BLASTX nr result
ID: Coptis24_contig00034307
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00034307 (248 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AFV15381.1| AGO4A [Solanum lycopersicum] 97 2e-18 gb|ABC61505.1| AGO4-2, partial [Nicotiana benthamiana] 91 7e-17 ref|XP_002271447.2| PREDICTED: protein argonaute 16-like [Vitis ... 89 3e-16 emb|CBI28870.3| unnamed protein product [Vitis vinifera] 89 3e-16 ref|XP_003555656.1| PREDICTED: protein argonaute 4-like [Glycine... 89 4e-16 >gb|AFV15381.1| AGO4A [Solanum lycopersicum] Length = 909 Score = 96.7 bits (239), Expect = 2e-18 Identities = 46/82 (56%), Positives = 58/82 (70%) Frame = +2 Query: 2 KLVLPRKIEHWAIVNFSVSCDVQELSKDLIRYGKQHGILFKDPYVVIKENPSVRTESPLD 181 +LV P KIE WA+VNFS C+VQ L DLI+ GKQ GI+ +DP+ V +E+P VR PL Sbjct: 484 RLVDPTKIERWAVVNFSARCNVQGLVSDLIKCGKQKGIMVEDPFDVFEESPQVRRAPPLV 543 Query: 182 RVENMLEQIRGKRPFTPQFLLC 247 RVE M EQ++ K P P+FLLC Sbjct: 544 RVEKMFEQVQSKLPGAPKFLLC 565 >gb|ABC61505.1| AGO4-2, partial [Nicotiana benthamiana] Length = 905 Score = 91.3 bits (225), Expect = 7e-17 Identities = 42/82 (51%), Positives = 56/82 (68%) Frame = +2 Query: 2 KLVLPRKIEHWAIVNFSVSCDVQELSKDLIRYGKQHGILFKDPYVVIKENPSVRTESPLD 181 +LV P KIE WA+VNFS C++Q L DLI+ GK GI+ +DP+ V +E+P R PL Sbjct: 480 RLVDPTKIERWAVVNFSARCNIQGLISDLIKCGKMKGIMVEDPFDVFEESPQFRRAPPLV 539 Query: 182 RVENMLEQIRGKRPFTPQFLLC 247 RVE M E+++ K P P+FLLC Sbjct: 540 RVEKMFEEVQSKLPGAPKFLLC 561 >ref|XP_002271447.2| PREDICTED: protein argonaute 16-like [Vitis vinifera] Length = 960 Score = 89.4 bits (220), Expect = 3e-16 Identities = 41/82 (50%), Positives = 55/82 (67%) Frame = +2 Query: 2 KLVLPRKIEHWAIVNFSVSCDVQELSKDLIRYGKQHGILFKDPYVVIKENPSVRTESPLD 181 KL+ P +IE WA+VNFS CD LS++LI G+ GIL + P+ +I+E+P R SP+ Sbjct: 535 KLLTPVRIERWAVVNFSARCDTSHLSRELINCGRNKGILIERPHTLIEEDPQSRRASPVA 594 Query: 182 RVENMLEQIRGKRPFTPQFLLC 247 RVE M E +R K P P+FLLC Sbjct: 595 RVEKMFEIVRAKLPGPPEFLLC 616 >emb|CBI28870.3| unnamed protein product [Vitis vinifera] Length = 900 Score = 89.4 bits (220), Expect = 3e-16 Identities = 41/82 (50%), Positives = 55/82 (67%) Frame = +2 Query: 2 KLVLPRKIEHWAIVNFSVSCDVQELSKDLIRYGKQHGILFKDPYVVIKENPSVRTESPLD 181 KL+ P +IE WA+VNFS CD LS++LI G+ GIL + P+ +I+E+P R SP+ Sbjct: 475 KLLTPVRIERWAVVNFSARCDTSHLSRELINCGRNKGILIERPHTLIEEDPQSRRASPVA 534 Query: 182 RVENMLEQIRGKRPFTPQFLLC 247 RVE M E +R K P P+FLLC Sbjct: 535 RVEKMFEIVRAKLPGPPEFLLC 556 >ref|XP_003555656.1| PREDICTED: protein argonaute 4-like [Glycine max] Length = 915 Score = 89.0 bits (219), Expect = 4e-16 Identities = 43/82 (52%), Positives = 50/82 (60%) Frame = +2 Query: 2 KLVLPRKIEHWAIVNFSVSCDVQELSKDLIRYGKQHGILFKDPYVVIKENPSVRTESPLD 181 K V P KIE WA+ NFS CDV+ L +DLIR G GI + P+ V ENP R P+ Sbjct: 490 KFVEPSKIERWAVANFSARCDVRGLVRDLIRIGDMKGITIEQPFDVFDENPQFRRAPPMV 549 Query: 182 RVENMLEQIRGKRPFTPQFLLC 247 RVE M E I+ K P PQFLLC Sbjct: 550 RVEKMFEHIQSKLPGAPQFLLC 571