BLASTX nr result

ID: Coptis24_contig00034307 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034307
         (248 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFV15381.1| AGO4A [Solanum lycopersicum]                            97   2e-18
gb|ABC61505.1| AGO4-2, partial [Nicotiana benthamiana]                 91   7e-17
ref|XP_002271447.2| PREDICTED: protein argonaute 16-like [Vitis ...    89   3e-16
emb|CBI28870.3| unnamed protein product [Vitis vinifera]               89   3e-16
ref|XP_003555656.1| PREDICTED: protein argonaute 4-like [Glycine...    89   4e-16

>gb|AFV15381.1| AGO4A [Solanum lycopersicum]
          Length = 909

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 46/82 (56%), Positives = 58/82 (70%)
 Frame = +2

Query: 2   KLVLPRKIEHWAIVNFSVSCDVQELSKDLIRYGKQHGILFKDPYVVIKENPSVRTESPLD 181
           +LV P KIE WA+VNFS  C+VQ L  DLI+ GKQ GI+ +DP+ V +E+P VR   PL 
Sbjct: 484 RLVDPTKIERWAVVNFSARCNVQGLVSDLIKCGKQKGIMVEDPFDVFEESPQVRRAPPLV 543

Query: 182 RVENMLEQIRGKRPFTPQFLLC 247
           RVE M EQ++ K P  P+FLLC
Sbjct: 544 RVEKMFEQVQSKLPGAPKFLLC 565


>gb|ABC61505.1| AGO4-2, partial [Nicotiana benthamiana]
          Length = 905

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 42/82 (51%), Positives = 56/82 (68%)
 Frame = +2

Query: 2   KLVLPRKIEHWAIVNFSVSCDVQELSKDLIRYGKQHGILFKDPYVVIKENPSVRTESPLD 181
           +LV P KIE WA+VNFS  C++Q L  DLI+ GK  GI+ +DP+ V +E+P  R   PL 
Sbjct: 480 RLVDPTKIERWAVVNFSARCNIQGLISDLIKCGKMKGIMVEDPFDVFEESPQFRRAPPLV 539

Query: 182 RVENMLEQIRGKRPFTPQFLLC 247
           RVE M E+++ K P  P+FLLC
Sbjct: 540 RVEKMFEEVQSKLPGAPKFLLC 561


>ref|XP_002271447.2| PREDICTED: protein argonaute 16-like [Vitis vinifera]
          Length = 960

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 41/82 (50%), Positives = 55/82 (67%)
 Frame = +2

Query: 2   KLVLPRKIEHWAIVNFSVSCDVQELSKDLIRYGKQHGILFKDPYVVIKENPSVRTESPLD 181
           KL+ P +IE WA+VNFS  CD   LS++LI  G+  GIL + P+ +I+E+P  R  SP+ 
Sbjct: 535 KLLTPVRIERWAVVNFSARCDTSHLSRELINCGRNKGILIERPHTLIEEDPQSRRASPVA 594

Query: 182 RVENMLEQIRGKRPFTPQFLLC 247
           RVE M E +R K P  P+FLLC
Sbjct: 595 RVEKMFEIVRAKLPGPPEFLLC 616


>emb|CBI28870.3| unnamed protein product [Vitis vinifera]
          Length = 900

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 41/82 (50%), Positives = 55/82 (67%)
 Frame = +2

Query: 2   KLVLPRKIEHWAIVNFSVSCDVQELSKDLIRYGKQHGILFKDPYVVIKENPSVRTESPLD 181
           KL+ P +IE WA+VNFS  CD   LS++LI  G+  GIL + P+ +I+E+P  R  SP+ 
Sbjct: 475 KLLTPVRIERWAVVNFSARCDTSHLSRELINCGRNKGILIERPHTLIEEDPQSRRASPVA 534

Query: 182 RVENMLEQIRGKRPFTPQFLLC 247
           RVE M E +R K P  P+FLLC
Sbjct: 535 RVEKMFEIVRAKLPGPPEFLLC 556


>ref|XP_003555656.1| PREDICTED: protein argonaute 4-like [Glycine max]
          Length = 915

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 43/82 (52%), Positives = 50/82 (60%)
 Frame = +2

Query: 2   KLVLPRKIEHWAIVNFSVSCDVQELSKDLIRYGKQHGILFKDPYVVIKENPSVRTESPLD 181
           K V P KIE WA+ NFS  CDV+ L +DLIR G   GI  + P+ V  ENP  R   P+ 
Sbjct: 490 KFVEPSKIERWAVANFSARCDVRGLVRDLIRIGDMKGITIEQPFDVFDENPQFRRAPPMV 549

Query: 182 RVENMLEQIRGKRPFTPQFLLC 247
           RVE M E I+ K P  PQFLLC
Sbjct: 550 RVEKMFEHIQSKLPGAPQFLLC 571


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