BLASTX nr result

ID: Coptis24_contig00034255 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034255
         (239 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38671.3| unnamed protein product [Vitis vinifera]              105   4e-21
ref|XP_002263933.1| PREDICTED: uncharacterized protein LOC100257...   105   4e-21
ref|XP_002510969.1| conserved hypothetical protein [Ricinus comm...   104   7e-21
gb|ABK26626.1| unknown [Picea sitchensis]                             100   9e-20
dbj|BAC84285.1| putative ATP/GTP nucleotide-binding protein [Ory...    99   5e-19

>emb|CBI38671.3| unnamed protein product [Vitis vinifera]
          Length = 659

 Score =  105 bits (262), Expect = 4e-21
 Identities = 50/66 (75%), Positives = 56/66 (84%)
 Frame = -1

Query: 239 QDQSKLTGNLKTIQDYLCSFESQGLTVVNISATTFPQTLDWLHSYLLQCIERGTSSAFTE 60
           QD+ KL  NLKTIQDYLCSF+SQGLTVVNISATTFPQTLDWLHSYLLQCIE+G SS  +E
Sbjct: 593 QDKDKLISNLKTIQDYLCSFKSQGLTVVNISATTFPQTLDWLHSYLLQCIEQGISSKSSE 652

Query: 59  FGKNPD 42
             +  +
Sbjct: 653 SSRQAE 658


>ref|XP_002263933.1| PREDICTED: uncharacterized protein LOC100257148 [Vitis vinifera]
          Length = 483

 Score =  105 bits (262), Expect = 4e-21
 Identities = 50/66 (75%), Positives = 56/66 (84%)
 Frame = -1

Query: 239 QDQSKLTGNLKTIQDYLCSFESQGLTVVNISATTFPQTLDWLHSYLLQCIERGTSSAFTE 60
           QD+ KL  NLKTIQDYLCSF+SQGLTVVNISATTFPQTLDWLHSYLLQCIE+G SS  +E
Sbjct: 417 QDKDKLISNLKTIQDYLCSFKSQGLTVVNISATTFPQTLDWLHSYLLQCIEQGISSKSSE 476

Query: 59  FGKNPD 42
             +  +
Sbjct: 477 SSRQAE 482


>ref|XP_002510969.1| conserved hypothetical protein [Ricinus communis]
           gi|223550084|gb|EEF51571.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 448

 Score =  104 bits (260), Expect = 7e-21
 Identities = 49/65 (75%), Positives = 55/65 (84%)
 Frame = -1

Query: 239 QDQSKLTGNLKTIQDYLCSFESQGLTVVNISATTFPQTLDWLHSYLLQCIERGTSSAFTE 60
           QD+ +L  NLKTIQ YLCSF+SQGLTVVNISATTFPQTLDWLH YLLQCIE+G SS  +E
Sbjct: 381 QDKDRLIANLKTIQGYLCSFKSQGLTVVNISATTFPQTLDWLHGYLLQCIEQGISSVSSE 440

Query: 59  FGKNP 45
            G+ P
Sbjct: 441 RGRQP 445


>gb|ABK26626.1| unknown [Picea sitchensis]
          Length = 391

 Score =  100 bits (250), Expect = 9e-20
 Identities = 47/60 (78%), Positives = 52/60 (86%)
 Frame = -1

Query: 239 QDQSKLTGNLKTIQDYLCSFESQGLTVVNISATTFPQTLDWLHSYLLQCIERGTSSAFTE 60
           +DQ  L  NLKTIQDYLCSFESQG+TVVNISATTFPQTLDWLH++LLQCIE G S + TE
Sbjct: 328 KDQKSLISNLKTIQDYLCSFESQGMTVVNISATTFPQTLDWLHNHLLQCIEEGCSQSNTE 387


>dbj|BAC84285.1| putative ATP/GTP nucleotide-binding protein [Oryza sativa Japonica
           Group]
          Length = 490

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 48/63 (76%), Positives = 52/63 (82%)
 Frame = -1

Query: 239 QDQSKLTGNLKTIQDYLCSFESQGLTVVNISATTFPQTLDWLHSYLLQCIERGTSSAFTE 60
           QD  KL  NLK IQDYLCSFESQGLTVV+ISA +FPQTLDWLHSYLLQCIERG  +A +E
Sbjct: 424 QDHRKLINNLKLIQDYLCSFESQGLTVVDISANSFPQTLDWLHSYLLQCIERGLLAACSE 483

Query: 59  FGK 51
             K
Sbjct: 484 SPK 486


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