BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034209
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_568185.1| Mitochondrial transcription termination factor ...    55   8e-06

>ref|NP_568185.1| Mitochondrial transcription termination factor family protein
           [Arabidopsis thaliana]
           gi|13878065|gb|AAK44110.1|AF370295_1 unknown protein
           [Arabidopsis thaliana] gi|6562304|emb|CAB62602.1|
           putative protein [Arabidopsis thaliana]
           gi|10176724|dbj|BAB09954.1| unnamed protein product
           [Arabidopsis thaliana] gi|17104655|gb|AAL34216.1|
           unknown protein [Arabidopsis thaliana]
           gi|21592327|gb|AAM64278.1| unknown [Arabidopsis
           thaliana] gi|332003836|gb|AED91219.1| Mitochondrial
           transcription termination factor family protein
           [Arabidopsis thaliana]
          Length = 405

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 32/71 (45%), Positives = 43/71 (60%), Gaps = 9/71 (12%)
 Frame = +2

Query: 11  QQPDLL*FSMQKRI---------LKSNGLIDKDRRLDNLLIMLKKDFLEKFVTKYEAEFP 163
           Q P +L FS++KRI         L SNGL+ +D  L +LL+ ++K FLEK V KYE E P
Sbjct: 334 QCPVVLFFSLEKRIIPRCSVTKVLVSNGLVKEDWSLTSLLVPVEKVFLEKLVIKYEEELP 393

Query: 164 EVLKAYKGMGK 196
           E++  Y G  K
Sbjct: 394 ELMNLYLGCTK 404