BLASTX nr result
ID: Coptis24_contig00034261
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00034261 (609 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002527914.1| conserved hypothetical protein [Ricinus comm... 132 4e-29 ref|XP_002314603.1| predicted protein [Populus trichocarpa] gi|2... 125 8e-27 ref|NP_001159022.1| poor homologous synapsis 1 protein [Zea mays... 118 9e-25 ref|XP_003634252.1| PREDICTED: uncharacterized protein LOC100854... 116 4e-24 gb|AFW86602.1| hypothetical protein ZEAMMB73_074178 [Zea mays] 115 5e-24 >ref|XP_002527914.1| conserved hypothetical protein [Ricinus communis] gi|223532689|gb|EEF34471.1| conserved hypothetical protein [Ricinus communis] Length = 303 Score = 132 bits (333), Expect = 4e-29 Identities = 86/201 (42%), Positives = 111/201 (55%), Gaps = 3/201 (1%) Frame = -2 Query: 608 GTWFPSSS-NAYLQIVTDFLNPESVLLVSIGDKVFEEHFTCNLHFSWPQVSCVSTQCPPR 432 GTW S S A LQI +VL V + + EEH+ LHF+WP VSC+S PPR Sbjct: 59 GTWLSSHSPTASLQIRNYKSISHAVLTVCLHGNILEEHYVSKLHFTWPLVSCLSGY-PPR 117 Query: 431 GSRVIFASYKDCHGQIQKFALRFASSCDAETFIGALKDSLKDAMEMGVTRXXXXXXXXXX 252 GSR +F SYKD GQIQKFALRF+ +AETFI ALKD LKD+ E Sbjct: 118 GSRSLFVSYKDSLGQIQKFALRFSVISEAETFINALKDILKDSTETEPLNSDIRSEISLE 177 Query: 251 SEFVPSDRLQFR--PEELSFVDPVATYSPQMRSILNYNSNENRCCQESLVGQGQNFERVS 78 S+F+ +D + R EE S + PV T S + + L+ N + Q +N E +S Sbjct: 178 SKFMSADGIPSRACEEESSVMTPVQTSSFETQFPLSLNYEVEQDSQTEKTLPSRNHEDIS 237 Query: 77 QVDLPPSFTALLTNCSTEVEQ 15 LPPSF + L+NC +EV+Q Sbjct: 238 SA-LPPSFASFLSNCCSEVQQ 257 >ref|XP_002314603.1| predicted protein [Populus trichocarpa] gi|222863643|gb|EEF00774.1| predicted protein [Populus trichocarpa] Length = 306 Score = 125 bits (313), Expect = 8e-27 Identities = 81/203 (39%), Positives = 115/203 (56%), Gaps = 5/203 (2%) Frame = -2 Query: 608 GTWFPS-SSNAYLQIVTDFLNPESVLL-VSIGDKVFEEHFTCNLHFSWPQVSCVSTQCPP 435 GTW S S+ A LQ++ N + +L +S+ V EEH+ LHFSWPQVSCVS P Sbjct: 64 GTWISSVSATASLQLLNYQSNSKDAILGLSLNGTVLEEHYVWKLHFSWPQVSCVSGY-PS 122 Query: 434 RGSRVIFASYKDCHGQIQKFALRFASSCDAETFIGALKDSLKDAMEMGVTRXXXXXXXXX 255 RG+R +F ++KD +IQKF RF++ +AE FI ALK L+D +E Sbjct: 123 RGTRAVFVTFKDSLDEIQKFGFRFSTFSEAEAFINALKVILEDPIETERLDSDFQSAISS 182 Query: 254 XSEFVPSDRLQFR---PEELSFVDPVATYSPQMRSILNYNSNENRCCQESLVGQGQNFER 84 S F+P+D + R EE S + PV YSPQ++ L++N + + N E Sbjct: 183 QSVFMPTDGYKPRAWVEEESSTMGPVQDYSPQLQ--LSWNKEAEQASLSTEKSLNHNNEG 240 Query: 83 VSQVDLPPSFTALLTNCSTEVEQ 15 +S V +PPSFT+LL +C +EV+Q Sbjct: 241 ISPV-MPPSFTSLLLDCCSEVKQ 262 >ref|NP_001159022.1| poor homologous synapsis 1 protein [Zea mays] gi|195637896|gb|ACG38416.1| poor homologous synapsis 1 protein [Zea mays] Length = 346 Score = 118 bits (295), Expect = 9e-25 Identities = 75/203 (36%), Positives = 109/203 (53%), Gaps = 3/203 (1%) Frame = -2 Query: 608 GTWFPSSSNAYLQIVTDFL-NPESVLLVSIGDKVFEEHFTCNLHFSWPQVSCVSTQCPPR 432 GTW P+S A L + L + VL +SIGD VFEEHF L+FSWPQV+CV TQCP R Sbjct: 68 GTWIPASCPASLCVCHPSLPSAVPVLTISIGDVVFEEHFVSILNFSWPQVTCV-TQCPIR 126 Query: 431 GSRVIFASYKDCHGQIQKFALRFASSCDAETFIGALKDSLKDAMEMGVT--RXXXXXXXX 258 GSRV+F S+ D QIQKFA+RF CDA++F+ ++ S + M + Sbjct: 127 GSRVVFVSFCDKFKQIQKFAVRFPQPCDADSFLSCVECSCGSSGTMDIIPFGNDYVCEDS 186 Query: 257 XXSEFVPSDRLQFRPEELSFVDPVATYSPQMRSILNYNSNENRCCQESLVGQGQNFERVS 78 SE++ S+ L R ++ S ++ + +NY+ ++ E L + + Sbjct: 187 SASEYIASNGLHHRLDDASNLEEQCSDHTIDEPPMNYHEETDQPVLEPLSASNTS----N 242 Query: 77 QVDLPPSFTALLTNCSTEVEQEK 9 PPSF +L NCS + +QE+ Sbjct: 243 NSAFPPSFNQMLKNCSIDYDQEE 265 >ref|XP_003634252.1| PREDICTED: uncharacterized protein LOC100854468 [Vitis vinifera] gi|297733727|emb|CBI14974.3| unnamed protein product [Vitis vinifera] Length = 268 Score = 116 bits (290), Expect = 4e-24 Identities = 73/202 (36%), Positives = 111/202 (54%), Gaps = 3/202 (1%) Frame = -2 Query: 608 GTWFPSSSNAYLQIVTDFLNPESVLLVSIGDKVFEEHFTCNLHFSWPQVSCVSTQCPPRG 429 GTW SS A L +++ + E VL++S+ +K+ EEHF LHFSWPQVSCV+ +CP RG Sbjct: 57 GTWV-SSPTASLHLLSHHFSAELVLVISLQEKIHEEHFISKLHFSWPQVSCVN-ECPVRG 114 Query: 428 SRVIFASYKDCHGQIQKFALRFASSCDAETFIGALKDSLK---DAMEMGVTRXXXXXXXX 258 SRVIFASY DC GQIQKFA+RF+++ ++++F+ ++K ++K ++ E+G + Sbjct: 115 SRVIFASYSDCVGQIQKFAMRFSAASESQSFMDSVKATMKPERNSSELGKS--------- 165 Query: 257 XXSEFVPSDRLQFRPEELSFVDPVATYSPQMRSILNYNSNENRCCQESLVGQGQNFERVS 78 EF+ S+ +Q+R E + P + + + E C Sbjct: 166 SQFEFICSNGVQYRDAEDN--KPPLSCEGMQYAYSKDHDLEGNC---------------- 207 Query: 77 QVDLPPSFTALLTNCSTEVEQE 12 LPPSFT LL ++E Sbjct: 208 -ATLPPSFTTLLAGVCIAPKKE 228 >gb|AFW86602.1| hypothetical protein ZEAMMB73_074178 [Zea mays] Length = 342 Score = 115 bits (289), Expect = 5e-24 Identities = 75/203 (36%), Positives = 108/203 (53%), Gaps = 3/203 (1%) Frame = -2 Query: 608 GTWFPSSSNAYLQIVTDFL-NPESVLLVSIGDKVFEEHFTCNLHFSWPQVSCVSTQCPPR 432 GTW P+S A L + L + VL +SIGD VFEEHF L+FSWPQV+CV TQCP R Sbjct: 68 GTWIPASCPASLCVCHPSLPSAVPVLTISIGDVVFEEHFVSILNFSWPQVTCV-TQCPIR 126 Query: 431 GSRVIFASYKDCHGQIQKFALRFASSCDAETFIGALKDSLKDAMEMGVT--RXXXXXXXX 258 GSRV+F S+ D QIQKFA+RF CDAE+F+ ++ S + M + Sbjct: 127 GSRVVFVSFCDKFKQIQKFAVRFPQPCDAESFLSCVECSCGSSGTMDIIPFGSDYVCEDS 186 Query: 257 XXSEFVPSDRLQFRPEELSFVDPVATYSPQMRSILNYNSNENRCCQESLVGQGQNFERVS 78 SE++ S+ L R ++ S ++ +NY+ ++ E L + + Sbjct: 187 SASEYIVSNGLHHRLDDASNLEEQCFDHTIDEPPMNYHEETDQHVLEPLSASNTS----N 242 Query: 77 QVDLPPSFTALLTNCSTEVEQEK 9 PPSF +L +CS + +QE+ Sbjct: 243 NSAFPPSFNQMLKSCSIDYDQEE 265