BLASTX nr result

ID: Coptis24_contig00034312 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034312
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310160.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
ref|XP_002337493.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-09
emb|CAN61270.1| hypothetical protein VITISV_020532 [Vitis vinifera]    59   3e-07
emb|CAN82791.1| hypothetical protein VITISV_033795 [Vitis vinifera]    58   9e-07
emb|CAN63932.1| hypothetical protein VITISV_041812 [Vitis vinifera]    57   1e-06

>ref|XP_002310160.1| predicted protein [Populus trichocarpa] gi|222853063|gb|EEE90610.1|
           predicted protein [Populus trichocarpa]
          Length = 106

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 31/77 (40%), Positives = 52/77 (67%)
 Frame = -1

Query: 298 IPSYYNELVAMFQEIDQRVTS*NNSVEAVVHETSMMSRLRVHMFLRGLDQEYDQVRGEIL 119
           + +YY +L+ +FQE+D R  +     + V+     + RLRVH+FL GLD E++Q++GEIL
Sbjct: 5   LSTYYGDLMEIFQELDHRDRTKMKDPDDVITYRRSVERLRVHVFLNGLDAEFEQIQGEIL 64

Query: 118 RKELKFSLEQSYAYIRK 68
           RK+    LE+++ Y+R+
Sbjct: 65  RKDPVLDLEEAHTYVRR 81


>ref|XP_002337493.1| predicted protein [Populus trichocarpa] gi|222839466|gb|EEE77803.1|
           predicted protein [Populus trichocarpa]
          Length = 127

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 36/82 (43%), Positives = 50/82 (60%), Gaps = 7/82 (8%)
 Frame = -1

Query: 301 LIPSYYNELVAMFQEIDQRVTS*NNSVEAVVHETSMMSRLRVHMFLRGLDQEYDQVRGEI 122
           L+  YY +LV +FQE+D R  +     E V+     + RLRVH+FL GLD E++Q++GEI
Sbjct: 46  LLSIYYGDLVEIFQELDHRDRTIMKDPEDVITYRKSVERLRVHIFLNGLDAEFEQIQGEI 105

Query: 121 LRK-------ELKFSLEQSYAY 77
           LRK       E    LE++YAY
Sbjct: 106 LRKDPILDLEEAILDLEEAYAY 127


>emb|CAN61270.1| hypothetical protein VITISV_020532 [Vitis vinifera]
          Length = 369

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 32/77 (41%), Positives = 44/77 (57%)
 Frame = -1

Query: 298 IPSYYNELVAMFQEIDQRVTS*NNSVEAVVHETSMMSRLRVHMFLRGLDQEYDQVRGEIL 119
           +  YY EL   F E+D R        E +      + R +VH+FL GLD +++QVRGEIL
Sbjct: 48  LSKYYGELTESFCELDHRDKVVMKDPEDIATYRKSIERQQVHIFLVGLDGDFEQVRGEIL 107

Query: 118 RKELKFSLEQSYAYIRK 68
           RK+    LE+ YA IR+
Sbjct: 108 RKDPLPDLEECYALIRR 124


>emb|CAN82791.1| hypothetical protein VITISV_033795 [Vitis vinifera]
          Length = 314

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 35/99 (35%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
 Frame = -1

Query: 298 IPSYYNELVAMFQEIDQRVTS*NNSVEAVVHETSMMSRLRVHMFLRGLDQEYDQVRGEIL 119
           +  YY EL  +F E+D R        E +      + R RV++FL GL  +++QVRGEIL
Sbjct: 129 LSEYYGELTELFCELDHRDKVVMKDPEDIAAYRKSIERQRVNIFLAGLGGDFEQVRGEIL 188

Query: 118 RKELKFSLEQSYAYIRKVQSEKQAM-GRSLSTESSVLAV 5
           RK+    LE+ YA IR+      +M   S + ++S + V
Sbjct: 189 RKDPLPDLEECYALIRREAVRHASMKAESNNPDTSAMVV 227


>emb|CAN63932.1| hypothetical protein VITISV_041812 [Vitis vinifera]
          Length = 170

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 31/76 (40%), Positives = 43/76 (56%)
 Frame = -1

Query: 298 IPSYYNELVAMFQEIDQRVTS*NNSVEAVVHETSMMSRLRVHMFLRGLDQEYDQVRGEIL 119
           +  YY EL+ +F E+D R        E +      + R RVH+FL G D +++QVR EIL
Sbjct: 95  LSEYYGELIEIFCELDHRDKVVMKDPEDIAAYRKSIERQRVHIFLAGSDGDFEQVREEIL 154

Query: 118 RKELKFSLEQSYAYIR 71
           RK+    LE+ YA IR
Sbjct: 155 RKDPLPDLEECYALIR 170


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