BLASTX nr result
ID: Coptis24_contig00034318
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00034318 (637 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002278632.2| PREDICTED: transcriptional activator Myb-lik... 77 3e-12 emb|CAN76166.1| hypothetical protein VITISV_041798 [Vitis vinifera] 76 5e-12 ref|XP_002307474.1| predicted protein [Populus trichocarpa] gi|2... 75 8e-12 ref|XP_002520250.1| r2r3-myb transcription factor, putative [Ric... 56 5e-06 >ref|XP_002278632.2| PREDICTED: transcriptional activator Myb-like [Vitis vinifera] gi|302142744|emb|CBI19947.3| unnamed protein product [Vitis vinifera] Length = 321 Score = 76.6 bits (187), Expect = 3e-12 Identities = 57/162 (35%), Positives = 78/162 (48%), Gaps = 9/162 (5%) Frame = +3 Query: 6 EFRKNYKDEVFQASPSNS---WHYSFP-GTSTTNSTPLKNFGTGQRDSFSTNSSFCITEK 173 EF K+ +F SPS+S W ++ +T NS+ G RD F++ SS I + Sbjct: 163 EFLNPNKEGIFSISPSSSSPSWTFARSISKATNNSSSTDLLRRGGRDHFNSCSSDGIMDS 222 Query: 174 DXXXXXXXXXXXXXXXXXXX-----AAGINKYNKVVHHPYSCSSIADAYGGSGMIKSDLV 338 A G Y +VV P S + D +G M+K + V Sbjct: 223 QNSLDRSLYRYFSNSSAYGGYRTSTAFGFPNYKRVVSGPVGYSKLGDPHG---MLKREFV 279 Query: 339 RFGDKLATQSSRLRVTTQQEQGDESIKHKDVPFIDFLGVGIS 464 FGD T +++ +T QQEQ DESIK K++PFIDFLGVGIS Sbjct: 280 NFGDNSPT-FAKMIMTNQQEQEDESIKQKNIPFIDFLGVGIS 320 >emb|CAN76166.1| hypothetical protein VITISV_041798 [Vitis vinifera] Length = 320 Score = 76.3 bits (186), Expect = 5e-12 Identities = 57/162 (35%), Positives = 78/162 (48%), Gaps = 9/162 (5%) Frame = +3 Query: 6 EFRKNYKDEVFQASPSNS---WHYSFP-GTSTTNSTPLKNFGTGQRDSFSTNSSFCITEK 173 EF K+ +F SPS+S W ++ +T NS+ G RD F++ SS I + Sbjct: 162 EFLNPNKEGIFSISPSSSSPSWTFARSISKATNNSSSTDLXRRGGRDHFNSCSSDGIMDS 221 Query: 174 DXXXXXXXXXXXXXXXXXXX-----AAGINKYNKVVHHPYSCSSIADAYGGSGMIKSDLV 338 A G Y +VV P S + D +G M+K + V Sbjct: 222 QNSLDRSLYRYFSNSSAYGGYRTSTAFGFPNYKRVVSGPVGYSKLGDPHG---MLKREFV 278 Query: 339 RFGDKLATQSSRLRVTTQQEQGDESIKHKDVPFIDFLGVGIS 464 FGD T +++ +T QQEQ DESIK K++PFIDFLGVGIS Sbjct: 279 NFGDNSPT-FAKMIMTNQQEQEDESIKQKNIPFIDFLGVGIS 319 >ref|XP_002307474.1| predicted protein [Populus trichocarpa] gi|222856923|gb|EEE94470.1| predicted protein [Populus trichocarpa] Length = 334 Score = 75.5 bits (184), Expect = 8e-12 Identities = 58/167 (34%), Positives = 81/167 (48%), Gaps = 13/167 (7%) Frame = +3 Query: 3 LEFRKNYKDEVFQASPSNS---WHYSFPGT--STTNSTPLKNFGTGQRDSFSTNSSFCIT 167 LEFR KD + SPS S W+++ P T ++ NS+ + RD++ +S FC T Sbjct: 169 LEFRNPGKDRILSISPSGSSPSWNFA-PSTIAASNNSSSVDLSRREGRDNYFNSSLFCTT 227 Query: 168 EKDXXXXXXXXXXXXXXXXXXXAA------GINKYNKVVHHPY-SCSSIADAYGGSGMIK 326 E + G+ Y +VV P+ S + D Y GMIK Sbjct: 228 ESSKLISDQPIYRYYTNSSVCGSYRSSSIFGLPNYRRVVPSPFGSYLKLGDDYENHGMIK 287 Query: 327 SDLVRFGDKLATQSSRLRVTTQQEQGD-ESIKHKDVPFIDFLGVGIS 464 +L + +T ++ + QE+GD ESIKHKD PFIDFLGVGIS Sbjct: 288 KELASCHNS-STLNNLRATSNHQEKGDHESIKHKDAPFIDFLGVGIS 333 >ref|XP_002520250.1| r2r3-myb transcription factor, putative [Ricinus communis] gi|223540469|gb|EEF42036.1| r2r3-myb transcription factor, putative [Ricinus communis] Length = 346 Score = 56.2 bits (134), Expect = 5e-06 Identities = 52/179 (29%), Positives = 79/179 (44%), Gaps = 25/179 (13%) Frame = +3 Query: 3 LEFRKNYKDE----VFQASPSNSWHYSFPGTSTT------NSTPLKNFGTGQ-RDSFSTN 149 LEFR D V +S S+ ++F ++ T N++ + T + RD++ Sbjct: 170 LEFRDLNTDRLLSVVSSSSTSSPNFWTFASSTKTAPFNKNNASSADHLSTEEGRDNYFNT 229 Query: 150 SSFCITEKDXXXXXXXXXXXXXXXXXXXAA--------GINKYNKVVHHPYSCSSIADA- 302 SFC T++ G+ Y +V+ P+ C I D Sbjct: 230 YSFCTTDQSSKFSDQSIYNRCYPNSSSVYGNYKNPAVFGLPNYRRVIPSPFGCLKIGDHD 289 Query: 303 YGGSGMIKSDLVRFGDKLATQSSRL--RVTTQQEQGD---ESIKHKDVPFIDFLGVGIS 464 + G IK D+++ SS L ++ Q+EQG ESI+ K+VPFIDFLGVGIS Sbjct: 290 FENHGTIKKDVLK---NFCENSSTLITNMSNQEEQGGDHHESIRQKEVPFIDFLGVGIS 345