BLASTX nr result

ID: Coptis24_contig00034228 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034228
         (593 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27808.3| unnamed protein product [Vitis vinifera]              309   2e-82
gb|ABK93352.1| unknown [Populus trichocarpa]                          304   7e-81
ref|XP_002324164.1| predicted protein [Populus trichocarpa] gi|2...   302   3e-80
ref|XP_003546510.1| PREDICTED: uncharacterized protein LOC100810...   296   2e-78
ref|XP_003533784.1| PREDICTED: uncharacterized protein LOC100795...   289   2e-76

>emb|CBI27808.3| unnamed protein product [Vitis vinifera]
          Length = 353

 Score =  309 bits (792), Expect = 2e-82
 Identities = 147/193 (76%), Positives = 171/193 (88%)
 Frame = -2

Query: 580 YAVVAVGAPWFFVAIQGLVASLICSCNVALLIITGIFQQYLVYEVQKVRLQGYYIFSQKL 401
           YA++AV APW F  I+ L  SL+CSC+VA L+ITG FQQYLVY+VQK+RLQGYY+FSQKL
Sbjct: 51  YAILAVAAPWMFHPIKSLGPSLLCSCDVAFLMITGAFQQYLVYQVQKIRLQGYYMFSQKL 110

Query: 400 KHIIRLPFATIAYGAGIMLLVMVWKPHFSILSLSALLRVVMVAEVLCAGSFMSIYIGCIH 221
           KHI+RLPFAT AYG   MLLVMVWKPH SILS+S +LR++M+ E +CA SFMS+YIG ++
Sbjct: 111 KHIVRLPFATTAYGTAAMLLVMVWKPHISILSISTILRIIMLVEAVCAASFMSVYIGYVY 170

Query: 220 QYNSLNSQPDVLKSLYSALQPSSDLEELRYHDGGRLSDQQMALLQYQRENIHYLSEEILR 41
           QYNSLNSQPDVLKSLYS LQPSS LE LRY++GGRLSDQQMALLQYQREN+H+LSEEILR
Sbjct: 171 QYNSLNSQPDVLKSLYSPLQPSSSLEGLRYYEGGRLSDQQMALLQYQRENLHFLSEEILR 230

Query: 40  LQECLSKYERSDD 2
           LQECLSKYERS+D
Sbjct: 231 LQECLSKYERSND 243


>gb|ABK93352.1| unknown [Populus trichocarpa]
          Length = 356

 Score =  304 bits (779), Expect = 7e-81
 Identities = 147/194 (75%), Positives = 168/194 (86%)
 Frame = -2

Query: 583 GYAVVAVGAPWFFVAIQGLVASLICSCNVALLIITGIFQQYLVYEVQKVRLQGYYIFSQK 404
           GYAV+A GAP+ F  I+ LV SL+CSC+V LLI+TGIFQQY V +VQK+RLQGYY FSQK
Sbjct: 50  GYAVLAAGAPYIFRPIKHLVPSLLCSCDVVLLILTGIFQQYFVSQVQKIRLQGYYSFSQK 109

Query: 403 LKHIIRLPFATIAYGAGIMLLVMVWKPHFSILSLSALLRVVMVAEVLCAGSFMSIYIGCI 224
           LKHI+RLPFA  AYG   MLLVMVWKPH S+LS+S LLR+ M+AE +CA SFMS+YIG +
Sbjct: 110 LKHIVRLPFAITAYGTATMLLVMVWKPHISVLSVSTLLRINMLAEAICAASFMSVYIGYL 169

Query: 223 HQYNSLNSQPDVLKSLYSALQPSSDLEELRYHDGGRLSDQQMALLQYQRENIHYLSEEIL 44
           HQYNSLNS+PD+LKSLYS LQ SS LE LRYHDG RLSDQQMALLQYQREN+H+LSEE+L
Sbjct: 170 HQYNSLNSEPDILKSLYSPLQHSSPLEGLRYHDGSRLSDQQMALLQYQRENLHFLSEEVL 229

Query: 43  RLQECLSKYERSDD 2
           RLQECLSKYERSDD
Sbjct: 230 RLQECLSKYERSDD 243


>ref|XP_002324164.1| predicted protein [Populus trichocarpa] gi|222865598|gb|EEF02729.1|
           predicted protein [Populus trichocarpa]
          Length = 356

 Score =  302 bits (773), Expect = 3e-80
 Identities = 146/193 (75%), Positives = 167/193 (86%)
 Frame = -2

Query: 580 YAVVAVGAPWFFVAIQGLVASLICSCNVALLIITGIFQQYLVYEVQKVRLQGYYIFSQKL 401
           YAV+A GAP+ F  I+ LV SL+CSC+V LLI+TGIFQQY V +VQK+RLQGYY FSQKL
Sbjct: 51  YAVLAAGAPYIFRPIKHLVPSLLCSCDVVLLILTGIFQQYFVSQVQKIRLQGYYSFSQKL 110

Query: 400 KHIIRLPFATIAYGAGIMLLVMVWKPHFSILSLSALLRVVMVAEVLCAGSFMSIYIGCIH 221
           KHI+RLPFA  AYG   MLLVMVWKPH S+LS+S LLR+ M+AE +CA SFMS+YIG +H
Sbjct: 111 KHIVRLPFAITAYGTATMLLVMVWKPHISVLSVSTLLRINMLAEAICAASFMSVYIGYLH 170

Query: 220 QYNSLNSQPDVLKSLYSALQPSSDLEELRYHDGGRLSDQQMALLQYQRENIHYLSEEILR 41
           QYNSLNS+PD+LKSLYS LQ SS LE LRYHDG RLSDQQMALLQYQREN+H+LSEE+LR
Sbjct: 171 QYNSLNSEPDILKSLYSPLQHSSPLEGLRYHDGSRLSDQQMALLQYQRENLHFLSEEVLR 230

Query: 40  LQECLSKYERSDD 2
           LQECLSKYERSDD
Sbjct: 231 LQECLSKYERSDD 243


>ref|XP_003546510.1| PREDICTED: uncharacterized protein LOC100810116 [Glycine max]
          Length = 356

 Score =  296 bits (758), Expect = 2e-78
 Identities = 141/194 (72%), Positives = 168/194 (86%)
 Frame = -2

Query: 583 GYAVVAVGAPWFFVAIQGLVASLICSCNVALLIITGIFQQYLVYEVQKVRLQGYYIFSQK 404
           GYA +A+GA W F  ++GL++ ++CSC+V LL++TGIFQQYLVY+VQK+RLQGYY FSQK
Sbjct: 50  GYATLAIGAHWIFRPVRGLISPVLCSCDVLLLLLTGIFQQYLVYQVQKIRLQGYYSFSQK 109

Query: 403 LKHIIRLPFATIAYGAGIMLLVMVWKPHFSILSLSALLRVVMVAEVLCAGSFMSIYIGCI 224
           LK I+R+PFA  AYG   MLLV+VWKP+   LS+SA+LR++MV E +CAG FMS++IG I
Sbjct: 110 LKFIVRIPFAITAYGTAAMLLVIVWKPYTGFLSISAILRIIMVVEAVCAGCFMSLFIGYI 169

Query: 223 HQYNSLNSQPDVLKSLYSALQPSSDLEELRYHDGGRLSDQQMALLQYQRENIHYLSEEIL 44
           HQYNSLNS PDVLKSLYS LQPSS LE LRYHD GRLSDQQMALLQYQREN+H+LSEEIL
Sbjct: 170 HQYNSLNSHPDVLKSLYSPLQPSSSLEGLRYHD-GRLSDQQMALLQYQRENLHFLSEEIL 228

Query: 43  RLQECLSKYERSDD 2
           RLQECLSKYER+DD
Sbjct: 229 RLQECLSKYERTDD 242


>ref|XP_003533784.1| PREDICTED: uncharacterized protein LOC100795952 [Glycine max]
          Length = 356

 Score =  289 bits (740), Expect = 2e-76
 Identities = 140/194 (72%), Positives = 165/194 (85%)
 Frame = -2

Query: 583 GYAVVAVGAPWFFVAIQGLVASLICSCNVALLIITGIFQQYLVYEVQKVRLQGYYIFSQK 404
           GYA +A+GA W F  +QGL++ ++CSC+V LL++TGIFQQYLVY+VQK+RLQGYY FSQK
Sbjct: 50  GYATLAIGAHWIFRPVQGLISPVLCSCDVLLLLLTGIFQQYLVYQVQKIRLQGYYSFSQK 109

Query: 403 LKHIIRLPFATIAYGAGIMLLVMVWKPHFSILSLSALLRVVMVAEVLCAGSFMSIYIGCI 224
           LK I+R+PFA  AYG   MLLV+VWKP+   LS+SA+LR++MV E + A  FMS+YIG I
Sbjct: 110 LKFIVRIPFAITAYGTAAMLLVIVWKPYTGFLSISAILRIIMVVEAVSAVCFMSLYIGYI 169

Query: 223 HQYNSLNSQPDVLKSLYSALQPSSDLEELRYHDGGRLSDQQMALLQYQRENIHYLSEEIL 44
           HQYNSLNS PDVLKSLYS LQPSS LE LRYHD GRLSDQQMALLQYQREN+H+LSEEIL
Sbjct: 170 HQYNSLNSHPDVLKSLYSPLQPSSSLEGLRYHD-GRLSDQQMALLQYQRENLHFLSEEIL 228

Query: 43  RLQECLSKYERSDD 2
           RLQECLSKYE +DD
Sbjct: 229 RLQECLSKYEGTDD 242


Top