BLASTX nr result

ID: Coptis24_contig00034200 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034200
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266979.1| PREDICTED: chlorophyll(ide) b reductase NOL,...   173   1e-41
ref|XP_003546651.1| PREDICTED: chlorophyll(ide) b reductase NOL,...   166   1e-39
ref|XP_004140918.1| PREDICTED: chlorophyll(ide) b reductase NOL,...   166   2e-39
gb|AEO19897.1| chlorophyll(ide) b reductase [Pyrus x bretschneid...   158   4e-37
ref|XP_002871122.1| short-chain dehydrogenase/reductase family p...   157   1e-36

>ref|XP_002266979.1| PREDICTED: chlorophyll(ide) b reductase NOL, chloroplastic [Vitis
           vinifera] gi|297738201|emb|CBI27402.3| unnamed protein
           product [Vitis vinifera]
          Length = 345

 Score =  173 bits (438), Expect = 1e-41
 Identities = 87/95 (91%), Positives = 91/95 (95%)
 Frame = -2

Query: 299 QDVKKVVVHNLSPGMVTTDLLMSGATTKQAKFFINVLAEPADVVAECLIPNIRSILSNGS 120
           QDVK VVVHNLSPGMVTTDLLMSGATTKQAKFFINVLAEPA+VVAE L+PNIRSI  NGS
Sbjct: 251 QDVKNVVVHNLSPGMVTTDLLMSGATTKQAKFFINVLAEPAEVVAEYLVPNIRSIPVNGS 310

Query: 119 TKPTYLRFLTGLKAYSQIFSRFAFGARRNRYVLED 15
           TKPTY+RFLTGLKAYSQIFSRFAFGARRNRY+LED
Sbjct: 311 TKPTYIRFLTGLKAYSQIFSRFAFGARRNRYLLED 345


>ref|XP_003546651.1| PREDICTED: chlorophyll(ide) b reductase NOL, chloroplastic-like
           [Glycine max]
          Length = 349

 Score =  166 bits (421), Expect = 1e-39
 Identities = 82/95 (86%), Positives = 88/95 (92%)
 Frame = -2

Query: 299 QDVKKVVVHNLSPGMVTTDLLMSGATTKQAKFFINVLAEPADVVAECLIPNIRSILSNGS 120
           QDVK VVVHNLSPGMVTTDLLMSG  TKQAKFFINVLAEPA+VVAE L+PNIRS+ +NGS
Sbjct: 255 QDVKNVVVHNLSPGMVTTDLLMSGVNTKQAKFFINVLAEPAEVVAEYLVPNIRSVPANGS 314

Query: 119 TKPTYLRFLTGLKAYSQIFSRFAFGARRNRYVLED 15
            KPTY+RFLTGLKAYSQIFSR AFGARRNRY+LED
Sbjct: 315 MKPTYIRFLTGLKAYSQIFSRLAFGARRNRYILED 349


>ref|XP_004140918.1| PREDICTED: chlorophyll(ide) b reductase NOL, chloroplastic-like
           [Cucumis sativus] gi|449494121|ref|XP_004159455.1|
           PREDICTED: chlorophyll(ide) b reductase NOL,
           chloroplastic-like [Cucumis sativus]
          Length = 352

 Score =  166 bits (419), Expect = 2e-39
 Identities = 83/95 (87%), Positives = 88/95 (92%)
 Frame = -2

Query: 299 QDVKKVVVHNLSPGMVTTDLLMSGATTKQAKFFINVLAEPADVVAECLIPNIRSILSNGS 120
           QDVK VVVHNLSPGMVTTDLLMSGA TKQAKFFINVLAEP +VVAE L+PNIRSI +NGS
Sbjct: 258 QDVKNVVVHNLSPGMVTTDLLMSGADTKQAKFFINVLAEPPEVVAEYLVPNIRSIPTNGS 317

Query: 119 TKPTYLRFLTGLKAYSQIFSRFAFGARRNRYVLED 15
           T+PTY+RFLTGLKAYSQIFSR AFGARRNRY LED
Sbjct: 318 TRPTYIRFLTGLKAYSQIFSRLAFGARRNRYFLED 352


>gb|AEO19897.1| chlorophyll(ide) b reductase [Pyrus x bretschneideri]
          Length = 178

 Score =  158 bits (400), Expect = 4e-37
 Identities = 78/90 (86%), Positives = 84/90 (93%)
 Frame = -2

Query: 299 QDVKKVVVHNLSPGMVTTDLLMSGATTKQAKFFINVLAEPADVVAECLIPNIRSILSNGS 120
           QDVK V VHNLSPGMVTTDLLMSGATTKQAKFFINVLAEP +VVAE L+PNIRS+ +NGS
Sbjct: 89  QDVKNVAVHNLSPGMVTTDLLMSGATTKQAKFFINVLAEPPEVVAEYLVPNIRSVPANGS 148

Query: 119 TKPTYLRFLTGLKAYSQIFSRFAFGARRNR 30
            KPTY+RFLTG+KAYSQIFSRFAFGARRNR
Sbjct: 149 MKPTYIRFLTGIKAYSQIFSRFAFGARRNR 178


>ref|XP_002871122.1| short-chain dehydrogenase/reductase family protein [Arabidopsis
           lyrata subsp. lyrata] gi|297316959|gb|EFH47381.1|
           short-chain dehydrogenase/reductase family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 349

 Score =  157 bits (396), Expect = 1e-36
 Identities = 77/95 (81%), Positives = 88/95 (92%)
 Frame = -2

Query: 299 QDVKKVVVHNLSPGMVTTDLLMSGATTKQAKFFINVLAEPADVVAECLIPNIRSILSNGS 120
           QDVK VVVHNLSPGMVTTDLLMSGATTKQAKFFINVLAEPA+VVAE L+PNIR+I ++GS
Sbjct: 255 QDVKNVVVHNLSPGMVTTDLLMSGATTKQAKFFINVLAEPAEVVAEYLVPNIRAIPASGS 314

Query: 119 TKPTYLRFLTGLKAYSQIFSRFAFGARRNRYVLED 15
            KPTY+RFLTG+KAY++IFSR A GAR+NRYV E+
Sbjct: 315 MKPTYIRFLTGIKAYTKIFSRVALGARKNRYVTEE 349


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