BLASTX nr result

ID: Coptis24_contig00034238 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034238
         (509 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29897.3| unnamed protein product [Vitis vinifera]              214   6e-55
emb|CAN60311.1| hypothetical protein VITISV_002512 [Vitis vinifera]   181   5e-44
ref|XP_002984056.1| hypothetical protein SELMODRAFT_119501 [Sela...   155   3e-36
ref|XP_002960083.1| hypothetical protein SELMODRAFT_229823 [Sela...   155   4e-36
ref|XP_002984052.1| hypothetical protein SELMODRAFT_119124 [Sela...   154   7e-36

>emb|CBI29897.3| unnamed protein product [Vitis vinifera]
          Length = 479

 Score =  214 bits (544), Expect(2) = 6e-55
 Identities = 101/150 (67%), Positives = 125/150 (83%)
 Frame = +3

Query: 3   SWIGGFPGIKMDMETRIAEFRCPSTGVVSKLQLGALKSMGSQNYHNAAVAAFSVLGLDIG 182
           +WIG FPG+K+D E ++A  R P+ GVVS+L+LGAL  MG+ NY+NAAVAA SVLGLD+G
Sbjct: 256 AWIGAFPGVKVDKEEKVASLRVPAIGVVSELKLGALNVMGTHNYYNAAVAALSVLGLDMG 315

Query: 183 TDTDSIGSTVELLSPPPHRMQIVRRDERGVIWVDDSKATNVEATYTGIMGLRDQKSVVLL 362
            DT++I ST+E L  PPHRMQIV +D  GV W+DDSKATNVEATYTG++GL++QKSV+LL
Sbjct: 316 IDTEAISSTIEKLRVPPHRMQIVHKDSYGVTWIDDSKATNVEATYTGLLGLKEQKSVILL 375

Query: 363 GGLAKVLNAEGSTGFEQLVEQLEYHICVIT 452
           GGLAKV N++ S GFEQLVE L+YH CVIT
Sbjct: 376 GGLAKVSNSQESNGFEQLVEPLKYHRCVIT 405



 Score = 25.4 bits (54), Expect(2) = 6e-55
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = +2

Query: 458 MIQKTLQAAGLGIPCY 505
           +IQKTL   GL IPC+
Sbjct: 412 LIQKTLSDDGLSIPCF 427


>emb|CAN60311.1| hypothetical protein VITISV_002512 [Vitis vinifera]
          Length = 806

 Score =  181 bits (458), Expect(2) = 5e-44
 Identities = 84/125 (67%), Positives = 105/125 (84%)
 Frame = +3

Query: 3   SWIGGFPGIKMDMETRIAEFRCPSTGVVSKLQLGALKSMGSQNYHNAAVAAFSVLGLDIG 182
           +WIG FPG+K+D E ++A  R P+ GVVS+L+LGAL  MG+ NY+NAAVAA SVLGLD+G
Sbjct: 357 AWIGAFPGVKVDKEEKVASLRVPAIGVVSELKLGALNVMGTHNYYNAAVAALSVLGLDMG 416

Query: 183 TDTDSIGSTVELLSPPPHRMQIVRRDERGVIWVDDSKATNVEATYTGIMGLRDQKSVVLL 362
            DT++I ST+E L  PPHRMQIV +D  GV W+DDSKATNVEATYTG++GL++QKSV+LL
Sbjct: 417 IDTEAISSTIEKLRVPPHRMQIVHKDSYGVTWIDDSKATNVEATYTGLLGLKEQKSVILL 476

Query: 363 GGLAK 377
           GGLAK
Sbjct: 477 GGLAK 481



 Score = 21.9 bits (45), Expect(2) = 5e-44
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +2

Query: 458 MIQKTLQAAGLGIPCY 505
           + +KTL   GL IPC+
Sbjct: 479 LAKKTLSDBGLSIPCF 494


>ref|XP_002984056.1| hypothetical protein SELMODRAFT_119501 [Selaginella moellendorffii]
           gi|300148408|gb|EFJ15068.1| hypothetical protein
           SELMODRAFT_119501 [Selaginella moellendorffii]
          Length = 492

 Score =  155 bits (392), Expect = 3e-36
 Identities = 73/150 (48%), Positives = 107/150 (71%)
 Frame = +3

Query: 3   SWIGGFPGIKMDMETRIAEFRCPSTGVVSKLQLGALKSMGSQNYHNAAVAAFSVLGLDIG 182
           +W+G  PGI++D + R A    P+T   ++L L  LK++GS N  NAA A+   L LD+G
Sbjct: 265 AWLGALPGIQLDSQARRAVVVVPTTKAEARLYLSGLKAVGSHNAQNAATASLLSLALDVG 324

Query: 183 TDTDSIGSTVELLSPPPHRMQIVRRDERGVIWVDDSKATNVEATYTGIMGLRDQKSVVLL 362
            D   + + +  L+P PHRMQIV +D++GV+W++DSKATNV+A YTGI GL D+K+V+LL
Sbjct: 325 VDEHKLQAAIGQLTPLPHRMQIVGQDKKGVLWINDSKATNVDAAYTGIKGLADRKAVILL 384

Query: 363 GGLAKVLNAEGSTGFEQLVEQLEYHICVIT 452
           GGLAKVL+ +GS GF++L + L+ H  ++T
Sbjct: 385 GGLAKVLDQDGSLGFKKLSDLLQNHRAIVT 414


>ref|XP_002960083.1| hypothetical protein SELMODRAFT_229823 [Selaginella moellendorffii]
           gi|300171022|gb|EFJ37622.1| hypothetical protein
           SELMODRAFT_229823 [Selaginella moellendorffii]
          Length = 492

 Score =  155 bits (391), Expect = 4e-36
 Identities = 72/150 (48%), Positives = 107/150 (71%)
 Frame = +3

Query: 3   SWIGGFPGIKMDMETRIAEFRCPSTGVVSKLQLGALKSMGSQNYHNAAVAAFSVLGLDIG 182
           +W+G  PG+++D + R A    P+T   ++L L  LK++GS N  NAA A+   L LD+G
Sbjct: 265 AWLGALPGVQLDSQARRAVVVVPTTKAEARLYLSGLKAVGSHNAQNAATASLLSLALDVG 324

Query: 183 TDTDSIGSTVELLSPPPHRMQIVRRDERGVIWVDDSKATNVEATYTGIMGLRDQKSVVLL 362
            D   + + +  L+P PHRMQIV +D++GV+W++DSKATNV+A YTGI GL D+K+V+LL
Sbjct: 325 VDEHKLQAAIGQLTPLPHRMQIVGQDKKGVLWINDSKATNVDAAYTGIKGLADRKAVILL 384

Query: 363 GGLAKVLNAEGSTGFEQLVEQLEYHICVIT 452
           GGLAKVL+ +GS GF++L + L+ H  ++T
Sbjct: 385 GGLAKVLDEDGSLGFKKLSDLLQNHRAIVT 414


>ref|XP_002984052.1| hypothetical protein SELMODRAFT_119124 [Selaginella moellendorffii]
           gi|300148404|gb|EFJ15064.1| hypothetical protein
           SELMODRAFT_119124 [Selaginella moellendorffii]
          Length = 492

 Score =  154 bits (389), Expect = 7e-36
 Identities = 72/150 (48%), Positives = 107/150 (71%)
 Frame = +3

Query: 3   SWIGGFPGIKMDMETRIAEFRCPSTGVVSKLQLGALKSMGSQNYHNAAVAAFSVLGLDIG 182
           +W+G  PG+++D + R A    P+T   ++L L  LK++GS N  NAA A+   L LD+G
Sbjct: 265 AWLGALPGVQLDNQARRAVVVVPTTKAEARLYLSGLKAVGSHNAQNAATASLLSLALDLG 324

Query: 183 TDTDSIGSTVELLSPPPHRMQIVRRDERGVIWVDDSKATNVEATYTGIMGLRDQKSVVLL 362
            D   + + +  L+P PHRMQIV +D++GV+W++DSKATNV+A YTGI GL D+K+V+LL
Sbjct: 325 VDEHKLQAAIGQLTPLPHRMQIVGQDKKGVLWINDSKATNVDAAYTGIKGLADRKAVILL 384

Query: 363 GGLAKVLNAEGSTGFEQLVEQLEYHICVIT 452
           GGLAKVL+ +GS GF++L + L+ H  ++T
Sbjct: 385 GGLAKVLDQDGSLGFKKLSDLLQNHRAIVT 414


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