BLASTX nr result

ID: Coptis24_contig00034237 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034237
         (407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25254.3| unnamed protein product [Vitis vinifera]              117   1e-24
ref|XP_002271770.1| PREDICTED: trimethylguanosine synthase [Viti...   117   1e-24
ref|NP_174343.3| S-adenosyl-L-methionine-dependent methyltransfe...    98   8e-19
ref|NP_001154386.2| S-adenosyl-L-methionine-dependent methyltran...    98   8e-19
ref|XP_002467741.1| hypothetical protein SORBIDRAFT_01g033250 [S...    94   1e-17

>emb|CBI25254.3| unnamed protein product [Vitis vinifera]
          Length = 310

 Score =  117 bits (292), Expect = 1e-24
 Identities = 52/62 (83%), Positives = 58/62 (93%)
 Frame = +2

Query: 221 KQGVSPLVEKYWLQRYNLFSLYDEGIKMDEEGWFSVTPEEIAIKHAERSGSGTVIDCFTG 400
           ++G+SPLVEKYW QRYNLFS YD+GIKMDEEGWFSVTPEEIAI+HAERSG G VIDCF+G
Sbjct: 96  EKGISPLVEKYWRQRYNLFSSYDDGIKMDEEGWFSVTPEEIAIRHAERSGGGCVIDCFSG 155

Query: 401 VG 406
           VG
Sbjct: 156 VG 157


>ref|XP_002271770.1| PREDICTED: trimethylguanosine synthase [Vitis vinifera]
          Length = 248

 Score =  117 bits (292), Expect = 1e-24
 Identities = 52/62 (83%), Positives = 58/62 (93%)
 Frame = +2

Query: 221 KQGVSPLVEKYWLQRYNLFSLYDEGIKMDEEGWFSVTPEEIAIKHAERSGSGTVIDCFTG 400
           ++G+SPLVEKYW QRYNLFS YD+GIKMDEEGWFSVTPEEIAI+HAERSG G VIDCF+G
Sbjct: 34  EKGISPLVEKYWRQRYNLFSSYDDGIKMDEEGWFSVTPEEIAIRHAERSGGGCVIDCFSG 93

Query: 401 VG 406
           VG
Sbjct: 94  VG 95


>ref|NP_174343.3| S-adenosyl-L-methionine-dependent methyltransferase
           domain-containing protein [Arabidopsis thaliana]
           gi|6634778|gb|AAF19758.1|AC009917_17 Contains similarity
           to gi|629253 lmbW protein from Streptomyces lincolnensis
           [Arabidopsis thaliana] gi|332193121|gb|AEE31242.1|
           S-adenosyl-L-methionine-dependent methyltransferase
           domain-containing protein [Arabidopsis thaliana]
          Length = 455

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 44/68 (64%), Positives = 56/68 (82%), Gaps = 1/68 (1%)
 Frame = +2

Query: 206 QSLLAKQ-GVSPLVEKYWLQRYNLFSLYDEGIKMDEEGWFSVTPEEIAIKHAERSGSGTV 382
           +SL+ K+ G +P + +YW+QRY+LFS YD+GI+MDEEGW+SVTPEEIAIK AER     V
Sbjct: 6   ESLIEKEHGTNPKISRYWIQRYDLFSKYDQGIEMDEEGWYSVTPEEIAIKQAERCRGKVV 65

Query: 383 IDCFTGVG 406
           IDCF+GVG
Sbjct: 66  IDCFSGVG 73



 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 39/55 (70%), Positives = 47/55 (85%)
 Frame = +2

Query: 242 VEKYWLQRYNLFSLYDEGIKMDEEGWFSVTPEEIAIKHAERSGSGTVIDCFTGVG 406
           + KYW+QRY+LFS YD+GI+MDEEGW+SVTPEEIAIK A+R     VIDCF+GVG
Sbjct: 253 ITKYWIQRYDLFSRYDQGIEMDEEGWYSVTPEEIAIKQAQRYRGKVVIDCFSGVG 307


>ref|NP_001154386.2| S-adenosyl-L-methionine-dependent methyltransferase
           domain-containing protein [Arabidopsis thaliana]
           gi|332193122|gb|AEE31243.1|
           S-adenosyl-L-methionine-dependent methyltransferase
           domain-containing protein [Arabidopsis thaliana]
          Length = 221

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 44/68 (64%), Positives = 56/68 (82%), Gaps = 1/68 (1%)
 Frame = +2

Query: 206 QSLLAKQ-GVSPLVEKYWLQRYNLFSLYDEGIKMDEEGWFSVTPEEIAIKHAERSGSGTV 382
           +SL+ K+ G +P + +YW+QRY+LFS YD+GI+MDEEGW+SVTPEEIAIK AER     V
Sbjct: 6   ESLIEKEHGTNPKISRYWIQRYDLFSKYDQGIEMDEEGWYSVTPEEIAIKQAERCRGKVV 65

Query: 383 IDCFTGVG 406
           IDCF+GVG
Sbjct: 66  IDCFSGVG 73


>ref|XP_002467741.1| hypothetical protein SORBIDRAFT_01g033250 [Sorghum bicolor]
           gi|241921595|gb|EER94739.1| hypothetical protein
           SORBIDRAFT_01g033250 [Sorghum bicolor]
          Length = 690

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 42/59 (71%), Positives = 48/59 (81%)
 Frame = +2

Query: 230 VSPLVEKYWLQRYNLFSLYDEGIKMDEEGWFSVTPEEIAIKHAERSGSGTVIDCFTGVG 406
           +S  + KYW QRY+LFSL+D GIKMDEEGWFSVTPE IA  HA R G+G +IDCFTGVG
Sbjct: 483 ISNDIIKYWTQRYSLFSLFDRGIKMDEEGWFSVTPEPIAKHHASRVGAGVIIDCFTGVG 541


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