BLASTX nr result

ID: Coptis24_contig00034230 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034230
         (519 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002336153.1| predicted protein [Populus trichocarpa] gi|2...   212   3e-53
ref|XP_002516835.1| inosine-uridine preferring nucleoside hydrol...   201   5e-50
ref|XP_002336154.1| predicted protein [Populus trichocarpa] gi|2...   201   5e-50
ref|XP_002311814.1| predicted protein [Populus trichocarpa] gi|2...   201   5e-50
ref|XP_002264143.2| PREDICTED: uncharacterized protein LOC100245...   193   1e-47

>ref|XP_002336153.1| predicted protein [Populus trichocarpa] gi|222874439|gb|EEF11570.1|
           predicted protein [Populus trichocarpa]
          Length = 203

 Score =  212 bits (539), Expect = 3e-53
 Identities = 108/173 (62%), Positives = 135/173 (78%), Gaps = 2/173 (1%)
 Frame = +2

Query: 5   DKDEGNVFTVPSNKYAELNMFLDPLAAKTVLESGLDITLIPLSIQRKTSSFPQMIESLKF 184
           D D+GNV T+ SN+Y ELNMFLDPLAAKTV ES LDITLIPL +QR+ SSFP+++ SL+ 
Sbjct: 17  DTDKGNVLTIDSNEYTELNMFLDPLAAKTVFESSLDITLIPLGVQRRVSSFPKILRSLRS 76

Query: 185 KGK-TPEAMFARQLLSRLYRLQKKHHRYHHMDIFLGEILGAVMLGGDY-ELKPSSQVKPL 358
           K K TPE +F R+LLSRLYRL++ HHRYHHMD FLGEILGAV+L GD+ +L+P    KP+
Sbjct: 77  KTKRTPEELFVRRLLSRLYRLKETHHRYHHMDTFLGEILGAVVLAGDHSKLEPIWLAKPI 136

Query: 359 TVLATGNIMTDGQIFIDEQHGRAVKIIESVNPMAYYGHFAELFGSKVQSAVIG 517
           T+LA G+   DGQ+ IDE+ G+ VKI+ESV P A+Y  FA+    K QSAV+G
Sbjct: 137 TILAEGDESKDGQVVIDEKQGKFVKILESVEPEAHYDLFAKQLTVKKQSAVVG 189


>ref|XP_002516835.1| inosine-uridine preferring nucleoside hydrolase, putative [Ricinus
            communis] gi|223543923|gb|EEF45449.1| inosine-uridine
            preferring nucleoside hydrolase, putative [Ricinus
            communis]
          Length = 885

 Score =  201 bits (511), Expect = 5e-50
 Identities = 101/171 (59%), Positives = 129/171 (75%), Gaps = 2/171 (1%)
 Frame = +2

Query: 11   DEGNVFTVPSNKYAELNMFLDPLAAKTVLESGLDITLIPLSIQRKTSSFPQMIESLKFKG 190
            D+GNV T  SN+Y E+N++LDPLAAKTV ES LDITLIPL  QRK SSF ++++SL    
Sbjct: 699  DKGNVLTSHSNEYTEMNIYLDPLAAKTVFESSLDITLIPLEAQRKVSSFSKILQSLSKTN 758

Query: 191  KTPEAMFARQLLSRLYRLQKKHHRYHHMDIFLGEILGAVMLGGDYE--LKPSSQVKPLTV 364
            KTPEA+FAR+LLSRLYRL + HHRYHHMD FLGEILGAV LGG ++  L    ++K + V
Sbjct: 759  KTPEALFARRLLSRLYRLHQAHHRYHHMDTFLGEILGAVSLGGGHDSLLNSILKIKRIKV 818

Query: 365  LATGNIMTDGQIFIDEQHGRAVKIIESVNPMAYYGHFAELFGSKVQSAVIG 517
            LA G    +G+I +DE+ G+ V++++SV+P  YY HFA   G K+QSAVIG
Sbjct: 819  LAEGVESREGEIVVDEKQGKLVRLLDSVDPTVYYNHFAWQLGVKMQSAVIG 869


>ref|XP_002336154.1| predicted protein [Populus trichocarpa] gi|222874440|gb|EEF11571.1|
            predicted protein [Populus trichocarpa]
          Length = 872

 Score =  201 bits (511), Expect = 5e-50
 Identities = 105/172 (61%), Positives = 130/172 (75%), Gaps = 1/172 (0%)
 Frame = +2

Query: 5    DKDEGNVFTVPSNKYAELNMFLDPLAAKTVLESGLDITLIPLSIQRKTSSFPQMIESLKF 184
            D D+GNV T+ SN+Y ELNMFLDPLAAKTV ES LDITLIPL +QR+ SSFP+++E L+ 
Sbjct: 677  DTDKGNVLTIDSNEYTELNMFLDPLAAKTVFESSLDITLIPLGVQRRVSSFPEILERLRK 736

Query: 185  KGKTPEAMFARQLLSRLYRLQKKHHRYHHMDIFLGEILGAVMLGGDY-ELKPSSQVKPLT 361
               TPEA+FA++LLSRLY L++ H RY  MD FLGEILGAV+L G++ +L P+ +VKP+ 
Sbjct: 737  INTTPEALFAQRLLSRLYHLKETHRRYQQMDTFLGEILGAVVLAGNFSKLDPTFRVKPIK 796

Query: 362  VLATGNIMTDGQIFIDEQHGRAVKIIESVNPMAYYGHFAELFGSKVQSAVIG 517
            VLA G    DG+I IDE+ GR VKI+E V+  AYY  F E   SK QSAVIG
Sbjct: 797  VLAEGVESEDGRIVIDEKQGRLVKIVEKVDLGAYYDLFTEQLRSKEQSAVIG 848


>ref|XP_002311814.1| predicted protein [Populus trichocarpa] gi|222851634|gb|EEE89181.1|
            predicted protein [Populus trichocarpa]
          Length = 921

 Score =  201 bits (511), Expect = 5e-50
 Identities = 105/172 (61%), Positives = 130/172 (75%), Gaps = 1/172 (0%)
 Frame = +2

Query: 5    DKDEGNVFTVPSNKYAELNMFLDPLAAKTVLESGLDITLIPLSIQRKTSSFPQMIESLKF 184
            D D+GNV T+ SN+Y ELNMFLDPLAAKTV ES LDITLIPL +QR+ SSFP+++E L+ 
Sbjct: 730  DTDKGNVLTIDSNEYTELNMFLDPLAAKTVFESSLDITLIPLGVQRRVSSFPEILERLRK 789

Query: 185  KGKTPEAMFARQLLSRLYRLQKKHHRYHHMDIFLGEILGAVMLGGDY-ELKPSSQVKPLT 361
               TPEA+FA++LLSRLY L++ H RY  MD FLGEILGAV+L G++ +L P+ +VKP+ 
Sbjct: 790  INTTPEALFAQRLLSRLYHLKETHRRYQQMDTFLGEILGAVVLAGNFSKLDPTFRVKPIK 849

Query: 362  VLATGNIMTDGQIFIDEQHGRAVKIIESVNPMAYYGHFAELFGSKVQSAVIG 517
            VLA G    DG+I IDE+ GR VKI+E V+  AYY  F E   SK QSAVIG
Sbjct: 850  VLAEGVESEDGRIVIDEKQGRLVKIVEKVDLGAYYDLFTEQLRSKEQSAVIG 901


>ref|XP_002264143.2| PREDICTED: uncharacterized protein LOC100245166 [Vitis vinifera]
          Length = 909

 Score =  193 bits (490), Expect = 1e-47
 Identities = 97/172 (56%), Positives = 125/172 (72%), Gaps = 1/172 (0%)
 Frame = +2

Query: 5    DKDEGNVFTVPSNKYAELNMFLDPLAAKTVLESGLDITLIPLSIQRKTSSFPQMIESLKF 184
            D   GN+FTVPSN++AE NMFLDPLA K V++S L++TLIPL +QR  SSF  +++ L+ 
Sbjct: 690  DNKTGNLFTVPSNEFAEFNMFLDPLAVKVVMDSKLNVTLIPLGVQRSVSSFNHVLQRLEH 749

Query: 185  KGKTPEAMFARQLLSRLYRLQKKHHRYHHMDIFLGEILGAVMLGGDYE-LKPSSQVKPLT 361
            K +TPEA F + LLSRL +LQ+K  RYHHMD FLGEILGAV+L GD   L  + Q  PL 
Sbjct: 750  KNQTPEAAFTQNLLSRLSQLQQKSDRYHHMDTFLGEILGAVVLAGDDPLLNQAFQHMPLK 809

Query: 362  VLATGNIMTDGQIFIDEQHGRAVKIIESVNPMAYYGHFAELFGSKVQSAVIG 517
            +LA G++  DGQI IDE+ GR VK++ SVN   YY HFA++  ++ QSA IG
Sbjct: 810  ILANGDVKNDGQIVIDEKQGRLVKVLRSVNTTEYYDHFADVLNNQSQSARIG 861


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