BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034321
         (609 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281077.1| PREDICTED: cytochrome c biogenesis protein C...   217   1e-54
ref|XP_003537900.1| PREDICTED: cytochrome c biogenesis protein C...   209   4e-52
ref|XP_004162745.1| PREDICTED: cytochrome c biogenesis protein C...   207   2e-51
ref|XP_004137133.1| PREDICTED: cytochrome c biogenesis protein C...   207   2e-51
ref|XP_002313066.1| predicted protein [Populus trichocarpa] gi|2...   204   8e-51

>ref|XP_002281077.1| PREDICTED: cytochrome c biogenesis protein CCS1, chloroplastic
           [Vitis vinifera] gi|297741415|emb|CBI32546.3| unnamed
           protein product [Vitis vinifera]
          Length = 557

 Score =  217 bits (552), Expect = 1e-54
 Identities = 105/130 (80%), Positives = 119/130 (91%)
 Frame = +1

Query: 1   MLARDLQSIVLYDQEGKFVGVRRPDSNLPVDIGGTKIVIVDAIGSSGLDLKIDPGVPIVY 180
           MLARDLQSIVLYD+EGKF GVRRP+SNLP+DI GT+IVI DAIGSSGLDLK DPGVPIVY
Sbjct: 428 MLARDLQSIVLYDKEGKFAGVRRPNSNLPIDIDGTRIVIEDAIGSSGLDLKTDPGVPIVY 487

Query: 181 AGFGALMLTTCISYLSHSQVWALQDGTTVVIGGKTNRAKIEFPNEMNRLLDLVPEIINSS 360
           AGFGALMLTTCISYLSH+Q+WALQDGTTVVIGGKTNRAK+EFP+EMN+LLD VPE++ SS
Sbjct: 488 AGFGALMLTTCISYLSHTQIWALQDGTTVVIGGKTNRAKLEFPDEMNQLLDRVPELVESS 547

Query: 361 PPETSEILDG 390
             + S+ + G
Sbjct: 548 LSKQSDAISG 557


>ref|XP_003537900.1| PREDICTED: cytochrome c biogenesis protein CCS1, chloroplastic-like
           [Glycine max]
          Length = 563

 Score =  209 bits (531), Expect = 4e-52
 Identities = 99/130 (76%), Positives = 118/130 (90%)
 Frame = +1

Query: 1   MLARDLQSIVLYDQEGKFVGVRRPDSNLPVDIGGTKIVIVDAIGSSGLDLKIDPGVPIVY 180
           MLARDLQSIVLYD+EGKF GVRRP+S LP++I G++IVIVDAIGSSGL+LK DPGVP+VY
Sbjct: 434 MLARDLQSIVLYDKEGKFAGVRRPNSKLPINIDGSEIVIVDAIGSSGLELKTDPGVPVVY 493

Query: 181 AGFGALMLTTCISYLSHSQVWALQDGTTVVIGGKTNRAKIEFPNEMNRLLDLVPEIINSS 360
           AGFGALM+TTCISYLSHSQ+WALQDGTTV +GGKTNRAK+EFP EM+RLLD VPEI+ S+
Sbjct: 494 AGFGALMITTCISYLSHSQIWALQDGTTVFVGGKTNRAKMEFPEEMSRLLDKVPEIVESN 553

Query: 361 PPETSEILDG 390
            P+ ++ + G
Sbjct: 554 LPKHADSISG 563


>ref|XP_004162745.1| PREDICTED: cytochrome c biogenesis protein CCS1, chloroplastic-like
           [Cucumis sativus]
          Length = 560

 Score =  207 bits (526), Expect = 2e-51
 Identities = 100/120 (83%), Positives = 109/120 (90%)
 Frame = +1

Query: 1   MLARDLQSIVLYDQEGKFVGVRRPDSNLPVDIGGTKIVIVDAIGSSGLDLKIDPGVPIVY 180
           MLARDLQSIVLYDQEGKFVGVRRP S LP+DI G KI IVDAIGS+GL+LK DPGVPIVY
Sbjct: 432 MLARDLQSIVLYDQEGKFVGVRRPSSRLPIDINGIKIEIVDAIGSTGLELKTDPGVPIVY 491

Query: 181 AGFGALMLTTCISYLSHSQVWALQDGTTVVIGGKTNRAKIEFPNEMNRLLDLVPEIINSS 360
           AGFGALMLTTC+SYLSHSQVWA+QDGT V++GGKTNRAK+EFP EM+RLLD VPEII  S
Sbjct: 492 AGFGALMLTTCVSYLSHSQVWAIQDGTVVIVGGKTNRAKVEFPEEMDRLLDKVPEIIEPS 551


>ref|XP_004137133.1| PREDICTED: cytochrome c biogenesis protein CCS1, chloroplastic-like
           [Cucumis sativus]
          Length = 557

 Score =  207 bits (526), Expect = 2e-51
 Identities = 100/120 (83%), Positives = 109/120 (90%)
 Frame = +1

Query: 1   MLARDLQSIVLYDQEGKFVGVRRPDSNLPVDIGGTKIVIVDAIGSSGLDLKIDPGVPIVY 180
           MLARDLQSIVLYDQEGKFVGVRRP S LP+DI G KI IVDAIGS+GL+LK DPGVPIVY
Sbjct: 429 MLARDLQSIVLYDQEGKFVGVRRPSSRLPIDINGIKIEIVDAIGSTGLELKTDPGVPIVY 488

Query: 181 AGFGALMLTTCISYLSHSQVWALQDGTTVVIGGKTNRAKIEFPNEMNRLLDLVPEIINSS 360
           AGFGALMLTTC+SYLSHSQVWA+QDGT V++GGKTNRAK+EFP EM+RLLD VPEII  S
Sbjct: 489 AGFGALMLTTCVSYLSHSQVWAIQDGTVVIVGGKTNRAKVEFPEEMDRLLDKVPEIIEPS 548


>ref|XP_002313066.1| predicted protein [Populus trichocarpa] gi|222849474|gb|EEE87021.1|
           predicted protein [Populus trichocarpa]
          Length = 432

 Score =  204 bits (520), Expect = 8e-51
 Identities = 99/130 (76%), Positives = 113/130 (86%)
 Frame = +1

Query: 1   MLARDLQSIVLYDQEGKFVGVRRPDSNLPVDIGGTKIVIVDAIGSSGLDLKIDPGVPIVY 180
           MLARDLQSIVLYDQEGKFVGVRRP+S LP+DI G KI+I DAIGSSGL+LK DPGVP+VY
Sbjct: 303 MLARDLQSIVLYDQEGKFVGVRRPNSKLPIDIDGMKIIIEDAIGSSGLELKTDPGVPVVY 362

Query: 181 AGFGALMLTTCISYLSHSQVWALQDGTTVVIGGKTNRAKIEFPNEMNRLLDLVPEIINSS 360
           AGFGALMLTTC+SYLSHSQ+WALQDGT V++GGKTNRAK EF  E+N LLD VPEI+ SS
Sbjct: 363 AGFGALMLTTCLSYLSHSQIWALQDGTAVIVGGKTNRAKAEFQYEINFLLDKVPEIVESS 422

Query: 361 PPETSEILDG 390
             + S++  G
Sbjct: 423 LSKQSDVASG 432