BLASTX nr result

ID: Coptis24_contig00034285 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034285
         (220 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004146244.1| PREDICTED: uncharacterized protein LOC101221...    60   2e-07
ref|XP_002523266.1| conserved hypothetical protein [Ricinus comm...    59   5e-07
ref|XP_002317372.1| predicted protein [Populus trichocarpa] gi|2...    58   9e-07
gb|ABK96262.1| unknown [Populus trichocarpa x Populus deltoides]       58   9e-07
ref|XP_002282834.1| PREDICTED: uncharacterized protein LOC100267...    57   2e-06

>ref|XP_004146244.1| PREDICTED: uncharacterized protein LOC101221005 [Cucumis sativus]
           gi|449495512|ref|XP_004159863.1| PREDICTED:
           uncharacterized LOC101221005 [Cucumis sativus]
          Length = 282

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 36/72 (50%), Positives = 42/72 (58%)
 Frame = -3

Query: 218 TSVLLTGAISVXXXXXXXXXXXXXKELKYRSDGVKKSIKEEALDNLKGMKLATEDXXXXX 39
           TSVLLTGAISV             KELK+RS GVKKS+KEEA+D+LK +     +     
Sbjct: 95  TSVLLTGAISVFLFRSLRRRAKRVKELKFRSGGVKKSLKEEAMDSLKAISTGPIESKSTP 154

Query: 38  XXAQALLGGIAA 3
              QA LG IAA
Sbjct: 155 SPIQAFLGAIAA 166


>ref|XP_002523266.1| conserved hypothetical protein [Ricinus communis]
           gi|223537479|gb|EEF39105.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 285

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 34/72 (47%), Positives = 42/72 (58%)
 Frame = -3

Query: 218 TSVLLTGAISVXXXXXXXXXXXXXKELKYRSDGVKKSIKEEALDNLKGMKLATEDXXXXX 39
           TSVLLTG+I V             KELK+RS G KK++KEEALD+LK M  A+ D     
Sbjct: 98  TSVLLTGSIGVFLFRALRRRAKRAKELKFRSSGAKKTMKEEALDSLKAMGSASIDAQKPP 157

Query: 38  XXAQALLGGIAA 3
              Q  LGG++A
Sbjct: 158 SPLQTFLGGVSA 169


>ref|XP_002317372.1| predicted protein [Populus trichocarpa] gi|222860437|gb|EEE97984.1|
           predicted protein [Populus trichocarpa]
          Length = 211

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 36/72 (50%), Positives = 41/72 (56%)
 Frame = -3

Query: 218 TSVLLTGAISVXXXXXXXXXXXXXKELKYRSDGVKKSIKEEALDNLKGMKLATEDXXXXX 39
           TSVLLTGAISV             KELK+RS G KK++KEEALD+LK    A  D     
Sbjct: 31  TSVLLTGAISVFLFRSLRRRAKRSKELKFRSSGAKKTLKEEALDSLKTFGSAPIDVKKPP 90

Query: 38  XXAQALLGGIAA 3
              QA LG I+A
Sbjct: 91  SPVQAFLGAISA 102


>gb|ABK96262.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 238

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 36/72 (50%), Positives = 41/72 (56%)
 Frame = -3

Query: 218 TSVLLTGAISVXXXXXXXXXXXXXKELKYRSDGVKKSIKEEALDNLKGMKLATEDXXXXX 39
           TSVLLTGAISV             KELK+RS G KK++KEEALD+LK    A  D     
Sbjct: 98  TSVLLTGAISVFLFRSLRRRAKRSKELKFRSSGAKKTLKEEALDSLKTFGSAPIDVKKPP 157

Query: 38  XXAQALLGGIAA 3
              QA LG I+A
Sbjct: 158 SPVQAFLGAISA 169


>ref|XP_002282834.1| PREDICTED: uncharacterized protein LOC100267434 [Vitis vinifera]
           gi|302142945|emb|CBI20240.3| unnamed protein product
           [Vitis vinifera]
          Length = 277

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 37/72 (51%), Positives = 43/72 (59%)
 Frame = -3

Query: 218 TSVLLTGAISVXXXXXXXXXXXXXKELKYRSDGVKKSIKEEALDNLKGMKLATEDXXXXX 39
           TSVLLTGAISV             KEL++RS GVKK++KEEALD+LK M   +       
Sbjct: 91  TSVLLTGAISVFLFRSIRRRVKRAKELRFRSSGVKKTLKEEALDSLKAMGSGSV-KAAPP 149

Query: 38  XXAQALLGGIAA 3
              QALLGGI A
Sbjct: 150 SPVQALLGGITA 161


Top