BLASTX nr result

ID: Coptis24_contig00034233 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034233
         (286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510867.1| hypothetical protein RCOM_1497860 [Ricinus c...    64   2e-08
ref|XP_002321872.1| predicted protein [Populus trichocarpa] gi|2...    62   4e-08
ref|XP_002318849.1| predicted protein [Populus trichocarpa] gi|2...    60   1e-07

>ref|XP_002510867.1| hypothetical protein RCOM_1497860 [Ricinus communis]
           gi|223549982|gb|EEF51469.1| hypothetical protein
           RCOM_1497860 [Ricinus communis]
          Length = 746

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 28/42 (66%), Positives = 34/42 (80%)
 Frame = -2

Query: 168 DEIRYVSDILTCTGIKKGTLVSFTRWYSPSHPLDPSLFHHLE 43
           +E  Y+S IL  TGI K T VSFTRW+SPSHPLDPS+F++LE
Sbjct: 551 EEYEYISRILRRTGIDKDTQVSFTRWFSPSHPLDPSIFYYLE 592


>ref|XP_002321872.1| predicted protein [Populus trichocarpa] gi|222868868|gb|EEF05999.1|
           predicted protein [Populus trichocarpa]
          Length = 736

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 28/43 (65%), Positives = 34/43 (79%)
 Frame = -2

Query: 168 DEIRYVSDILTCTGIKKGTLVSFTRWYSPSHPLDPSLFHHLEN 40
           +E  Y+S IL  TGI K T VSFTRW+SPSHPLDPS F++LE+
Sbjct: 553 EEYEYISRILKRTGIDKDTPVSFTRWFSPSHPLDPSTFYYLEH 595


>ref|XP_002318849.1| predicted protein [Populus trichocarpa] gi|222859522|gb|EEE97069.1|
           predicted protein [Populus trichocarpa]
          Length = 733

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 26/44 (59%), Positives = 35/44 (79%)
 Frame = -2

Query: 171 ADEIRYVSDILTCTGIKKGTLVSFTRWYSPSHPLDPSLFHHLEN 40
           A+E  Y++ IL  TG+ K T VSFTRW+SPSHPL+PS F++LE+
Sbjct: 550 AEEYEYITRILKRTGVDKDTPVSFTRWFSPSHPLNPSTFYYLEH 593