLSQIFHWDLHVGER 387
            T AKIAELGFTVNTLL M D+E+DEM+  +LSQIF WDL VGER
Sbjct: 62  YTAAKIAELGFTVNTLLDMKDEELDEMM-NSLSQIFRWDLLVGER 105


>dbj|BAD10954.1| LEAFY protein [Eriobotrya japonica]
          Length = 408

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 51/108 (47%), Positives = 64/108 (59%), Gaps = 1/108 (0%)
 Frame = +1

Query: 67  NSYKWETRATASAPLLQNRIFEEMGATTLXXXXXXXXXXXXXXDQHIG-RGLEELFQRYR 243
           N +KW+ R      +  NR+  E                     + +G RGLE+LFQ Y 
Sbjct: 9   NLFKWDLRGMV---VPTNRVQLEAAVPPAAAAAAGAAGYTLRPPRELGLRGLEDLFQAYG 65

Query: 244 VRYSTVAKIAELGFTVNTLLGMTDDEIDEMLVTNLSQIFHWDLHVGER 387
           VRY T AKIAELGFTVNTLL M DDE+D+M+ ++LSQIF W+L VGER
Sbjct: 66  VRYYTAAKIAELGFTVNTLLDMKDDELDDMM-SSLSQIFRWELFVGER 112


>gb|AEK26560.1| leafy protein [Populus tremula] gi|340007713|gb|AEK26562.1| leafy
           protein [Populus tremula]
          Length = 377

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 52/105 (49%), Positives = 61/105 (58%)
 Frame = +1

Query: 73  YKWETRATASAPLLQNRIFEEMGATTLXXXXXXXXXXXXXXDQHIGRGLEELFQRYRVRY 252
           +KW+TRA    P   NR+ E +                         GLEELFQ Y +RY
Sbjct: 11  FKWDTRAMVPHP---NRLLEXVPPPQQPPAAAFAVRPRELC------GLEELFQAYGIRY 61

Query: 253 STVAKIAELGFTVNTLLGMTDDEIDEMLVTNLSQIFHWDLHVGER 387
            T AKIAELGFTVNTLL M D+E+DEM+  +LSQIF WDL VGER
Sbjct: 62  YTAAKIAELGFTVNTLLDMKDEELDEMM-NSLSQIFRWDLLVGER 105


>ref|XP_002322307.1| predicted protein [Populus trichocarpa]
           gi|7227895|sp|O04064.1|FLLH_POPTR RecName:
           Full=Floricaula/leafy homolog; AltName: Full=PTLF
           gi|1930094|gb|AAB51533.1| FLORICAULA/LEAFY homolog
           [Populus trichocarpa] gi|222869303|gb|EEF06434.1|
           predicted protein [Populus trichocarpa]
          Length = 377

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 52/105 (49%), Positives = 61/105 (58%)
 Frame = +1

Query: 73  YKWETRATASAPLLQNRIFEEMGATTLXXXXXXXXXXXXXXDQHIGRGLEELFQRYRVRY 252
           +KW+TRA    P   NR+ E +                         GLEELFQ Y +RY
Sbjct: 11  FKWDTRAMVPHP---NRLLEMVPPPQQPPAAAFAVRPRELC------GLEELFQAYGIRY 61

Query: 253 STVAKIAELGFTVNTLLGMTDDEIDEMLVTNLSQIFHWDLHVGER 387
            T AKIAELGFTVNTLL M D+E+DEM+  +LSQIF WDL VGER
Sbjct: 62  YTAAKIAELGFTVNTLLDMKDEELDEMM-NSLSQIFRWDLLVGER 105


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