BLASTX nr result

ID: Coptis24_contig00034273 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034273
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319207.1| predicted protein [Populus trichocarpa] gi|2...   110   1e-22
ref|XP_002530965.1| conserved hypothetical protein [Ricinus comm...   108   5e-22
ref|XP_002266794.2| PREDICTED: uncharacterized protein LOC100248...   106   2e-21
emb|CAN82876.1| hypothetical protein VITISV_043530 [Vitis vinifera]   106   2e-21
ref|XP_002325891.1| predicted protein [Populus trichocarpa] gi|2...   105   4e-21

>ref|XP_002319207.1| predicted protein [Populus trichocarpa] gi|222857583|gb|EEE95130.1|
           predicted protein [Populus trichocarpa]
          Length = 1661

 Score =  110 bits (275), Expect = 1e-22
 Identities = 51/80 (63%), Positives = 64/80 (80%)
 Frame = -3

Query: 260 DGAKSVFSWTEDDEKNLMDLGTSELERDQRLEKLIAKRRARQNFSKVVEKNLIDFDSNDA 81
           D +KS   WTEDD+KNLMDLGT ELER+QRLE LIA+RRAR+N   + EKNLID D+ D 
Sbjct: 356 DESKSAIKWTEDDQKNLMDLGTLELERNQRLESLIARRRARRNMRLMAEKNLIDLDAADM 415

Query: 80  PLHIPSITTVKTNPFEVPYN 21
           P++IPSI+T + NPF+ PY+
Sbjct: 416 PINIPSISTARHNPFDFPYD 435


>ref|XP_002530965.1| conserved hypothetical protein [Ricinus communis]
           gi|223529480|gb|EEF31437.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1204

 Score =  108 bits (270), Expect = 5e-22
 Identities = 50/81 (61%), Positives = 64/81 (79%)
 Frame = -3

Query: 260 DGAKSVFSWTEDDEKNLMDLGTSELERDQRLEKLIAKRRARQNFSKVVEKNLIDFDSNDA 81
           D +KS   WTEDD+KNLMDLGTSE+ER+ RLE LIA+RRAR++   + EKNLID D  D 
Sbjct: 362 DESKSAIKWTEDDQKNLMDLGTSEIERNLRLENLIARRRARKSMRLMAEKNLIDLDGADL 421

Query: 80  PLHIPSITTVKTNPFEVPYNS 18
           PL+IP I+T + NPF++PY+S
Sbjct: 422 PLNIPPISTTRRNPFDLPYDS 442


>ref|XP_002266794.2| PREDICTED: uncharacterized protein LOC100248405 [Vitis vinifera]
          Length = 1864

 Score =  106 bits (264), Expect = 2e-21
 Identities = 50/81 (61%), Positives = 62/81 (76%)
 Frame = -3

Query: 260 DGAKSVFSWTEDDEKNLMDLGTSELERDQRLEKLIAKRRARQNFSKVVEKNLIDFDSNDA 81
           D  KS  +WTEDD+KNLMDLGTSELER+QRLE LI +RRAR+N   V EKNLID +S D 
Sbjct: 318 DETKSGITWTEDDQKNLMDLGTSELERNQRLENLILRRRARKNMKVVAEKNLIDLESADP 377

Query: 80  PLHIPSITTVKTNPFEVPYNS 18
           P ++P I+T + NPF+ P +S
Sbjct: 378 PFYVPPISTTRRNPFDSPCDS 398


>emb|CAN82876.1| hypothetical protein VITISV_043530 [Vitis vinifera]
          Length = 1894

 Score =  106 bits (264), Expect = 2e-21
 Identities = 50/81 (61%), Positives = 62/81 (76%)
 Frame = -3

Query: 260 DGAKSVFSWTEDDEKNLMDLGTSELERDQRLEKLIAKRRARQNFSKVVEKNLIDFDSNDA 81
           D  KS  +WTEDD+KNLMDLGTSELER+QRLE LI +RRAR+N   V EKNLID +S D 
Sbjct: 318 DETKSGITWTEDDQKNLMDLGTSELERNQRLENLILRRRARKNMKVVAEKNLIDLESADP 377

Query: 80  PLHIPSITTVKTNPFEVPYNS 18
           P ++P I+T + NPF+ P +S
Sbjct: 378 PFYVPPISTTRRNPFDSPCDS 398


>ref|XP_002325891.1| predicted protein [Populus trichocarpa] gi|222862766|gb|EEF00273.1|
           predicted protein [Populus trichocarpa]
          Length = 1384

 Score =  105 bits (262), Expect = 4e-21
 Identities = 48/80 (60%), Positives = 62/80 (77%)
 Frame = -3

Query: 260 DGAKSVFSWTEDDEKNLMDLGTSELERDQRLEKLIAKRRARQNFSKVVEKNLIDFDSNDA 81
           D +KS   WTEDD+KNLMDLGT ELER+ RLE LI++RRA +N   + EKNLID D+ D 
Sbjct: 364 DESKSAIKWTEDDQKNLMDLGTLELERNLRLESLISRRRACRNMRLMAEKNLIDLDAADL 423

Query: 80  PLHIPSITTVKTNPFEVPYN 21
           P+++PSI+T + NPF+ PYN
Sbjct: 424 PINVPSISTARQNPFDFPYN 443


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