BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034258
         (391 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313479.1| histone deacetylase [Populus trichocarpa] gi...   168   5e-40
ref|XP_003596882.1| Histone deacetylase [Medicago truncatula] gi...   166   2e-39
gb|ACJ84689.1| unknown [Medicago truncatula] gi|388519583|gb|AFK...   166   2e-39
ref|XP_003540263.1| PREDICTED: histone deacetylase 8-like isofor...   165   4e-39
emb|CAN79825.1| hypothetical protein VITISV_025116 [Vitis vinifera]   164   9e-39

>ref|XP_002313479.1| histone deacetylase [Populus trichocarpa]
           gi|222849887|gb|EEE87434.1| histone deacetylase [Populus
           trichocarpa]
          Length = 379

 Score =  168 bits (425), Expect = 5e-40
 Identities = 80/106 (75%), Positives = 87/106 (82%)
 Frame = -2

Query: 318 INVFWDEGMLKHYTGTGVFDTLTDPGFLQVLEKHPENSDRVKNMVSILKKGPISQYITWC 139
           I+VFW EGML H TG GVFD+ TDPGFL VLEKHPENSDR+KNMVSIL+KGPIS YI+W 
Sbjct: 10  IDVFWHEGMLNHETGKGVFDSGTDPGFLDVLEKHPENSDRIKNMVSILQKGPISPYISWQ 69

Query: 138 PGRVAGVSELLSFHTQEYIDELIEADKAGGKTFCAGTILNPGSWNA 1
            GR A V ELLSFH  EYIDEL+EA K GGK  CAGT LNPGSW+A
Sbjct: 70  HGRPAQVPELLSFHAPEYIDELVEAGKQGGKMICAGTFLNPGSWDA 115


>ref|XP_003596882.1| Histone deacetylase [Medicago truncatula]
           gi|87240922|gb|ABD32780.1| Histone deacetylase
           superfamily [Medicago truncatula]
           gi|355485930|gb|AES67133.1| Histone deacetylase
           [Medicago truncatula]
          Length = 386

 Score =  166 bits (420), Expect = 2e-39
 Identities = 78/107 (72%), Positives = 88/107 (82%)
 Frame = -2

Query: 321 RINVFWDEGMLKHYTGTGVFDTLTDPGFLQVLEKHPENSDRVKNMVSILKKGPISQYITW 142
           +I VFW EGMLKH TG GVFDT  DPGFL +LEKHPENSDRVKNMVSILK+GPIS Y++W
Sbjct: 16  KIEVFWHEGMLKHDTGNGVFDTGIDPGFLDILEKHPENSDRVKNMVSILKRGPISPYVSW 75

Query: 141 CPGRVAGVSELLSFHTQEYIDELIEADKAGGKTFCAGTILNPGSWNA 1
             GR A + ELLSFHT EYI+EL++ADK G K  CAGT LNPGSW+A
Sbjct: 76  HLGRHALIPELLSFHTPEYINELVKADKKGRKVLCAGTFLNPGSWDA 122


>gb|ACJ84689.1| unknown [Medicago truncatula] gi|388519583|gb|AFK47853.1| unknown
           [Medicago truncatula]
          Length = 386

 Score =  166 bits (420), Expect = 2e-39
 Identities = 78/107 (72%), Positives = 88/107 (82%)
 Frame = -2

Query: 321 RINVFWDEGMLKHYTGTGVFDTLTDPGFLQVLEKHPENSDRVKNMVSILKKGPISQYITW 142
           +I VFW EGMLKH TG GVFDT  DPGFL +LEKHPENSDRVKNMVSILK+GPIS Y++W
Sbjct: 16  KIEVFWHEGMLKHDTGNGVFDTGIDPGFLDILEKHPENSDRVKNMVSILKRGPISPYVSW 75

Query: 141 CPGRVAGVSELLSFHTQEYIDELIEADKAGGKTFCAGTILNPGSWNA 1
             GR A + ELLSFHT EYI+EL++ADK G K  CAGT LNPGSW+A
Sbjct: 76  HLGRHALIPELLSFHTPEYINELVKADKKGRKVLCAGTFLNPGSWDA 122


>ref|XP_003540263.1| PREDICTED: histone deacetylase 8-like isoform 1 [Glycine max]
          Length = 381

 Score =  165 bits (417), Expect = 4e-39
 Identities = 77/107 (71%), Positives = 87/107 (81%)
 Frame = -2

Query: 321 RINVFWDEGMLKHYTGTGVFDTLTDPGFLQVLEKHPENSDRVKNMVSILKKGPISQYITW 142
           +I+VFW EGMLKH TG GVFDT  DPGFL+VLEKHPENSDRVKN+VSILK+GPIS YI+W
Sbjct: 16  QIDVFWHEGMLKHDTGNGVFDTGMDPGFLEVLEKHPENSDRVKNLVSILKRGPISPYISW 75

Query: 141 CPGRVAGVSELLSFHTQEYIDELIEADKAGGKTFCAGTILNPGSWNA 1
             G  A + EL SFHT EYI+EL+E DK GGK  C GT LNPGSW+A
Sbjct: 76  HLGTPAKIPELFSFHTPEYINELVEVDKEGGKQLCGGTFLNPGSWDA 122


>emb|CAN79825.1| hypothetical protein VITISV_025116 [Vitis vinifera]
          Length = 379

 Score =  164 bits (414), Expect = 9e-39
 Identities = 76/106 (71%), Positives = 88/106 (83%)
 Frame = -2

Query: 318 INVFWDEGMLKHYTGTGVFDTLTDPGFLQVLEKHPENSDRVKNMVSILKKGPISQYITWC 139
           INVFW EGMLKH TG GVFDT  DPGFL VLEKHPENS+R++NMVSILK+GPIS YI+W 
Sbjct: 10  INVFWHEGMLKHDTGNGVFDTGMDPGFLDVLEKHPENSERLRNMVSILKRGPISPYISWH 69

Query: 138 PGRVAGVSELLSFHTQEYIDELIEADKAGGKTFCAGTILNPGSWNA 1
            G  A +S LLSFHT EYI+EL++AD+ GGK  C+GT LNPGSW+A
Sbjct: 70  SGTPALISHLLSFHTPEYINELVQADRDGGKELCSGTFLNPGSWDA 115